#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2012811.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012811 loop_ _publ_author_name 'Lewis, Gareth R.' 'Blake, Alexander J.' _publ_section_title ; Aquachlorobis[4,4,5,5-tetramethyl-2-(2-pyridyl)-4,5-dihydro-1H-imidazol-1-oxyl 3-oxide-\k^2^O^1^,N^2^]nickel(II) nitrate methanol disolvate monohydrate ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m398 _journal_page_last m400 _journal_volume 58 _journal_year 2002 _chemical_formula_iupac '[Ni (C12 H16 N3 O2)2 Cl (H2 O)] N O3 , 2C H4 O , H2 O' _chemical_formula_moiety 'C24 H34 Cl N6 Ni O5 + , N O3 - , 2C H4 O , H2 O' _chemical_formula_sum 'C26 H44 Cl N7 Ni O11' _chemical_formula_weight 724.82 _chemical_name_systematic ; Aquachlorobis[4,4,5,5-tetramethyl-2-(2-pyridyl)-4,5-dihydro-1H-imidazol-1-oxyl 3-oxide-\k^2^O^1^,N^2^]nickel(II) nitrate methanol disolvate monohydrate ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90 _cell_angle_beta 115.267(5) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 16.892(5) _cell_length_b 20.624(6) _cell_length_c 10.854(3) _cell_measurement_reflns_used 436 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 27.35 _cell_measurement_theta_min 1.6 _cell_volume 3419.6(17) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction 'SAINT and SHELXTL (Bruker, 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXL97 and PLATON (Spek, 2001)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 1.00 _diffrn_measured_fraction_theta_max 1.00 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.050 _diffrn_reflns_av_sigmaI/netI 0.034 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 24 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 21522 _diffrn_reflns_theta_full 25.0 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.66 _diffrn_standards_decay_% none _exptl_absorpt_coefficient_mu 0.710 _exptl_absorpt_correction_T_max 0.895 _exptl_absorpt_correction_T_min 0.889 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SAINT; Bruker, 2001)' _exptl_crystal_colour 'dark red' _exptl_crystal_density_diffrn 1.408 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description cube _exptl_crystal_F_000 1528 _exptl_crystal_size_max 0.17 _exptl_crystal_size_mid 0.16 _exptl_crystal_size_min 0.16 _refine_diff_density_max 1.92 _refine_diff_density_min -0.48 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.072 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 230 _refine_ls_number_reflns 3014 _refine_ls_number_restraints 19 _refine_ls_restrained_S_all 1.142 _refine_ls_R_factor_all 0.076 _refine_ls_R_factor_gt 0.066 _refine_ls_shift/su_max 0.070 _refine_ls_shift/su_mean 0.009 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.1259P)^2^+7.0626P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.188 _refine_ls_wR_factor_ref 0.198 _reflns_number_gt 2467 _reflns_number_total 3014 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file gg1109.