#------------------------------------------------------------------------------ #$Date: 2016-02-20 00:53:41 +0000 (Sat, 20 Feb 2016) $ #$Revision: 176768 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/38/2103807.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2103807 loop_ _publ_author_name 'Bowes, Katharine F.' 'Ferguson, George' 'Lough, Alan J.' 'Zakaria, Choudhury M.' 'Glidewell, Christopher' _publ_section_title ; Phosphonoacetic acid as a building block in supramolecular chemistry: salts with organic polyamines ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 87 _journal_page_last 99 _journal_paper_doi 10.1107/S010876810201858X _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C16 H38 N4, 2(C2 H4 O5 P)' _chemical_formula_sum 'C20 H46 N4 O10 P2' _chemical_formula_weight 564.55 _chemical_name_systematic ; meso-5,5,7,12,12,14-Hexa-C-methyl-1,4,8,11- tetraazacyclotetradecane--phosphonoacetic acid (1/2) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 62.5110(9) _cell_angle_beta 85.6800(8) _cell_angle_gamma 67.1910(9) _cell_formula_units_Z 1 _cell_length_a 8.7219(2) _cell_length_b 9.89470(10) _cell_length_c 9.9343(2) _cell_measurement_reflns_used 2923 _cell_measurement_temperature 150.0(10) _cell_measurement_theta_max 27.44 _cell_measurement_theta_min 2.55 _cell_volume 695.42(2) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'Kappa-CCD server software (Nonius, 1997)' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'PLATON (Spek, 2002)' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997a) and PRPKAPPA (Ferguson, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997b)' _diffrn_ambient_temperature 150.0(10) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type Kappa-CCD _diffrn_measurement_method '\f scans, and \w scans with \k offsets' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.026 _diffrn_reflns_av_sigmaI/netI 0.0366 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 9161 _diffrn_reflns_theta_full 27.44 _diffrn_reflns_theta_max 27.44 _diffrn_reflns_theta_min 2.55 _diffrn_standards_decay_% 0 _exptl_absorpt_coefficient_mu 0.213 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.348 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 304 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.273 _refine_diff_density_min -0.413 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.050 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 174 _refine_ls_number_reflns 3148 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.058 _refine_ls_R_factor_all 0.0426 _refine_ls_R_factor_gt 0.0360 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0375P)^2^+0.3032P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0939 _refine_ls_wR_factor_ref 0.0979 _reflns_number_gt 2745 _reflns_number_total 3148 _reflns_threshold_expression >2\s(I) _cod_data_source_file bm0057.cif _cod_data_source_block IV _cod_database_code 2103807 _cod_database_fobs_code 2103807 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 0.38142(14) 0.75819(15) 0.36971(14) 0.0249(3) Uani d . 