#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/37/2103784.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2103784 loop_ _publ_author_name 'Clemente, Dore Augusto' 'Marzotto, Armando' _publ_section_title ; 22 Space-group changes ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 43 _journal_page_last 50 _journal_volume 59 _journal_year 2003 _chemical_formula_sum 'C24 N14 Ni O24.5 P2' _chemical_formula_weight 997.01 _chemical_name_systematic ; Diaqua-(ethylenediamine-N,N')-bis(guanosine 5'-monophosphate-N$7!)-nickel ethylenediamine hydrate ; _space_group_IT_number 20 _symmetry_space_group_name_Hall 'C 2c 2' _symmetry_space_group_name_H-M 'C 2 2 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 17.462(2) _cell_length_b 17.337(2) _cell_length_c 28.417(2) _cell_measurement_temperature 293(2) _cell_volume 8602.9(15) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.395 _diffrn_measured_fraction_theta_max 0.395 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0418 _diffrn_reflns_av_sigmaI/netI 0.0608 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 20 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 14536 _diffrn_reflns_theta_full 27.14 _diffrn_reflns_theta_max 27.14 _diffrn_reflns_theta_min 1.43 _exptl_absorpt_coefficient_mu 0.626 _exptl_crystal_density_diffrn 1.540 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 3968 _refine_diff_density_max 0.157 _refine_diff_density_min -0.207 _refine_diff_density_rms 0.009 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.010(5) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.300 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 267 _refine_ls_number_reflns 3648 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.300 _refine_ls_R_factor_all 0.0058 _refine_ls_R_factor_gt 0.0056 _refine_ls_shift/su_max 0.880 _refine_ls_shift/su_mean 0.003 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1000P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0379 _refine_ls_wR_factor_ref 0.0388 _reflns_number_gt 3605 _reflns_number_total 3648 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file an0613.cif _[local]_cod_data_source_block sazpak _[local]_cod_chemical_formula_sum_orig 'C24 N14 Ni O24.50 P2' _cod_original_cell_volume 8603.1(15) _cod_database_code 2103784 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' 'x, -y, -z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, -y+1/2, z+1/2' 'x+1/2, -y+1/2, -z' '-x+1/2, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Ni1 Ni 0.298650(15) 0.0000 0.0000 0.02000(8) Uiso 1 2 d S P1 P 0.23220(2) 0.29400(2) 0.00420(2) 0.02000(10) Uiso 1 1 d . O1 O 0.30327(5) 0.10173(5) -0.04095(5) 0.0200(2) Uiso 1 1 d . O3 O 0.45785(6) -0.12660(6) 0.03725(5) 0.0200(2) Uiso 1 1 d . O4 O 0.42922(6) 0.25003(6) 0.10735(5) 0.0200(3) Uiso 1 1 d . O5 O 0.50230(6) 0.36440(5) 