#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2012317.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012317 loop_ _publ_author_name 'Evans, James M. B.' 'Kapitan, Anoop' 'Rosair, Georgina M.' 'Roberts, Kevin J.' 'White, Graeme' _publ_section_title ; Sodium phenoxyacetate hemihydrate ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1277 _journal_page_last 1278 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'Na 1+, C8 H7 O3 1-, 0.5H2 O1' _chemical_formula_moiety 'Na 1+, C8 H7 O3 1-, 0.5H2 O1' _chemical_formula_sum 'C8 H8 Na O3.5' _chemical_formula_weight 183.13 _chemical_name_systematic ; Sodium phenoxyacetate hemihydrate ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 98.02(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 34.149(11) _cell_length_b 7.654(3) _cell_length_c 6.144(2) _cell_measurement_reflns_used 32 _cell_measurement_temperature 160(2) _cell_measurement_theta_max 12.26 _cell_measurement_theta_min 5.33 _cell_volume 1590.2(10) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1996)' _computing_data_reduction 'SHELXTL (Bruker, 1999)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .997 _diffrn_measured_fraction_theta_max .997 _diffrn_measurement_device_type 'Bruker P4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0689 _diffrn_reflns_av_sigmaI/netI .0587 _diffrn_reflns_limit_h_max 1 _diffrn_reflns_limit_h_min -40 _diffrn_reflns_limit_k_max 1 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min -7 _diffrn_reflns_number 1719 _diffrn_reflns_theta_full 25.01 _diffrn_reflns_theta_max 25.01 _diffrn_reflns_theta_min 2.41 _diffrn_standards_decay_% none _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .164 _exptl_absorpt_correction_T_max .7917 _exptl_absorpt_correction_T_min .7187 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.530 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 760 _exptl_crystal_size_max .74 _exptl_crystal_size_mid .26 _exptl_crystal_size_min .05 _refine_diff_density_max .357 _refine_diff_density_min -.494 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.042 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 117 _refine_ls_number_reflns 1400 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.042 _refine_ls_R_factor_all .0674 _refine_ls_R_factor_gt .0520 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0816P)^2^+1.4634P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .1393 _reflns_number_gt 1127 _reflns_number_total 1400 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file gd1176.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'C 2/c' _[local]_cod_chemical_formula_sum_orig 'C8 H8 Na O3.50' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (13 times). '_geom_angle_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (15 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012317 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Na1 .46847(3) .17124(13) .03367(15) .0158(3) Uani d . 1 Na O1 .40157(5) .2474(2) .1427(3) .0191(5) Uani d . 1 O O2 .46095(5) .1196(2) .4207(3) .0176(4) Uani d . 1 O O3 .44708(5) .2918(3) .6954(3) .0193(5) Uani d . 1 O O4 .5000 .4255(4) .2500 .0225(6) Uani d S 1 O H4 .5200(9) .492(5) .247(5) .027 Uiso d . 