#------------------------------------------------------------------------------ #$Date: 2008-06-20 14:44:24 +0100 (Fri, 20 Jun 2008) $ #$Revision: 397 $ #$URL: svn://www.crystallography.net/cod/cif/2/2103863.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2103863 loop_ _publ_author_name 'Bowes, Katharine F.' 'Ferguson, George' 'Lough, Alan J.' 'Glidewell, Christopher' _publ_section_title ; Phosphonopropionic acid as a building block in supramolecular chemistry: salts with organic diamines ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 248 _journal_page_last 262 _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C12 H14 N2 2+, 2(C3 H6 O5 P 1-)' _chemical_formula_sum 'C18 H26 N2 O10 P2' _chemical_formula_weight 492.35 _chemical_name_systematic ; 1,2-Bis(4'-pyridyl)ethane--phosphonopropionic acid (1/2) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 72.6340(14) _cell_angle_beta 73.1760(15) _cell_angle_gamma 87.386(2) _cell_formula_units_Z 1 _cell_length_a 7.5651(3) _cell_length_b 8.6472(3) _cell_length_c 9.0077(4) _cell_measurement_reflns_used 5037 _cell_measurement_temperature 150.0(10) _cell_measurement_theta_max 27.62 _cell_measurement_theta_min 2.82 _cell_volume 537.79(4) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'Kappa-CCD server software (Nonius, 1997)' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'PLATON (Spek, 2002)' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997a) and PRPKAPPA (Ferguson, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997b)' _diffrn_ambient_temperature 150.0(10) _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type Kappa-CCD _diffrn_measurement_method '\f scans, and \w scans with \k offsets' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.035 _diffrn_reflns_av_sigmaI/netI 0.0470 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 6047 _diffrn_reflns_theta_full 27.62 _diffrn_reflns_theta_max 27.62 _diffrn_reflns_theta_min 2.82 _diffrn_standards_decay_% negligible _exptl_absorpt_coefficient_mu 0.262 _exptl_absorpt_correction_T_max 0.973 _exptl_absorpt_correction_T_min 0.930 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_process_details 'DENZO-SMN (Otwinowski & Minor, 1997)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.520 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 258 _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.14 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.321 _refine_diff_density_min -0.365 _refine_ls_extinction_coef 0.022(7) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.057 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 148 _refine_ls_number_reflns 2457 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.057 _refine_ls_R_factor_all 0.0386 _refine_ls_R_factor_gt 0.0322 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0237P)^2^+0.2452P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0812 _refine_ls_wR_factor_ref 0.0851 _reflns_number_gt 2163 _reflns_number_total 2457 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file bm0061.cif _[local]_cod_data_source_block VI _[local]_cod_cif_authors_sg_Hall '-P -1' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N11 0.37635(17) 0.04194(14) 0.85339(16) 0.0206(3) Uani d . 