0.01020(4) 0.0200(2) Uiso 1 1 d . O6 O 0.59385(6) 0.29415(6) 0.07580(5) 0.0200(2) Uiso 1 1 d . O7 O 0.30607(5) 0.27387(6) 0.03695(5) 0.0200(2) Uiso 1 1 d . O8 O 0.16992(5) 0.31813(6) 0.03810(5) 0.0200(2) Uiso 1 1 d . O9 O 0.21407(6) 0.21787(5) -0.01960(4) 0.0200(2) Uiso 1 1 d . O10 O 0.25460(6) 0.35565(5) -0.02945(5) 0.0200(2) Uiso 1 1 d . N1 N 0.20748(7) 0.04338(7) 0.04070(6) 0.0200(3) Uiso 1 1 d . N3 N 0.38678(7) 0.03948(7) 0.04695(6) 0.0200(3) Uiso 1 1 d . N4 N 0.56972(7) -0.06397(7) 0.05040(6) 0.0200(3) Uiso 1 1 d . N5 N 0.68965(7) -0.01035(7) 0.06060(6) 0.0200(3) Uiso 1 1 d . N6 N 0.58475(7) 0.06510(7) 0.07595(6) 0.0200(3) Uiso 1 1 d . N7 N 0.46355(7) 0.13165(7) 0.07635(6) 0.0200(3) Uiso 1 1 d . C1 C 0.13870(8) 0.00740(8) 0.02415(6) 0.0200(4) Uiso 1 1 d . C3 C 0.45938(9) 0.00928(9) 0.05435(7) 0.0200(4) Uiso 1 1 d . C4 C 0.48853(9) -0.06447(8) 0.04705(7) 0.0200(4) Uiso 1 1 d . C5 C 0.61263(8) -0.00117(9) 0.06260(7) 0.0200(3) Uiso 1 1 d . C6 C 0.50773(9) 0.06693(8) 0.07015(7) 0.0200(4) Uiso 1 1 d . C7 C 0.39065(9) 0.11185(8) 0.06105(7) 0.0200(4) Uiso 1 1 d . C8 C 0.49200(9) 0.20405(8) 0.09200(7) 0.0200(3) Uiso 1 1 d . C9 C 0.42228(8) 0.31842(8) 0.07590(7) 0.0200(3) Uiso 1 1 d . C10 C 0.46997(8) 0.29792(8) 0.03315(7) 0.0200(4) Uiso 1 1 d . C11 C 0.53510(8) 0.24885(8) 0.05325(7) 0.0200(3) Uiso 1 1 d . C12 C 0.33885(9) 0.33100(8) 0.06725(7) 0.0200(4) Uiso 1 1 d . Ni2 Ni 0.5000 0.225350(14) 0.2500 0.02000(8) Uiso 1 2 d S P3 P 0.22225(2) 0.30960(2) 0.22155(2) 0.02000(10) Uiso 1 1 d . O19 O 0.60582(5) 0.22517(5) 0.21415(5) 0.0200(2) Uiso 1 1 d . O21 O 0.63575(6) 0.07470(6) 0.20845(5) 0.0200(2) Uiso 1 1 d . O22 O 0.25920(6) 0.08675(5) 0.14255(4) 0.0200(2) Uiso 1 1 d . O23 O 0.14867(5) 0.03987(5) 0.24615(5) 0.0200(2) Uiso 1 1 d . O24 O 0.21070(6) -0.07095(5) 0.18450(5) 0.0200(2) Uiso 1 1 d . O25 O 0.23750(6) 0.22365(6) 0.20230(5) 0.0200(2) Uiso 1 1 d . O26 O 0.29385(5) 0.32420(5) 0.24900(5) 0.0200(2) Uiso 1 1 d . O27 O 0.15137(5) 0.30417(5) 0.25170(5) 0.0200(2) Uiso 1 1 d . O28 O 0.21267(6) 0.36298(5) 0.18020(5) 0.0200(2) Uiso 1 1 d . N17 N 0.53875(7) 0.31540(7) 0.29335(6) 0.0200(3) Uiso 1 1 d . N19 N 0.46782(7) 0.13418(7) 0.20245(6) 0.0200(3) Uiso 1 1 d . N20 N 0.58525(7) -0.03820(7) 0.18255(6) 0.0200(3) Uiso 1 1 d . N21 N 0.54817(7) -0.15517(7) 0.14905(6) 0.0200(3) Uiso 1 1 d . N22 N 0.45540(7) -0.06000(7) 0.16135(6) 0.0200(3) Uiso 1 1 d . N23 N 0.37800(7) 0.05455(7) 0.17325(6) 0.0200(3) Uiso 1 1 d . C27 C 0.51533(8) 0.38872(8) 0.27005(6) 0.0200(4) Uiso 1 1 d . C29 C 0.49773(9) 0.06528(9) 0.19280(6) 0.0200(4) Uiso 1 1 d . C30 C 0.57735(9) 0.03755(9) 0.19640(7) 0.0200(4) Uiso 1 1 d . C31 C 0.52692(8) -0.08353(8) 0.16340(7) 0.0200(4) Uiso 1 1 d . C32 C 0.44627(9) 0.01367(8) 0.17370(7) 0.0200(4) Uiso 1 1 d . C33 C 0.39300(8) 0.12660(9) 0.19060(7) 0.0200(4) Uiso 1 1 d . C34 C 0.30295(9) 