1 . . N C2 0.50414(19) 0.7679(2) 0.25656(18) 0.0320(3) Uani d . 1 . . C C3 0.53834(19) 0.6374(2) 0.20624(17) 0.0333(3) Uani d . 1 . . C N4 0.63215(15) 0.47060(17) 0.33057(14) 0.0297(3) Uani d . 1 . . N C5 0.6823(2) 0.3331(2) 0.2899(2) 0.0387(4) Uani d D 1 . . C C51 0.8089(2) 0.3448(3) 0.1729(3) 0.0543(5) Uani d . 1 . . C C52 0.5273(3) 0.3286(4) 0.2214(3) 0.0440(7) Uani d PD 0.711(4) . . C C6 0.7627(2) 0.1684(2) 0.4368(2) 0.0413(4) Uani d . 1 . . C C7 0.6511(2) 0.1265(2) 0.5616(2) 0.0384(4) Uani d D 1 . . C C71 0.7326(4) -0.0533(2) 0.6870(3) 0.0730(8) Uani d . 1 . . C C72 0.5066(6) 0.1389(7) 0.4802(6) 0.0319(14) Uiso d PD 0.289(4) . . C P1 -0.07373(4) 0.85424(5) 0.20055(4) 0.02476(12) Uani d . 1 . . P O1 0.04282(14) 0.40071(13) 0.39647(12) 0.0301(2) Uani d . 1 . . O O2 0.22829(14) 0.50639(14) 0.39544(13) 0.0354(3) Uani d . 1 . . O O3 -0.20618(13) 0.98336(14) 0.05432(12) 0.0359(3) Uani d . 1 . . O O4 0.07233(13) 0.90260(13) 0.19184(12) 0.0303(2) Uani d . 1 . . O O5 -0.16478(13) 0.83423(13) 0.33803(12) 0.0303(2) Uani d . 1 . . O C11 0.10463(18) 0.51497(18) 0.33723(16) 0.0253(3) Uani d . 1 . . C C12 0.0033(2) 0.6616(2) 0.18921(17) 0.0304(3) Uani d . 1 . . C H1A 0.4193 0.6508 0.4480 0.030 Uiso calc R 1 . . H H1B 0.2811 0.7807 0.3228 0.030 Uiso calc R 1 . . H H2A 0.6104 0.7521 0.3029 0.038 Uiso calc R 1 . . H H2B 0.4595 0.8795 0.1663 0.038 Uiso calc R 1 . . H H3A 0.4307 0.6437 0.1726 0.040 Uiso calc R 1 . . H H3B 0.6033 0.6595 0.1181 0.040 Uiso calc R 1 . . H H4 0.7275 0.4692 0.3660 0.036 Uiso calc R 1 . . H H51A 0.7578 0.4489 0.0779 0.081 Uiso calc R 1 . . H H51B 0.8407 0.2506 0.1518 0.081 Uiso calc R 1 . . H H51C 0.9089 0.3423 0.2145 0.081 Uiso calc R 1 . . H H52A 0.4383 0.3353 0.2874 0.066 Uiso calc PR 0.711(4) . . H H52B 0.5625 0.2246 0.2158 0.066 Uiso calc PR 0.711(4) . . H H52C 0.4853 0.4230 0.1186 0.066 Uiso calc PR 0.711(4) . . H H6A 0.8059 0.0775 0.4088 0.050 Uiso calc R 1 . . H H6B 0.8603 0.1697 0.4802 0.050 Uiso calc R 1 . . H H71A 0.6562 -0.0762 0.7639 0.110 Uiso calc R 1 . . H H71B 0.8374 -0.0712 0.7354 0.110 Uiso calc R 1 . . H H71C 0.7566 -0.1281 0.6421 0.110 Uiso calc R 1 . . H H72A 0.4364 0.2561 0.4133 0.048 Uiso calc PR 0.289(4) . . H H72B 0.4402 0.0875 0.5550 0.048 Uiso calc PR 0.289(4) . . H H72C 0.5476 0.0812 0.4186 0.048 Uiso calc PR 0.289(4) . . H H1 0.0942 0.3285 0.4841 0.045 Uiso calc R 1 . . H H3 -0.1563 1.0155 -0.0225 0.054 Uiso calc R 1 . . H H12A -0.0930 0.6435 0.1651 0.036 Uiso calc R 1 . . H H12B 0.0739 0.6702 0.1053 0.036 Uiso calc R 1 . . H H5 0.5862 0.3303 0.2474 0.050 Uiso d P 0.29 A -1 H H7 