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M C2/c _[local]_cod_cif_authors_sg_Hall -C2yc _cod_database_code 2012811 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Ni1 0.5000 0.17793(3) 0.7500 0.0298(3) Uani d S 1 . . Ni Cl1 0.5000 0.06343(7) 0.7500 0.0335(4) Uani d S 1 . . Cl N1 0.6184(3) 0.17861(16) 0.9239(4) 0.0329(9) Uani d . 1 . . N N2 0.6361(2) 0.14542(17) 0.6754(3) 0.0317(8) Uani d . 1 . . N N3 0.7444(3) 0.0812(2) 0.7945(4) 0.0402(9) Uani d . 1 . . N O1 0.5734(2) 0.18721(14) 0.6437(3) 0.0352(7) Uani d . 1 . . O O2 0.8059(2) 0.05321(19) 0.8956(4) 0.0535(10) Uani d . 1 . . O O3 0.5000 0.2781(2) 0.7500 0.0566(14) Uani d SD 1 . . O H3A 0.486(5) 0.301(3) 0.807(6) 0.085 Uiso d D 1 . . H C1 0.6199(3) 0.2037(2) 1.0388(5) 0.0399(11) Uani d . 1 . . C H1 0.5666 0.2190 1.0378 0.048 Uiso calc R 1 . . H C2 0.6950(4) 0.2083(3) 1.1582(5) 0.0454(12) Uani d . 1 . . C H2 0.6927 0.2256 1.2376 0.054 Uiso calc R 1 . . H C3 0.7735(4) 0.1876(3) 1.1620(5) 0.0493(13) Uani d . 1 . . C H3 0.8263 0.1918 1.2427 0.059 Uiso calc R 1 . . H C4 0.7735(3) 0.1608(3) 1.0452(5) 0.0419(11) Uani d . 1 . . C H4 0.8263 0.1453 1.0444 0.050 Uiso calc R 1 . . H C5 0.6942(3) 0.1568(2) 0.9282(4) 0.0349(10) Uani d . 1 . . C C6 0.6916(3) 0.1287(2) 0.8018(5) 0.0332(10) Uani d . 1 . . C C7 0.6556(3) 0.1133(2) 0.5676(5) 0.0369(11) Uani d . 1 . . C C8 0.7153(3) 0.0568(2) 0.6513(5) 0.0420(11) Uani d . 1 . . C C9 0.5702(3) 0.0933(3) 0.4502(5) 0.0486(13) Uani d . 1 . . C H9A 0.5357 0.0672 0.4850 0.073 Uiso calc R 1 . . H H9B 0.5828 0.0678 0.3845 0.073 Uiso calc R 1 . . H H9C 0.5370 0.1322 0.4052 0.073 Uiso calc R 1 . . H C10 0.7030(4) 0.1646(3) 0.5217(5) 0.0486(13) Uani d . 1 . . C H10A 0.6656 0.2030 0.4885 0.073 Uiso calc R 1 . . H H10B 0.7158 0.1469 0.4484 0.073 Uiso calc R 1 . . H H10C 0.7579 0.1768 0.5988 0.073 Uiso calc R 1 . . H C11 0.6665(4) -0.0069(3) 0.6435(6) 0.0530(14) Uani d . 1 . . C H11A 0.7054 -0.0371 0.7123 0.079 Uiso calc R 1 . . H H11B 0.6480 -0.0260 0.5527 0.079 Uiso calc R 1 . . H H11C 0.6150 0.0018 0.6604 0.079 Uiso calc R 1 . . H C12 0.7958(4) 0.0447(3) 0.6252(6) 0.0574(15) Uani d . 1 . . C H12A 0.8303 0.0846 0.6420 0.086 Uiso calc R 1 . . H H12B 0.7774 0.0311 0.5304 0.086 Uiso calc R 1 . . H H12C 0.8316 0.0105 0.6863 0.086 Uiso calc R 1 . . H C13 0.4778(8) 0.4133(6) 0.9496(12) 0.054(3) Uiso d P 0.50 A -1 C H13A 0.4792 0.4239 1.0386 0.081 Uiso calc PR 0.50 A -1 H H13B 0.4210 0.4259 0.8774 0.081 Uiso calc PR 0.50 A -1 H H13C 0.5245 0.4369 0.9380 0.081 Uiso calc PR 0.50 A -1 H O4 0.4899(8) 0.3479(5) 0.9425(10) 0.071(3) Uiso d PD 0.50 A -1 O H4A 0.5431 0.3404 0.9639 0.107 Uiso calc PRD 0.50 A -1 H C14 0.4301(10) 0.3988(7) 0.9525(14) 0.067(3) Uiso d P 0.50 B -2 C H14A 0.4730 0.4152 1.0405 0.100 Uiso calc PR 0.50 B -2 H H14B 0.3720 0.3976 0.9524 0.100 