#------------------------------------------------------------------------------ #$Date: 2012-01-04 09:47:25 +0000 (Wed, 04 Jan 2012) $ #$Revision: 31984 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/38/2103809.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2103809 loop_ _publ_author_name 'Bowes, Katharine F.' 'Ferguson, George' 'Lough, Alan J.' 'Zakaria, Choudhury M.' 'Glidewell, Christopher' _publ_section_title ; Phosphonoacetic acid as a building block in supramolecular chemistry: salts with organic polyamines ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 87 _journal_page_last 99 _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C12 H14 N2, 2(C2 H4 O5 P)' _chemical_formula_sum 'C16 H22 N2 O10 P2' _chemical_formula_weight 464.30 _chemical_name_systematic ; 1,2-Bis(4'-pyridyl)ethane--phosphonoacetic acid (1/2) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.761(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.8501(3) _cell_length_b 15.1862(6) _cell_length_c 7.3741(3) _cell_measurement_reflns_used 5037 _cell_measurement_temperature 150.0(10) _cell_measurement_theta_max 27.51 _cell_measurement_theta_min 2.66 _cell_volume 990.99(7) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'Kappa-CCD server software (Nonius, 1997)' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'PLATON (Spek, 2002)' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997a) and PRPKAPPA (Ferguson, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997b)' _diffrn_ambient_temperature 150.0(10) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type Kappa-CCD _diffrn_measurement_method '\f scans, and \w scans with \k offsets' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.035 _diffrn_reflns_av_sigmaI/netI 0.0531 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -19 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 6047 _diffrn_reflns_theta_full 27.51 _diffrn_reflns_theta_max 27.51 _diffrn_reflns_theta_min 2.66 _diffrn_standards_decay_% 0 _exptl_absorpt_coefficient_mu 0.279 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.556 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 484 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.308 _refine_diff_density_min -0.438 _refine_ls_extinction_coef 0.011(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.064 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 139 _refine_ls_number_reflns 2263 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.064 _refine_ls_R_factor_all 0.0478 _refine_ls_R_factor_gt 0.0382 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0431P)^2^+0.3391P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0969 _refine_ls_wR_factor_ref 0.1025 _reflns_number_gt 1883 _reflns_number_total 2263 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file bm0057.cif _[local]_cod_data_source_block VI _[local]_cod_cif_authors_sg_H-M P21/c loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N11 0.34697(17) 0.22012(10) 0.4545(2) 0.0243(3) Uani d . 1 N C12 0.3901(2) 0.13831(12) 0.4128(3) 0.0250(4) Uani d . 1 C C13 0.2983(2) 0.06793(12) 0.4530(2) 0.0226(4) Uani d . 1 C C14 0.16064(19) 0.08219(11) 0.5379(2) 0.0200(4) Uani d . 1 C C15 0.1202(2) 0.16862(12) 0.5789(3) 0.0248(4) Uani d . 1 C C16 0.2152(2) 0.23682(12) 0.5355(3) 0.0263(4) Uani d . 1 C C17 0.05716(19) 0.00666(11) 0.5789(2) 0.0201(4) Uani d . 1 C P1 0.68900(5) 0.32839(3) 0.36203(6) 0.01589(16) Uani d . 1 P O1 0.61750(14) 0.49497(8) 0.64863(17) 0.0228(3) Uani d . 1 O O2 0.79401(15) 0.54881(8) 0.46390(19) 0.0293(3) Uani d . 1 O O3 0.75737(14) 0.35912(8) 0.17802(16) 0.0216(3) Uani d . 1 O O4 0.52239(13) 0.35167(8) 0.36887(18) 0.0222(3) Uani d . 1 O O5 0.72120(14) 0.23257(8) 0.39571(16) 0.0213(3) Uani d . 1 O C1 0.73635(19) 0.48752(11) 0.5417(2) 0.0190(4) Uani d . 1 C C2 0.79104(19) 0.39360(11) 0.5294(2) 0.0195(4) Uani d . 