0.5552 0.1346 0.5080 0.050 Uiso d P 0.71 A -1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0199(6) 0.0202(6) 0.0308(6) -0.0062(5) -0.0019(5) -0.0098(5) C2 0.0252(7) 0.0323(8) 0.0290(7) -0.0137(6) 0.0001(6) -0.0048(6) C3 0.0249(7) 0.0426(9) 0.0238(7) -0.0098(7) 0.0020(6) -0.0117(7) N4 0.0217(6) 0.0363(7) 0.0264(6) -0.0035(5) 0.0004(5) -0.0172(6) C5 0.0271(8) 0.0536(10) 0.0396(9) -0.0056(7) 0.0034(7) -0.0336(9) C51 0.0387(10) 0.0883(16) 0.0603(12) -0.0219(10) 0.0188(9) -0.0584(13) C52 0.0332(13) 0.0618(17) 0.0536(16) -0.0168(12) 0.0013(11) -0.0411(14) C6 0.0306(8) 0.0410(9) 0.0560(11) 0.0013(7) -0.0029(8) -0.0372(9) C7 0.0388(9) 0.0266(8) 0.0524(10) -0.0096(7) -0.0084(8) -0.0212(8) C71 0.102(2) 0.0228(9) 0.0812(17) -0.0100(11) -0.0250(15) -0.0212(10) P1 0.0222(2) 0.02398(19) 0.02130(19) -0.01077(15) 0.00025(14) -0.00380(15) O1 0.0358(6) 0.0300(6) 0.0262(5) -0.0177(5) 0.0040(4) -0.0109(4) O2 0.0271(6) 0.0327(6) 0.0413(6) -0.0126(5) 0.0013(5) -0.0127(5) O3 0.0252(6) 0.0385(6) 0.0270(6) -0.0148(5) -0.0037(4) 0.0004(5) O4 0.0272(5) 0.0276(5) 0.0270(5) -0.0146(4) -0.0033(4) -0.0020(4) O5 0.0296(6) 0.0274(5) 0.0275(5) -0.0104(5) 0.0057(4) -0.0092(4) C11 0.0252(7) 0.0268(7) 0.0269(7) -0.0100(6) 0.0095(6) -0.0161(6) C12 0.0367(8) 0.0341(8) 0.0216(7) -0.0166(7) 0.0052(6) -0.0123(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C2 N1 C7 . 2_666 115.82(12) no C2 N1 H1A . . 108.3 no C7 N1 H1A 2_666 . 108.3 no C2 N1 H1B . . 108.3 no C7 N1 H1B 2_666 . 108.3 no H1A N1 H1B . . 107.4 no N1 C2 C3 . . 111.22(12) no N1 C2 H2A . . 109.4 no C3 C2 H2A . . 109.4 no N1 C2 H2B . . 109.4 no C3 C2 H2B . . 109.4 no H2A C2 H2B . . 108.0 no N4 C3 C2 . . 111.18(12) no N4 C3 H3A . . 109.4 no C2 C3 H3A . . 109.4 no N4 C3 H3B . . 109.4 no C2 C3 H3B . . 109.4 no H3A C3 H3B . . 108.0 no C3 N4 C5 . . 115.51(12) no C3 N4 H4 . . 108.4 no C5 N4 H4 . . 108.4 no N4 C5 C6 . . 107.89(12) no N4 C5 C51 . . 112.25(16) no C6 C5 C51 . . 108.92(15) no N4 C5 C52 . . 112.53(15) no C6 C5 C52 . . 107.47(18) no C51 C5 C52 . . 107.63(16) no N4 C5 H5 . . 112.5 no C6 C5 H5 . . 107.5 no C51 C5 H5 . . 107.6 no C5 C51 H51A . . 109.5 no C5 C51 H51B . . 109.5 no H51A C51 H51B . . 109.5 no C5 C51 H51C . . 109.5 no H51A C51 H51C . . 109.5 no H51B C51 H51C . . 109.5 no C5 C52 H52A . . 109.5 no C5 C52 H52B . . 109.5 no H52A C52 H52B . . 109.5 no C5 C52 H52C . . 109.5 no H52A C52 H52C . . 109.5 no H52B C52 H52C . . 109.5 no H52A C52 H5 . . 109.5 no H52B C52 H5 . . 109.5 no H52C C52 H5 . . 109.5 no C7 C6 C5 . . 116.82(13) no C7 C6 H6A . . 108.1 no C5 C6 H6A . . 108.1 no C7 C6 H6B . . 108.1 no C5 C6 H6B . . 108.1 no H6A C6 H6B . . 107.3 no C72 C7 N1 . 2_666 118.2(2) no C72 C7 C6 . . 102.7(2) no N1 C7 C6 2_666 . 108.02(13) no C72 C7 C71 . . 106.5(3) no N1 C7 C71 2_666 . 109.42(15) no C6 C7 C71 . . 111.90(17) no N1 C7 H7 2_666 . 