#------------------------------------------------------------------------------ #$Date: 2013-08-29 16:37:19 +0100 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/30/2013000.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2013000 loop_ _publ_author_name 'Kim, Jinkwon' 'Han, Sujin' _publ_section_title trans-Bis(isothiocyanato-\kN)bis(methanol-\kO)bis[2,4,6-tri(4-pyridyl)-1,3,5-triazine-\kN^2^]manganese(II) _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m521 _journal_page_last m522 _journal_volume 58 _journal_year 2002 _chemical_formula_iupac '[Mn (NCS)2 (C18 H12 N6)2 (CH4 O)2]' _chemical_formula_moiety 'C40 H32 Mn N14 O2 S2' _chemical_formula_sum 'C40 H32 Mn N14 O2 S2' _chemical_formula_weight 859.86 _chemical_name_systematic ; trans-Bis(isothiocyanato-\kN)bis(methanol-\kO)bis[2,4,6-tri(4-pyridyl)- 1,3,5-triazine-\kN^4^]manganese(II) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 106.54(2) _cell_angle_beta 100.60(2) _cell_angle_gamma 100.93(3) _cell_formula_units_Z 1 _cell_length_a 8.871(2) _cell_length_b 8.875(2) _cell_length_c 14.161(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 29 _cell_measurement_theta_min 23 _cell_volume 1015.3(5) _computing_cell_refinement 'CELDIM (Enraf-Nonius, 1996)' _computing_data_collection 'MACH3 (Enraf-Nonius, 1996)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \q/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.015 _diffrn_reflns_av_sigmaI/netI 0.029 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3732 _diffrn_reflns_theta_full 24.97 _diffrn_reflns_theta_max 24.97 _diffrn_reflns_theta_min 2.42 _diffrn_standards_decay_% none _diffrn_standards_interval_time 120 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.483 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.406 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 443 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.17 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.33 _refine_diff_density_min -0.40 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.012 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 268 _refine_ls_number_reflns 3571 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.012 _refine_ls_R_factor_all 0.069 _refine_ls_R_factor_gt 0.049 _refine_ls_shift/su_max 0.028 _refine_ls_shift/su_mean 0.003 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0374P)^2^+1.8244P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.122 _refine_ls_wR_factor_ref 0.132 _reflns_number_gt 2796 _reflns_number_total 3571 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ob1080.cif _[local]_cod_data_source_block I _cod_original_cell_volume 1015.3(4) _cod_database_code 2013000 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Mn 0.0000 0.5000 0.5000 0.0432(2) Uani d S 1 . . Mn S1 0.47224(15) 0.94996(17) 0.64967(12) 0.1000(5) Uani d . 