0.02320(8) 0.15980(7) 0.0200(3) Uiso 1 1 d . C35 C 0.19307(9) 0.09912(8) 0.17240(7) 0.0200(4) Uiso 1 1 d . C36 C 0.21265(8) 0.06035(8) 0.21845(7) 0.0200(3) Uiso 1 1 d . C37 C 0.26145(8) -0.01035(8) 0.20205(7) 0.0200(4) Uiso 1 1 d . C38 C 0.17805(8) 0.18565(9) 0.17510(7) 0.0200(3) Uiso 1 1 d . N13 N 0.14797(7) 0.29833(7) 0.34425(6) 0.0200(3) Uiso 1 1 d . N14 N 0.28272(7) 0.15217(7) 0.37800(6) 0.0200(3) Uiso 1 1 d . C23 C 0.21842(9) 0.26832(8) 0.36460(7) 0.0200(4) Uiso 1 1 d . C24 C 0.22548(8) 0.18463(8) 0.34900(7) 0.0200(3) Uiso 1 1 d . O48 O 0.02962(11) 0.18173(11) 0.36345(9) 0.0200(5) Uiso 0.50 1 d P O49 O 0.05827(11) 0.23722(11) 0.40845(10) 0.0200(5) Uiso 0.50 1 d P O37 O 0.38802(6) 0.55832(6) 0.03400(5) 0.0200(2) Uiso 1 1 d . O39 O 0.30772(5) 0.48513(5) 0.16625(4) 0.0200(2) Uiso 1 1 d . O41 O 0.08448(6) 0.19537(5) 0.06830(5) 0.0200(2) Uiso 1 1 d . O42 O 0.05268(5) 0.01863(5) 0.37895(4) 0.0200(2) Uiso 1 1 d . O45 O 0.0000 0.25415(8) 0.2500 0.0200(3) Uiso 1 2 d S O46 O 0.57687(5) 0.42682(5) 0.12830(5) 0.0200(2) Uiso 1 1 d . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Ni1 N1 2.1066(14) 3 Ni1 N1 2.1066(14) . Ni1 O1 2.1146(11) 3 Ni1 O1 2.1146(11) . Ni1 N3 2.1487(14) . Ni1 N3 2.1487(14) 3 P1 O10 1.4865(12) . P1 O8 1.5119(13) . P1 O9 1.5165(10) . P1 O7 1.6284(12) . O3 C4 1.2349(19) . O4 C8 1.424(2) . O4 C9 1.4897(19) . O5 C10 1.4396(19) . O6 C11 1.442(2) . O7 C12 1.432(2) . N1 C1 1.433(2) . N3 C7 1.3189(19) . N3 C3 1.388(2) . N4 C5 1.366(2) . N4 C4 1.4210(19) . N5 C5 1.3555(19) . N6 C5 1.304(2) . N6 C6 1.355(2) . N7 C6 1.373(2) . N7 C7 1.388(2) . N7 C8 1.4213(19) . C1 C1 1.396(3) 3 C3 C6 1.383(2) . C3 C4 1.392(2) . C8 C11 1.543(3) . C9 C12 1.493(2) . C9 C10 1.515(3) . C10 C11 1.531(2) . Ni2 N17 2.1007(14) . Ni2 N17 2.1007(14) 4_655 Ni2 O19 2.1100(11) 4_655 Ni2 O19 2.1100(11) . Ni2 N19 2.1541(14) . Ni2 N19 2.1541(14) 4_655 P3 O26 1.4952(11) . P3 O28 1.5051(12) . P3 O27 1.5083(12) . P3 O25 1.6096(11) . O21 C30 1.2538(19) . O22 C34 1.4275(19) . O22 C35 1.449(2) . O23 C36 1.412(2) . O24 C37 1.462(2) . O25 C38 1.452(2) . N17 C27 1.4905(19) . N19 C29 1.332(2) . N19 C33 1.356(2) . N20 C30 1.3779(19) . N20 C31 1.397(2) . N21 C31 1.359(2) . N22 C31 1.315(2) . N22 C32 1.334(2) . N23 C33 1.368(2) . N23 C32 1.387(2) . N23 C34 1.469(2) . C27 C27 1.259(3) 4_655 C29 C32 1.379(3) . C29 C30 1.475(2) . C34 C37 1.518(3) . C35 C36 1.510(3) . C35 C38 1.5249(19) . C36 C37 1.564(2) . N13 C23 1.456(2) . N14 C24 1.412(2) . C23 C24 1.522(2) . O48 O49 1.677(3) . loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N1 Ni1 N1 81.82(8) 3 . N1 Ni1 O1 91.90(5) 3 3 N1 Ni1 O1 91.40(5) . 3 N1 Ni1 O1 91.40(5) 3 . N1 Ni1 O1 91.90(5) . . O1 Ni1 O1 175.63(5) 3 . N1 Ni1 N3 174.81(6) 3 . N1 Ni1 N3 94.97(5) . . O1 Ni1 N3 84.07(5) 3 . O1 Ni1 N3 92.79(5) . . N1 Ni1 N3 94.97(5) 3 3 N1 Ni1 N3 174.81(6) . 