Uiso calc PR 0.50 B -2 H H14C 0.4286 0.4273 0.8794 0.100 Uiso calc PR 0.50 B -2 H O5 0.4529(5) 0.3383(4) 0.9322(8) 0.0427(18) Uiso d PD 0.50 B -2 O H5A 0.4717 0.3176 1.0059 0.064 Uiso calc PRD 0.50 B -2 H O6 0.4930(10) 0.4417(7) 0.8313(15) 0.113(4) Uiso d PD 0.50 C -3 O H6A 0.454(9) 0.431(11) 0.736(12) 0.169 Uiso d PD 0.50 D -3 H H6B 0.488(14) 0.492(5) 0.84(2) 0.169 Uiso d PD 0.50 E -3 H N4 0.5000 0.2864(3) 0.2500 0.0630(18) Uiso d SD 1 . . N O7A 0.4709(11) 0.2609(8) 0.1369(12) 0.055(4) Uiso d PD 0.25 F -1 O O7B 0.4419(10) 0.3006(9) 0.2937(18) 0.062(4) Uiso d PD 0.25 F -1 O O7C 0.5750(7) 0.2986(11) 0.3186(19) 0.171(18) Uiso d PD 0.25 F -1 O O7F 0.5580(9) 0.2904(8) 0.3742(10) 0.049(4) Uiso d PD 0.25 F -2 O O7E 0.5238(14) 0.2657(13) 0.1669(15) 0.136(11) Uiso d PD 0.25 F -2 O O7D 0.4264(7) 0.3037(10) 0.226(2) 0.096(8) Uiso d PD 0.25 F -2 O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 0.0368(5) 0.0254(5) 0.0257(5) 0.000 0.0120(3) 0.000 Cl1 0.0375(8) 0.0250(7) 0.0358(8) 0.000 0.0135(7) 0.000 N1 0.042(2) 0.0276(18) 0.0294(19) -0.0077(16) 0.0154(17) -0.0032(14) N2 0.035(2) 0.0300(19) 0.0293(19) -0.0029(16) 0.0129(16) -0.0006(15) N3 0.037(2) 0.044(2) 0.037(2) 0.0016(18) 0.0135(18) 0.0032(18) O1 0.0423(18) 0.0308(16) 0.0330(17) 0.0044(14) 0.0167(14) 0.0037(13) O2 0.044(2) 0.067(2) 0.044(2) 0.0186(18) 0.0129(17) 0.0147(18) O3 0.094(4) 0.026(2) 0.073(4) 0.000 0.058(3) 0.000 C1 0.050(3) 0.037(2) 0.034(2) -0.011(2) 0.020(2) -0.005(2) C2 0.057(3) 0.047(3) 0.030(2) -0.018(2) 0.016(2) -0.006(2) C3 0.050(3) 0.056(3) 0.032(3) -0.021(3) 0.008(2) 0.001(2) C4 0.040(3) 0.049(3) 0.033(3) -0.010(2) 0.012(2) 0.004(2) C5 0.038(2) 0.034(2) 0.031(2) -0.011(2) 0.013(2) 0.0014(18) C6 0.033(2) 0.034(2) 0.032(2) -0.0023(18) 0.0132(19) 0.0037(18) C7 0.043(3) 0.038(2) 0.031(2) -0.002(2) 0.017(2) -0.0076(19) C8 0.044(3) 0.042(3) 0.041(3) 0.005(2) 0.019(2) -0.002(2) C9 0.050(3) 0.050(3) 0.037(3) 0.002(2) 0.011(2) -0.012(2) C10 0.058(3) 0.053(3) 0.042(3) 0.000(3) 0.028(3) 0.004(2) C11 0.059(3) 0.039(3) 0.060(3) 0.005(2) 0.024(3) 0.001(2) C12 0.053(3) 0.066(4) 0.056(3) 0.017(3) 0.025(3) 0.003(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle _geom_angle_publ_flag O1 Ni1 O1 2_656 169.19(17) no O1 Ni1 O3 . 84.59(8) yes O1 Ni1 N1 2_656 93.88(14) no O1 Ni1 N1 . 86.05(14) yes O3 Ni1 N1 . 89.61(9) yes O1 Ni1 Cl1 . 95.41(8) yes N1 Ni1 Cl1 . 90.39(9) yes C5 N1 C1 . 117.3(4) no C5 N1 Ni1 . 124.3(3) no C1 N1 Ni1 . 118.4(3) no O1 N2 C6 . 125.6(4) no O1 N2 C7 . 121.0(3) no C6 N2 C7 . 113.3(4) no O2 N3 C6 . 126.3(4) no O2 N3 C8 . 121.4(4) no C6 N3 C8 . 111.8(4) no N2 O1 Ni1 . 114.5(2) yes Ni1 O3 H3A . 122(5) no N1 C1 C2 . 123.1(5) no N1 C1 H1 . 118.4 no C2 C1 H1 . 118.4 no C3 C2 C1 . 119.7(5) no C3 C2 H2 . 120.1 no C1 C2 H2 . 120.1 no C2 C3 C4 . 118.3(5) no C2 C3 H3 . 120.9 no C4 C3 H3 . 120.9 no C3 C4 C5 . 118.7(5) no C3 C4 H4 . 120.7 no C5 C4 H4 . 