1 . . S O1 0.1548(3) 0.3334(3) 0.50854(18) 0.0533(6) Uani d . 1 . . O N1 0.0756(3) 0.5107(3) 0.3506(2) 0.0449(7) Uani d . 1 . . N N2 -0.0462(4) -0.0343(4) -0.3631(2) 0.0521(8) Uani d . 1 . . N N3 0.7438(4) 0.9846(4) -0.0133(3) 0.0675(10) Uani d . 1 . . N N4 0.1260(3) 0.3744(3) -0.00988(19) 0.0387(6) Uani d . 1 . . N N5 0.2930(3) 0.4871(3) -0.0984(2) 0.0394(6) Uani d . 1 . . N N6 0.3276(3) 0.6188(3) 0.0776(2) 0.0393(6) Uani d . 1 . . N N7 0.1939(4) 0.7064(4) 0.5872(2) 0.0578(9) Uani d . 1 . . N C1 0.2076(4) 0.4987(4) 0.0733(2) 0.0363(7) Uani d . 1 . . C C2 0.1639(4) 0.5025(4) 0.1700(2) 0.0370(7) Uani d . 1 . . C C3 0.2435(4) 0.6251(4) 0.2606(2) 0.0469(9) Uani d . 1 . . C H3 0.3276 0.7073 0.2624 0.056 Uiso calc R 1 . . H C4 0.1969(4) 0.6243(4) 0.3480(3) 0.0502(9) Uani d . 1 . . C H4 0.2526 0.7069 0.4085 0.060 Uiso calc R 1 . . H C5 0.0011(4) 0.3934(4) 0.2626(3) 0.0478(9) Uani d . 1 . . C H5 -0.0825 0.3125 0.2628 0.057 Uiso calc R 1 . . H C6 0.0389(4) 0.3835(4) 0.1717(2) 0.0447(8) Uani d . 1 . . C H6 -0.0180 0.2987 0.1125 0.054 Uiso calc R 1 . . H C7 0.1752(4) 0.3728(4) -0.0934(2) 0.0367(7) Uani d . 1 . . C C8 0.0955(4) 0.2325(4) -0.1874(2) 0.0372(7) Uani d . 1 . . C C9 -0.0346(4) 0.1154(4) -0.1909(3) 0.0475(9) Uani d . 1 . . C H9 -0.0767 0.1241 -0.1347 0.057 Uiso calc R 1 . . H C10 -0.1004(5) -0.0139(5) -0.2793(3) 0.0555(10) Uani d . 1 . . C H10 -0.1879 -0.0922 -0.2811 0.067 Uiso calc R 1 . . H C11 0.0791(5) 0.0787(4) -0.3582(3) 0.0535(10) Uani d . 1 . . C H11 0.1203 0.0662 -0.4149 0.064 Uiso calc R 1 . . H C12 0.1514(4) 0.2139(4) -0.2733(3) 0.0497(9) Uani d . 1 . . C H12 0.2371 0.2919 -0.2741 0.060 Uiso calc R 1 . . H C13 0.3636(4) 0.6082(4) -0.0108(2) 0.0360(7) Uani d . 1 . . C C14 0.4958(4) 0.7385(4) -0.0122(3) 0.0406(8) Uani d . 1 . . C C15 0.5396(5) 0.7360(5) -0.1013(3) 0.0547(10) Uani d . 1 . . C H15 0.4874 0.6531 -0.1623 0.066 Uiso calc R 1 . . H C16 0.6650(5) 0.8621(6) -0.0966(4) 0.0684(12) Uani d . 1 . . C H16 0.6950 0.8596 -0.1565 0.082 Uiso calc R 1 . . H C17 0.6980(5) 0.9843(5) 0.0704(4) 0.0600(11) Uani d . 1 . . C H17 0.7511 1.0698 0.1300 0.072 Uiso calc R 1 . . H C18 0.5770(4) 0.8658(4) 0.0755(3) 0.0465(8) Uani d . 1 . . C H18 0.5508 0.8718 0.1369 0.056 Uiso calc R 1 . . H C19 0.3104(4) 0.8081(4) 0.6145(3) 0.0489(9) Uani d . 1 . . C C20 0.3237(5) 0.3697(6) 0.5338(4) 0.0860(15) Uani d . 