3 O1 Ni1 N3 92.79(5) 3 3 O1 Ni1 N3 84.07(5) . 3 N3 Ni1 N3 88.51(8) . 3 O10 P1 O8 113.59(6) . . O10 P1 O9 113.19(7) . . O8 P1 O9 112.01(6) . . O10 P1 O7 108.26(6) . . O8 P1 O7 105.36(7) . . O9 P1 O7 103.52(6) . . C8 O4 C9 108.93(13) . . C12 O7 P1 120.80(9) . . C1 N1 Ni1 107.33(10) . . C7 N3 C3 105.43(13) . . C7 N3 Ni1 121.90(11) . . C3 N3 Ni1 128.92(11) . . C5 N4 C4 124.68(14) . . C5 N6 C6 110.83(14) . . C6 N7 C7 105.84(12) . . C6 N7 C8 124.44(12) . . C7 N7 C8 129.56(12) . . C1 C1 N1 113.75(11) 3 . C6 C3 N3 109.52(13) . . C6 C3 C4 119.27(14) . . N3 C3 C4 131.16(14) . . O3 C4 C3 132.56(13) . . O3 C4 N4 116.95(14) . . C3 C4 N4 110.45(13) . . N6 C5 N5 119.08(15) . . N6 C5 N4 124.82(13) . . N5 C5 N4 116.10(15) . . N6 C6 N7 124.13(14) . . N6 C6 C3 128.92(16) . . N7 C6 C3 106.81(13) . . N3 C7 N7 112.17(13) . . N7 C8 O4 108.73(11) . . N7 C8 C11 113.06(16) . . O4 C8 C11 108.19(12) . . O4 C9 C12 107.12(12) . . O4 C9 C10 104.45(12) . . C12 C9 C10 116.00(16) . . O5 C10 C9 113.01(12) . . O5 C10 C11 108.82(11) . . C9 C10 C11 103.86(15) . . O6 C11 C10 113.06(12) . . O6 C11 C8 107.69(15) . . C10 C11 C8 100.58(13) . . O7 C12 C9 112.83(13) . . N17 Ni2 N17 83.99(8) . 4_655 N17 Ni2 O19 90.00(5) . 4_655 N17 Ni2 O19 90.12(5) 4_655 4_655 N17 Ni2 O19 90.12(5) . . N17 Ni2 O19 90.00(5) 4_655 . O19 Ni2 O19 179.83(6) 4_655 . N17 Ni2 N19 175.75(5) . . N17 Ni2 N19 95.36(5) 4_655 . O19 Ni2 N19 94.21(5) 4_655 . O19 Ni2 N19 85.67(5) . . N17 Ni2 N19 95.36(5) . 4_655 N17 Ni2 N19 175.75(5) 4_655 4_655 O19 Ni2 N19 85.67(5) 4_655 4_655 O19 Ni2 N19 94.21(5) . 4_655 N19 Ni2 N19 85.59(8) . 4_655 O26 P3 O28 113.34(6) . . O26 P3 O27 113.60(8) . . O28 P3 O27 113.00(6) . . O26 P3 O25 101.29(6) . . O28 P3 O25 108.80(7) . . O27 P3 O25 105.73(6) . . C34 O22 C35 109.86(12) . . C38 O25 P3 118.86(9) . . C27 N17 Ni2 106.56(10) . . C29 N19 C33 103.87(13) . . C29 N19 Ni2 133.22(12) . . C33 N19 Ni2 118.58(11) . . C30 N20 C31 125.07(13) . . C31 N22 C32 113.50(13) . . C33 N23 C32 107.38(13) . . C33 N23 C34 127.03(12) . . C32 N23 C34 125.45(12) . . C27 C27 N17 121.25(9) 4_655 . N19 C29 C32 114.03(14) . . N19 C29 C30 130.36(14) . . C32 C29 C30 115.47(14) . . O21 C30 N20 119.09(14) . . O21 C30 C29 128.19(13) . . N20 C30 C29 112.66(14) . . N22 C31 N21 121.97(14) . . N22 C31 N20 122.36(14) . . N21 C31 N20 115.60(13) . . N22 C32 C29 130.29(15) . . N22 C32 N23 126.12(15) . . C29 C32 N23 103.42(13) . . N19 C33 N23 111.26(13) . . O22 C34 N23 106.33(11) . . O22 C34 C37 108.17(12) . . N23 C34 C37 111.21(15) . . O22 C35 C36 105.13(12) . . O22 C35 C38 108.19(13) . . C36 C35 C38 115.67(16) . . O23 C36 C35 114.57(13) . . O23 C36 C37 113.59(12) . . C35 C36 C37 102.36(15) . . O24 C37 C34 107.15(15) . . O24 C37 C36 109.55(11) . . C34 C37 C36 101.27(13) . . O25 C38 C35 110.50(13) . . N13 C23 C24 107.07(14) . . N14 C24 C23 105.50(15) . . _journal_paper_doi 10.1107/S0108768102022668