120.7 no N1 C5 C4 . 122.8(4) no N1 C5 C6 . 116.9(4) no C4 C5 C6 . 120.3(4) no N2 C6 N3 . 108.6(4) no N2 C6 C5 . 125.8(4) no N3 C6 C5 . 125.6(4) no N2 C7 C9 . 109.2(4) no N2 C7 C10 . 105.6(4) no C9 C7 C10 . 110.8(4) no N2 C7 C8 . 100.3(4) no C9 C7 C8 . 115.7(4) no C10 C7 C8 . 114.1(4) no N3 C8 C12 . 108.9(4) no N3 C8 C11 . 106.0(4) no C12 C8 C11 . 110.5(4) no N3 C8 C7 . 101.3(4) no C12 C8 C7 . 115.0(4) no C11 C8 C7 . 114.2(4) no C7 C9 H9A . 109.5 no C7 C9 H9B . 109.5 no H9A C9 H9B . 109.5 no C7 C9 H9C . 109.5 no H9A C9 H9C . 109.5 no H9B C9 H9C . 109.5 no C7 C10 H10A . 109.4 no C7 C10 H10B . 109.5 no H10A C10 H10B . 109.5 no C7 C10 H10C . 109.5 no H10A C10 H10C . 109.5 no H10B C10 H10C . 109.5 no C8 C11 H11A . 109.5 no C8 C11 H11B . 109.5 no H11A C11 H11B . 109.5 no C8 C11 H11C . 109.5 no H11A C11 H11C . 109.5 no H11B C11 H11C . 109.5 no C8 C12 H12A . 109.4 no C8 C12 H12B . 109.5 no H12A C12 H12B . 109.5 no C8 C12 H12C . 109.5 no H12A C12 H12C . 109.5 no H12B C12 H12C . 109.5 no C13 O4 H4A . 109.6 no O5 C14 H14A . 109.5 no O5 C14 H14B . 109.7 no H14A C14 H14B . 109.2 no O5 C14 H14C . 109.9 no H14A C14 H14C . 109.3 no H14B C14 H14C . 109.2 no C14 O5 H5A . 109.7 no H6A O6 H6B . 107(10) no O7E N4 O7D . 125.7(9) no O7C N4 O7A . 125.5(8) no O7E N4 O7F . 117.1(8) no O7D N4 O7F . 117.2(8) no O7C N4 O7B . 119.7(8) no O7A N4 O7B . 114.9(7) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Ni1 O1 2_656 2.032(3) no Ni1 O1 . 2.032(3) yes Ni1 O3 . 2.067(5) yes Ni1 N1 . 2.083(4) yes Ni1 N1 2_656 2.083(4) no Ni1 Cl1 . 2.3614(17) yes N1 C5 . 1.338(6) no N1 C1 . 1.341(6) no N2 O1 . 1.292(5) yes N2 C6 . 1.335(6) yes N2 C7 . 1.498(6) no N3 O2 . 1.282(5) yes N3 C6 . 1.349(6) yes N3 C8 . 1.503(6) no O3 H3A . 0.89(7) no C1 C2 . 1.376(7) no C1 H1 . 0.9500 no C2 C3 . 1.376(8) no C2 H2 . 0.9500 no C3 C4 . 1.383(8) no C3 H3 . 0.9500 no C4 C5 . 1.401(7) no C4 H4 . 0.9500 no C5 C6 . 1.473(6) no C7 C9 . 1.519(7) no C7 C10 . 1.533(7) no C7 C8 . 1.555(7) no C8 C12 . 1.524(7) no C8 C11 . 1.534(7) no C9 H9A . 0.9800 no C9 H9B . 0.9800 no C9 H9C . 0.9800 no C10 H10A . 0.9800 no C10 H10B . 0.9800 no C10 H10C . 0.9800 no C11 H11A . 0.9800 no C11 H11B . 0.9800 no C11 H11C . 0.9800 no C12 H12A . 0.9800 no C12 H12B . 0.9800 no C12 H12C . 0.9800 no C13 O4 . 1.373(16) no C13 H13A . 0.9802 no C13 H13B . 0.9802 no C13 H13C . 0.9802 no O4 H4A . 0.8400 no C14 O5 . 1.351(15) no C14 H14A . 0.9821 no C14 H14B . 0.9821 no C14 H14C . 0.9822 no O5 H5A . 0.8400 no O6 H6A . 0.98(7) no O6 H6B . 1.05(9) no N4 O7C . 1.190(10) no N4 O7E . 1.211(10) no N4 O7D . 1.212(10) no N4 O7A . 1.230(9) no N4 O7F . 1.287(9) no N4 O7B . 1.292(9) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H3A O4 . 0.89(7) 1.733(7) 2.603(3) 164(2) yes O3 H3A O5 . 0.89(7) 1.838(7) 2.726(3) 173(2) yes O5 H5A O7A 1_556 0.84 1.85 2.646(4) 159 yes O5 H5A O7E 1_556 0.84 1.91 2.749(4) 173 yes