1 H C2 .44134(7) .2340(3) .5031(4) .0142(5) Uani d . 1 C C3 .40562(7) .3153(3) .3616(4) .0165(6) Uani d . 1 C H3A .3814 .2896 .4273 .020 Uiso calc R 1 H H3B .4089 .4437 .3578 .020 Uiso calc R 1 H C10 .36439(7) .2537(3) .0232(4) .0149(5) Uani d . 1 C C11 .35837(8) .1527(3) -.1669(4) .0192(6) Uani d . 1 C H11A .3796 .0877 -.2116 .023 Uiso calc R 1 H C12 .32123(8) .1475(4) -.2904(4) .0239(6) Uani d . 1 C H12A .3171 .0784 -.4199 .029 Uiso calc R 1 H C13 .29003(8) .2417(4) -.2277(4) .0244(6) Uani d . 1 C H13A .2645 .2352 -.3115 .029 Uiso calc R 1 H C14 .29651(8) .3456(4) -.0413(4) .0225(6) Uani d . 1 C H14A .2753 .4118 .0014 .027 Uiso calc R 1 H C15 .33357(8) .3539(4) .0838(4) .0194(6) Uani d . 1 C H15A .3379 .4273 .2095 .023 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Na1 .0206(6) .0161(6) .0109(5) .0006(4) .0027(4) -.0010(4) O1 .0202(9) .0267(10) .0107(9) .0048(8) .0037(7) -.0033(8) O2 .0210(9) .0157(9) .0170(9) .0031(7) .0062(7) .0026(7) O3 .0238(10) .0225(10) .0114(9) -.0012(8) .0016(7) .0004(7) O4 .0324(15) .0138(14) .0232(14) .000 .0107(12) .000 C2 .0162(12) .0127(12) .0147(12) -.0044(10) .0060(10) .0021(10) C3 .0211(13) .0178(13) .0114(12) .0019(10) .0047(10) -.0009(10) C10 .0186(12) .0150(12) .0115(12) -.0019(10) .0035(9) .0036(10) C11 .0261(14) .0184(13) .0142(12) .0009(11) .0067(10) .0002(11) C12 .0325(15) .0264(15) .0128(13) -.0080(12) .0029(11) -.0013(11) C13 .0206(13) .0323(16) .0194(14) -.0057(12) -.0003(11) .0037(12) C14 .0214(13) .0254(15) .0218(14) .0026(11) .0067(11) .0036(12) C15 .0228(13) .0215(14) .0139(12) .0012(11) .0033(10) .0002(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Na Na .0362 .0249 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O3 Na1 O2 1_554 6 96.08(7) y O3 Na1 O2 1_554 2_655 110.87(7) y O2 Na1 O2 6 2_655 86.86(7) y O3 Na1 O2 1_554 . 151.19(7) y O2 Na1 O2 6 . 96.45(6) y O2 Na1 O2 2_655 . 95.65(7) y O3 Na1 O4 1_554 . 103.07(7) y O2 Na1 O4 6 . 156.46(7) y O2 Na1 O4 2_655 . 73.67(6) y O2 Na1 O4 . . 73.01(6) y O3 Na1 O1 1_554 . 87.83(7) y O2 Na1 O1 6 . 103.40(7) y O2 Na1 O1 2_655 . 157.84(7) y O2 Na1 O1 . . 64.04(6) y O4 Na1 O1 . . 91.01(6) y C10 O1 C3 . . 116.72(18) ? C10 O1 Na1 . . 131.72(14) ? C3 O1 Na1 . . 111.06(14) ? C2 O2 Na1 . 6_556 126.13(15) ? C2 O2 Na1 . 2_655 114.81(16) ? Na1 O2 Na1 6_556 2_655 93.14(7) ? C2 O2 Na1 . . 114.37(15) ? Na1 O2 Na1 6_556 . 114.75(8) ? Na1 O2 Na1 2_655 . 81.32(7) ? C2 O3 Na1 . 1_556 134.45(17) ? Na1 O4 Na1 . 2_655 78.48(10) ? Na1 O4 H4 . . 137(2) ? Na1 O4 H4 2_655 . 101(2) ? O3 C2 O2 . . 127.4(2) ? O3 C2 C3 . . 113.6(2) ? O2 C2 C3 . . 119.0(2) ? O1 C3 C2 . . 110.6(2) ? O1 C3 H3A . . 109.5 ? C2 C3 H3A . . 109.5 ? O1 C3 H3B . . 109.5 ? C2 C3 H3B . . 109.5 ? H3A C3 H3B . . 108.1 ? O1 C10 C11 . . 116.4(2) ? O1 C10 C15 . . 123.5(2) ? C11 C10 C15 . . 120.1(2) ? C12 C11 C10 . . 119.5(2) ? C12 C11 H11A . . 120.3 ? C10 C11 H11A . . 120.3 ? C11 C12 C13 . . 121.0(3) ? C11 C12 H12A . . 119.5 ? C13 C12 H12A . . 119.5 ? C12 C13 C14 . . 119.2(3) ? C12 C13 H13A . . 120.4 ? C14 C13 H13A . . 120.4 ? C13 C14 C15 . . 120.8(3) ? C13 C14 H14A . . 119.6 ? C15 C14 H14A . . 119.6 ? C14 C15 C10 . . 