1 C H11 0.4069 0.2644 0.4280 0.029 Uiso calc R 1 H H12 0.4841 0.1287 0.3555 0.030 Uiso calc R 1 H H13 0.3287 0.0098 0.4229 0.027 Uiso calc R 1 H H15 0.0270 0.1803 0.6368 0.030 Uiso calc R 1 H H16 0.1875 0.2957 0.5628 0.032 Uiso calc R 1 H H17A 0.0022 0.0188 0.6923 0.024 Uiso calc R 1 H H17B 0.1172 -0.0477 0.5968 0.024 Uiso calc R 1 H H1 0.5843 0.5467 0.6436 0.034 Uiso calc R 1 H H3 0.7424 0.3202 0.0989 0.032 Uiso calc R 1 H H2A 0.7811 0.3653 0.6496 0.023 Uiso calc R 1 H H2B 0.8996 0.3939 0.4988 0.023 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N11 0.0241(8) 0.0232(8) 0.0256(8) -0.0095(6) -0.0007(6) 0.0029(6) C12 0.0214(8) 0.0280(10) 0.0257(10) -0.0044(7) 0.0014(7) -0.0008(8) C13 0.0229(9) 0.0218(9) 0.0230(9) -0.0015(7) 0.0011(7) -0.0027(7) C14 0.0200(8) 0.0228(9) 0.0172(8) -0.0046(7) -0.0039(6) 0.0012(7) C15 0.0207(9) 0.0236(9) 0.0302(10) -0.0026(7) 0.0025(7) -0.0006(7) C16 0.0254(9) 0.0220(9) 0.0313(11) -0.0029(7) -0.0009(8) 0.0004(8) C17 0.0207(8) 0.0200(9) 0.0197(9) -0.0035(7) -0.0003(7) 0.0015(7) P1 0.0174(2) 0.0147(2) 0.0156(2) -0.00116(15) 0.00267(16) -0.00017(15) O1 0.0257(7) 0.0204(6) 0.0226(7) 0.0024(5) 0.0033(5) -0.0009(5) O2 0.0343(7) 0.0211(7) 0.0325(8) -0.0038(6) 0.0052(6) 0.0013(6) O3 0.0286(7) 0.0202(6) 0.0162(6) -0.0067(5) 0.0050(5) -0.0010(5) O4 0.0181(6) 0.0186(6) 0.0299(7) -0.0010(5) 0.0027(5) -0.0020(5) O5 0.0299(7) 0.0163(6) 0.0180(6) 0.0002(5) 0.0021(5) -0.0006(5) C1 0.0202(8) 0.0205(8) 0.0162(8) -0.0015(7) -0.0039(6) -0.0011(7) C2 0.0214(8) 0.0190(8) 0.0179(8) 0.0005(6) -0.0003(6) -0.0004(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N11 C12 . 1.337(2) no N11 C16 . 1.342(2) no N11 H11 . 0.88 no C12 C13 . 1.377(2) no C12 H12 . 0.95 no C13 C14 . 1.394(2) no C13 H13 . 0.95 no C14 C15 . 1.395(2) no C14 C17 . 1.501(2) no C15 C16 . 1.374(2) no C15 H15 . 0.95 no C16 H16 . 0.95 no C17 C17 3_556 1.545(3) no C17 H17A . 0.99 no C17 H17B . 0.99 no P1 O5 . 1.5029(12) no P1 O4 . 1.5178(12) no P1 O3 . 1.5643(12) no P1 C2 . 1.8136(18) no O1 C1 . 1.328(2) no O1 H1 . 0.84 no O2 C1 . 1.210(2) no O3 H3 . 0.84 no C1 C2 . 1.509(2) no C2 H2A . 0.99 no C2 H2B . 0.99 no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C12 N11 C16 . . 122.05(15) no C12 N11 H11 . . 119.0 no C16 N11 H11 . . 119.0 no N11 C12 C13 . . 120.07(16) no N11 C12 H12 . . 120.0 no C13 C12 H12 . . 120.0 no C12 C13 C14 . . 119.83(17) no C12 C13 H13 . . 120.1 no C14 C13 H13 . . 120.1 no C13 C14 C15 . . 118.16(16) no C13 C14 C17 . . 120.73(16) no C15 C14 C17 . . 121.09(16) no C16 C15 C14 . . 119.94(17) no C16 C15 H15 . . 120.0 no C14 C15 H15 . . 120.0 no N11 C16 C15 . . 119.95(17) no N11 C16 H16 . . 120.0 no C15 C16 H16 . . 120.0 no C14 C17 C17 . 3_556 110.08(18) no C14 C17 H17A . . 109.6 no C17 C17 H17A 3_556 . 109.6 no C14 C17 H17B . . 109.6 no C17 C17 H17B 3_556 . 109.6 no H17A C17 H17B . . 108.2 no O5 P1 O4 . . 113.71(7) no O5 P1 O3 . . 110.95(7) no O4 P1 O3 . . 110.27(7) no O5 P1 C2 . . 108.95(8) no O4 P1 C2 . . 108.99(7) no O3 P1 C2 . . 103.44(7) no C1 O1 H1 . . 109.5 no P1 O3 H3 . . 109.5 no O2 C1 O1 . . 123.95(16) no O2 C1 C2 . . 124.11(16) no O1 C1 C2 . . 111.94(14) no C1 C2 P1 . . 113.57(12) no C1 C2 H2A . . 108.9 no P1 C2 H2A . . 108.9 no C1 C2 H2B . . 108.9 no P1 C2 H2B . . 108.9 no H2A C2 H2B . . 107.7 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag C16 N11 C12 C13 . 0.0(3) no N11 C12 C13 C14 . -0.3(3) no C12 C13 C14 C15 . 0.3(3) no C12 C13 C14 C17 . 178.54(16) no C13 C14 C15 C16 . 0.0(3) no C17 C14 C15 C16 . -178.25(17) no C12 N11 C16 C15 . 0.3(3) no C14 C15 C16 N11 . -0.3(3) no C13 C14 C17 C17 3_556 -92.4(2) no C15 C14 C17 C17 3_556 85.9(2) no O2 C1 C2 P1 . -96.25(18) no O1 C1 C2 P1 . 83.93(15) no O5 P1 C2 C1 . -164.52(12) no O4 P1 C2 C1 . -39.92(14) no O3 P1 C2 C1 . 77.40(13) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N11 H11 O4 . 0.88 1.73 2.613(2) 178 y O1 H1 O4 3_666 0.84 1.81 2.640(2) 169 y O3 H3 O5 4_565 0.84 1.71 2.521(2) 163 y C13 H13 O3 2_645 0.95 2.52 3.349(2) 146 y C15 H15 O3 4_466 0.95 2.48 3.329(2) 148 y C16 H16 O2 3_666 0.95 2.38 3.256(2) 154 y _cod_database_code 2103809