1 . . C H20A 0.3565 0.2719 0.5312 0.129 Uiso calc R 1 . . H H20B 0.3655 0.4472 0.6012 0.129 Uiso calc R 1 . . H H20C 0.3627 0.4144 0.4861 0.129 Uiso calc R 1 . . H HO1 0.1106 0.2263 0.4600 0.070 Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Mn 0.0467(4) 0.0380(4) 0.0323(4) -0.0092(3) 0.0170(3) 0.0012(3) S1 0.0584(7) 0.0829(9) 0.1141(11) -0.0299(7) 0.0238(7) -0.0047(8) O1 0.0539(15) 0.0430(14) 0.0493(14) -0.0024(11) 0.0150(12) 0.0031(11) N1 0.0499(17) 0.0417(15) 0.0356(15) -0.0031(13) 0.0169(13) 0.0070(12) N2 0.062(2) 0.0448(17) 0.0392(16) 0.0033(15) 0.0156(14) 0.0031(13) N3 0.056(2) 0.056(2) 0.100(3) 0.0045(17) 0.031(2) 0.038(2) N4 0.0396(15) 0.0407(15) 0.0323(14) 0.0026(12) 0.0143(12) 0.0086(12) N5 0.0392(15) 0.0401(15) 0.0392(15) 0.0049(12) 0.0163(12) 0.0132(12) N6 0.0403(15) 0.0364(14) 0.0381(15) 0.0009(12) 0.0159(12) 0.0100(12) N7 0.061(2) 0.0466(18) 0.0457(18) -0.0127(16) 0.0201(15) -0.0017(14) C1 0.0357(17) 0.0384(17) 0.0350(17) 0.0079(14) 0.0130(13) 0.0109(14) C2 0.0389(17) 0.0358(17) 0.0355(17) 0.0048(14) 0.0166(14) 0.0092(13) C3 0.047(2) 0.0432(19) 0.0399(19) -0.0082(15) 0.0160(15) 0.0076(15) C4 0.056(2) 0.047(2) 0.0348(18) -0.0079(17) 0.0161(16) 0.0051(15) C5 0.050(2) 0.0443(19) 0.0388(18) -0.0087(16) 0.0218(16) 0.0056(15) C6 0.049(2) 0.0403(18) 0.0334(17) -0.0049(15) 0.0136(15) 0.0040(14) C7 0.0347(16) 0.0369(17) 0.0377(17) 0.0066(13) 0.0140(14) 0.0096(14) C8 0.0407(18) 0.0374(17) 0.0310(16) 0.0057(14) 0.0094(14) 0.0099(13) C9 0.047(2) 0.048(2) 0.0419(19) 0.0020(16) 0.0203(16) 0.0064(16) C10 0.050(2) 0.051(2) 0.051(2) -0.0069(17) 0.0184(17) 0.0037(17) C11 0.065(2) 0.054(2) 0.0323(18) -0.0005(19) 0.0197(17) 0.0068(16) C12 0.055(2) 0.047(2) 0.0406(19) -0.0025(17) 0.0181(16) 0.0112(16) C13 0.0351(16) 0.0377(17) 0.0367(17) 0.0070(13) 0.0134(13) 0.0136(14) C14 0.0388(18) 0.0378(17) 0.051(2) 0.0079(14) 0.0188(15) 0.0195(15) C15 0.060(2) 0.050(2) 0.059(2) 0.0075(18) 0.0312(19) 0.0209(18) C16 0.074(3) 0.069(3) 0.084(3) 0.016(2) 0.049(3) 0.041(3) C17 0.048(2) 0.043(2) 0.081(3) -0.0017(17) 0.009(2) 0.023(2) C18 0.0418(19) 0.0435(19) 0.053(2) 0.0026(15) 0.0125(16) 0.0187(16) C19 0.051(2) 0.048(2) 0.0358(18) -0.0002(18) 0.0157(16) 0.0008(15) C20 0.057(3) 0.072(3) 0.109(4) -0.002(2) 0.018(3) 0.013(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Mn N7 . 2.139(3) yes Mn N7 2_566 2.139(3) ? Mn O1 2_566 2.213(3) ? Mn O1 . 2.213(3) yes Mn N1 2_566 2.355(3) ? Mn N1 . 2.355(3) yes S1 C19 . 1.609(4) yes O1 C20 . 1.425(5) yes O1 HO1 . 0.9578 ? N1 C5 . 1.331(4) ? N1 C4 . 1.342(4) ? N2 C11 . 1.325(5) ? N2 C10 . 1.338(5) ? N3 C16 . 1.320(6) ? N3 C17 . 1.321(5) ? N4 C1 . 1.331(4) ? N4 C7 . 1.332(4) ? N5 C13 . 1.337(4) ? N5 C7 . 1.339(4) ? N6 C13 . 1.330(4) ? N6 C1 . 1.335(4) ? N7 C19 . 1.155(4) yes C1 C2 . 1.484(4) ? C2 C3 . 1.381(4) ? C2 C6 . 1.388(4) ? C3 C4 . 1.377(5) ? C3 H3 . 0.9300 ? C4 H4 . 0.9300 ? C5 C6 . 1.372(4) ? C5 H5 . 0.9300 ? C6 H6 . 0.9300 ? C7 C8 . 1.482(4) ? C8 C12 . 1.375(5) ? C8 C9 . 1.382(4) ? C9 C10 . 1.373(5) ? C9 H9 . 0.9300 ? C10 H10 . 0.9300 ? C11 C12 . 1.378(5) ? C11 H11 . 