119.4(2) ? C14 C15 H15A . . 120.3 ? C10 C15 H15A . . 120.3 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Na1 O3 1_554 2.298(2) y Na1 O2 6 2.335(2) y Na1 O2 2_655 2.420(2) y Na1 O2 . 2.459(2) y Na1 O4 . 2.513(2) y Na1 O1 . 2.537(2) y Na1 Na1 2_655 3.179(2) y Na1 Na1 5_655 3.454(2) y Na1 Na1 6 4.0384(16) y O1 C10 . 1.376(3) y O1 C3 . 1.431(3) y O2 C2 . 1.251(3) y O3 C2 . 1.251(3) y O4 H4 . .85(3) ? C2 C3 . 1.528(3) ? C3 H3A . .9900 ? C3 H3B . .9900 ? C10 C11 . 1.392(4) ? C10 C15 . 1.394(4) ? C11 C12 . 1.385(4) ? C11 H11A . .9500 ? C12 C13 . 1.385(4) ? C12 H12A . .9500 ? C13 C14 . 1.387(4) ? C13 H13A . .9500 ? C14 C15 . 1.388(4) ? C14 H14A . .9500 ? C15 H15A . .9500 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O4 H4 O3 5_666 .85(3) 2.00(3) 2.809(3) 157(3) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion O3 Na1 O1 C10 1_554 . 33.2(2) O2 Na1 O1 C10 6 . -62.6(2) O2 Na1 O1 C10 2_655 . -178.4(2) O2 Na1 O1 C10 . . -153.3(2) O4 Na1 O1 C10 . . 136.2(2) Na1 Na1 O1 C10 2_655 . -175.07(19) Na1 Na1 O1 C10 5_655 . -86.3(2) Na1 Na1 O1 C10 6 . -29.5(2) Na1 Na1 O1 C10 6_556 . -125.5(2) O3 Na1 O1 C3 1_554 . -138.19(16) O2 Na1 O1 C3 6 . 126.07(16) O2 Na1 O1 C3 2_655 . 10.2(3) O2 Na1 O1 C3 . . 35.36(15) O4 Na1 O1 C3 . . -35.15(16) Na1 Na1 O1 C3 2_655 . 13.59(16) Na1 Na1 O1 C3 5_655 . 102.40(18) Na1 Na1 O1 C3 6 . 159.13(14) Na1 Na1 O1 C3 6_556 . 63.18(15) O3 Na1 O2 C2 1_554 . -25.2(3) O2 Na1 O2 C2 6 . -140.46(14) O2 Na1 O2 C2 2_655 . 132.08(16) O4 Na1 O2 C2 . . 61.08(16) O1 Na1 O2 C2 . . -38.66(16) Na1 Na1 O2 C2 2_655 . 113.38(18) Na1 Na1 O2 C2 5_655 . 174.80(16) Na1 Na1 O2 C2 6 . -142.46(15) Na1 Na1 O2 C2 6_556 . -157.2(2) O3 Na1 O2 Na1 1_554 6_556 131.95(14) O2 Na1 O2 Na1 6 6_556 16.70(13) O2 Na1 O2 Na1 2_655 6_556 -70.77(9) O4 Na1 O2 Na1 . 6_556 -141.76(9) O1 Na1 O2 Na1 . 6_556 118.50(10) Na1 Na1 O2 Na1 2_655 6_556 -89.47(8) Na1 Na1 O2 Na1 5_655 6_556 -28.04(10) Na1 Na1 O2 Na1 6 6_556 14.70(11) O3 Na1 O2 Na1 1_554 2_655 -138.58(13) O2 Na1 O2 Na1 6 2_655 106.17(7) O2 Na1 O2 Na1 2_655 2_655 18.70(9) O4 Na1 O2 Na1 . 2_655 -52.29(5) O1 Na1 O2 Na1 . 2_655 -152.04(7) Na1 Na1 O2 Na1 5_655 2_655 61.42(7) Na1 Na1 O2 Na1 6 2_655 104.16(5) Na1 Na1 O2 Na1 6_556 2_655 89.47(8) O3 Na1 O4 Na1 1_554 2_655 -159.36(7) O2 Na1 O4 Na1 6 2_655 -15.73(13) O2 Na1 O4 Na1 2_655 2_655 -51.12(5) O2 Na1 O4 Na1 . 2_655 50.23(5) O1 Na1 O4 Na1 . 2_655 112.64(6) Na1 Na1 O4 Na1 5_655 2_655 -41.18(4) Na1 Na1 O4 Na1 6 2_655 -92.96(10) Na1 Na1 O4 Na1 6_556 2_655 31.05(3) Na1 O3 C2 O2 1_556 . -35.7(4) Na1 O3 C2 C3 1_556 . 143.41(18) Na1 O2 C2 O3 6_556 . 62.3(3) Na1 O2 C2 O3 2_655 . -52.0(3) Na1 O2 C2 O3 . . -143.5(2) Na1 O2 C2 C3 6_556 . -116.7(2) Na1 O2 C2 C3 2_655 . 128.97(19) Na1 O2 C2 C3 . . 37.4(3) C10 O1 C3 C2 . . 156.0(2) Na1 O1 C3 C2 . . -31.3(2) O3 C2 C3 O1 . . 178.2(2) O2 C2 C3 O1 . . -2.6(3) C3 O1 C10 C11 . . -165.4(2) Na1 O1 C10 C11 . . 23.6(3) C3 O1 C10 C15 . . 14.5(3) Na1 O1 C10 C15 . . -156.49(19) O1 C10 C11 C12 . . 177.5(2) C15 C10 C11 C12 . . -2.4(4) C10 C11 C12 C13 . . .1(4) C11 C12 C13 C14 . . 1.5(4) C12 C13 C14 C15 . . -.9(4) C13 C14 C15 C10 . . -1.3(4) O1 C10 C15 C14 . . -176.9(2) C11 C10 C15 C14 . . 3.0(4)