118.1 no C6 C7 H7 . . 102.9 no C71 C7 H7 . . 106.5 no C7 C71 H71A . . 109.5 no C7 C71 H71B . . 109.5 no H71A C71 H71B . . 109.5 no C7 C71 H71C . . 109.5 no H71A C71 H71C . . 109.5 no H71B C71 H71C . . 109.5 no C7 C72 H72A . . 109.5 no C7 C72 H72B . . 109.5 no H72A C72 H72B . . 109.5 no C7 C72 H72C . . 109.5 no H72A C72 H72C . . 109.5 no H72B C72 H72C . . 109.5 no H72A C72 H7 . . 109.6 no H72B C72 H7 . . 109.1 no H72C C72 H7 . . 109.7 no O5 P1 O4 . . 116.93(6) no O5 P1 O3 . . 107.75(6) no O4 P1 O3 . . 110.26(6) no O5 P1 C12 . . 109.11(6) no O4 P1 C12 . . 107.60(7) no O3 P1 C12 . . 104.47(7) no C11 O1 H1 . . 109.5 no P1 O3 H3 . . 109.5 no O2 C11 O1 . . 124.27(14) no O2 C11 C12 . . 123.12(13) no O1 C11 C12 . . 112.60(13) no C11 C12 P1 . . 111.65(10) no C11 C12 H12A . . 109.3 no P1 C12 H12A . . 109.3 no C11 C12 H12B . . 109.3 no P1 C12 H12B . . 109.3 no H12A C12 H12B . . 108.0 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.4890(19) no N1 C7 2_666 1.5119(19) no N1 H1A . 0.92 no N1 H1B . 0.92 no C2 C3 . 1.511(2) no C2 H2A . 0.99 no C2 H2B . 0.99 no C3 N4 . 1.464(2) no C3 H3A . 0.99 no C3 H3B . 0.99 no N4 C5 . 1.492(2) no N4 H4 . 0.92 no C5 C6 . 1.533(3) no C5 C51 . 1.538(2) no C5 C52 . 1.583(3) no C5 H5 . 0.98 no C51 H51A . 0.98 no C51 H51B . 0.98 no C51 H51C . 0.98 no C52 H52A . 0.98 no C52 H52B . 0.98 no C52 H52C . 0.98 no C6 C7 . 1.521(3) no C6 H6A . 0.99 no C6 H6B . 0.99 no C7 C72 . 1.484(5) no C7 N1 2_666 1.5119(19) no C7 C71 . 1.526(3) no C7 H7 . 0.98 no C71 H71A . 0.98 no C71 H71B . 0.98 no C71 H71C . 0.98 no C72 H72A . 0.98 no C72 H72B . 0.98 no C72 H72C . 0.98 no P1 O5 . 1.4980(11) no P1 O4 . 1.5090(10) no P1 O3 . 1.5724(11) no P1 C12 . 1.8146(16) no O1 C11 . 1.3137(17) no O1 H1 . 0.84 no O2 C11 . 1.2176(18) no O3 H3 . 0.84 no C11 C12 . 1.510(2) no C12 H12A . 0.99 no C12 H12B . 0.99 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1A N4 2_666 0.92 2.08 2.817(2) 137 y N1 H1B O4 . 0.92 1.92 2.799(2) 160 y N4 H4 O2 2_666 0.92 2.56 3.198(2) 127 y N4 H4 O1 1_655 0.92 2.57 3.428(2) 155 y O1 H1 O5 2_566 0.84 1.69 2.517(2) 167 y O3 H3 O4 2_575 0.84 1.74 2.581(2) 174 y C2 H2A O5 1_655 0.99 2.50 3.426(2) 156 y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag C7 N1 C2 C3 2_666 . . 174.97(12) no N1 C2 C3 N4 . . . -69.30(16) no C2 C3 N4 C5 . . . -176.17(12) no C3 N4 C5 C6 . . . -174.41(13) no C3 N4 C5 C51 . . . 65.58(18) no C3 N4 C5 C52 . . . -56.0(2) no N4 C5 C6 C7 . . . 63.29(18) no C51 C5 C6 C7 . . . -174.62(14) no C52 C5 C6 C7 . . . -58.29(19) no C5 C6 C7 C72 . . . 54.5(3) no C5 C6 C7 N1 . . 2_666 -71.09(17) no C6 C7 N1 C2 . 2_666 2_666 173.6(2) no C5 C6 C7 C71 . . . 168.41(15) no O2 C11 C12 P1 . . . -57.35(17) no O1 C11 C12 P1 . . . 121.49(11) no O5 P1 C12 C11 . . . -52.86(12) no O4 P1 C12 C11 . . . 74.93(11) no O3 P1 C12 C11 . . . -167.87(10) no