0.9300 ? C12 H12 . 0.9300 ? C13 C14 . 1.490(4) ? C14 C18 . 1.379(5) ? C14 C15 . 1.383(5) ? C15 C16 . 1.398(5) ? C15 H15 . 0.9300 ? C16 H16 . 0.9300 ? C17 C18 . 1.381(5) ? C17 H17 . 0.9300 ? C18 H18 . 0.9300 ? C20 H20A . 0.9600 ? C20 H20B . 0.9600 ? C20 H20C . 0.9600 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Mn Mn 0.3368 0.7283 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag N7 Mn N7 . 2_566 180.0 ? N7 Mn O1 . 2_566 88.97(12) ? N7 Mn O1 2_566 2_566 91.03(12) ? N7 Mn O1 . . 91.03(12) yes N7 Mn O1 2_566 . 88.97(12) ? O1 Mn O1 2_566 . 180.0000(10) ? N7 Mn N1 . 2_566 90.43(11) ? N7 Mn N1 2_566 2_566 89.57(11) ? O1 Mn N1 2_566 2_566 86.55(10) ? O1 Mn N1 . 2_566 93.45(10) ? N7 Mn N1 . . 89.57(11) yes N7 Mn N1 2_566 . 90.43(11) ? O1 Mn N1 2_566 . 93.45(10) ? O1 Mn N1 . . 86.55(10) yes N1 Mn N1 2_566 . 180.0000(10) ? C20 O1 Mn . . 128.8(3) yes C20 O1 HO1 . . 110.2 ? Mn O1 HO1 . . 113.6 ? C5 N1 C4 . . 116.1(3) ? C5 N1 Mn . . 119.5(2) ? C4 N1 Mn . . 124.3(2) ? C11 N2 C10 . . 116.6(3) ? C16 N3 C17 . . 116.0(3) ? C1 N4 C7 . . 114.8(3) ? C13 N5 C7 . . 115.0(3) ? C13 N6 C1 . . 114.6(3) ? C19 N7 Mn . . 164.5(3) yes N4 C1 N6 . . 125.6(3) ? N4 C1 C2 . . 117.3(3) ? N6 C1 C2 . . 117.0(3) ? C3 C2 C6 . . 117.8(3) ? C3 C2 C1 . . 121.6(3) ? C6 C2 C1 . . 120.6(3) ? C2 C3 C4 . . 119.3(3) ? C2 C3 H3 . . 120.3 ? C4 C3 H3 . . 120.3 ? N1 C4 C3 . . 123.5(3) ? N1 C4 H4 . . 118.2 ? C3 C4 H4 . . 118.3 ? N1 C5 C6 . . 124.6(3) ? N1 C5 H5 . . 117.7 ? C6 C5 H5 . . 117.7 ? C5 C6 C2 . . 118.6(3) ? C5 C6 H6 . . 120.7 ? C2 C6 H6 . . 120.7 ? N4 C7 N5 . . 124.9(3) ? N4 C7 C8 . . 117.5(3) ? N5 C7 C8 . . 117.6(3) ? C12 C8 C9 . . 118.1(3) ? C12 C8 C7 . . 120.6(3) ? C9 C8 C7 . . 121.3(3) ? C10 C9 C8 . . 118.5(3) ? C10 C9 H9 . . 120.8 ? C8 C9 H9 . . 120.8 ? N2 C10 C9 . . 124.0(3) ? N2 C10 H10 . . 118.0 ? C9 C10 H10 . . 118.0 ? N2 C11 C12 . . 123.4(3) ? N2 C11 H11 . . 118.3 ? C12 C11 H11 . . 118.3 ? C11 C12 C8 . . 119.3(3) ? C11 C12 H12 . . 120.3 ? C8 C12 H12 . . 120.3 ? N6 C13 N5 . . 125.1(3) ? N6 C13 C14 . . 117.8(3) ? N5 C13 C14 . . 117.1(3) ? C18 C14 C15 . . 118.2(3) ? C18 C14 C13 . . 120.7(3) ? C15 C14 C13 . . 121.1(3) ? C14 C15 C16 . . 117.9(4) ? C14 C15 H15 . . 121.1 ? C16 C15 H15 . . 121.1 ? N3 C16 C15 . . 124.6(4) ? N3 C16 H16 . . 117.7 ? C15 C16 H16 . . 117.7 ? N3 C17 C18 . . 124.7(4) ? N3 C17 H17 . . 117.7 ? C18 C17 H17 . . 117.7 ? C14 C18 C17 . . 118.6(4) ? C14 C18 H18 . . 120.7 ? C17 C18 H18 . . 120.7 ? N7 C19 S1 . . 178.5(3) yes O1 C20 H20A . . 109.5 ? O1 C20 H20B . . 109.5 ? H20A C20 H20B . . 109.5 ? O1 C20 H20C . . 109.5 ? H20A C20 H20C . . 109.5 ? H20B C20 H20C . . 109.5 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O1 HO1 N2 2_555 0.96 1.77 2.721(4) 173 yes _cod_database_fobs_code 2013000