1 N C12 0.2617(2) -0.04464(17) 0.99512(19) 0.0213(3) Uani d . 1 C C13 0.2703(2) -0.21093(17) 1.04550(18) 0.0203(3) Uani d . 1 C C14 0.39673(19) -0.28923(16) 0.94808(18) 0.0173(3) Uani d . 1 C C15 0.5144(2) -0.19391(17) 0.80193(19) 0.0215(3) Uani d . 1 C C16 0.5006(2) -0.02859(18) 0.75733(19) 0.0233(3) Uani d . 1 C C17 0.40381(19) -0.47121(16) 0.9967(2) 0.0210(3) Uani d . 1 C P1 0.22718(5) 0.39160(4) 0.61755(5) 0.01547(13) Uani d . 1 P O1 0.18632(15) 0.99449(12) 0.57217(14) 0.0262(3) Uani d . 1 O O2 -0.02062(17) 0.83045(13) 0.78710(15) 0.0325(3) Uani d . 1 O O3 0.30644(14) 0.45771(12) 0.42584(13) 0.0193(2) Uani d . 1 O O4 0.38859(13) 0.35962(11) 0.69065(13) 0.0189(2) Uani d . 1 O O5 0.09918(14) 0.24752(11) 0.66071(14) 0.0215(2) Uani d . 1 O C1 0.1045(2) 0.85194(16) 0.66337(19) 0.0189(3) Uani d . 1 C C2 0.1917(2) 0.71868(16) 0.59294(19) 0.0198(3) Uani d . 1 C C3 0.09578(19) 0.55173(15) 0.68156(18) 0.0173(3) Uani d . 1 C H11 0.3700 0.1481 0.8224 0.025 Uiso calc R 1 H H12 0.1746 0.0084 1.0608 0.026 Uiso calc R 1 H H13 0.1902 -0.2726 1.1467 0.024 Uiso calc R 1 H H15 0.6035 -0.2431 0.7337 0.026 Uiso calc R 1 H H16 0.5799 0.0365 0.6574 0.028 Uiso calc R 1 H H17A 0.3668 -0.5119 0.9178 0.025 Uiso calc R 1 H H17B 0.3140 -0.5176 1.1048 0.025 Uiso calc R 1 H H1 0.1425 1.0658 0.6170 0.039 Uiso calc R 1 H H3 0.3995 0.5199 0.4009 0.029 Uiso calc R 1 H H2A 0.3221 0.7122 0.5947 0.024 Uiso calc R 1 H H2B 0.1918 0.7484 0.4779 0.024 Uiso calc R 1 H H3A -0.0265 0.5517 0.6620 0.021 Uiso calc R 1 H H3B 0.0748 0.5298 0.7998 0.021 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N11 0.0242(6) 0.0130(5) 0.0258(7) 0.0038(5) -0.0090(5) -0.0065(5) C12 0.0184(7) 0.0204(7) 0.0263(8) 0.0053(5) -0.0047(6) -0.0112(6) C13 0.0178(7) 0.0201(7) 0.0198(7) 0.0007(5) -0.0009(6) -0.0058(6) C14 0.0165(7) 0.0151(6) 0.0205(7) 0.0015(5) -0.0058(6) -0.0051(5) C15 0.0233(7) 0.0168(7) 0.0209(8) 0.0036(5) -0.0007(6) -0.0065(6) C16 0.0248(8) 0.0193(7) 0.0208(8) 0.0004(6) -0.0010(6) -0.0039(6) C17 0.0190(7) 0.0144(7) 0.0272(8) 0.0010(5) -0.0041(6) -0.0051(6) P1 0.0148(2) 0.01102(18) 0.0200(2) 0.00057(12) -0.00161(14) -0.00699(14) O1 0.0290(6) 0.0130(5) 0.0321(7) -0.0007(4) 0.0031(5) -0.0118(4) O2 0.0374(7) 0.0198(5) 0.0320(7) 0.0004(5) 0.0079(5) -0.0128(5) O3 0.0179(5) 0.0194(5) 0.0207(6) -0.0019(4) -0.0024(4) -0.0089(4) O4 0.0173(5) 0.0149(5) 0.0228(6) 0.0018(4) -0.0042(4) -0.0049(4) O5 0.0186(5) 0.0134(5) 0.0311(6) -0.0011(4) -0.0002(4) -0.0112(4) C1 0.0190(7) 0.0142(6) 0.0243(8) 0.0018(5) -0.0042(6) -0.0090(6) C2 0.0195(7) 0.0139(6) 0.0250(8) 0.0011(5) -0.0013(6) -0.0094(6) C3 0.0162(7) 0.0133(6) 0.0218(7) 0.0010(5) -0.0019(5) -0.0079(5) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N11 C12 . 1.338(2) no N11 C16 . 1.340(2) no N11 H11 . 0.88 no C12 C13 . 1.377(2) no C12 H12 . 0.95 no C13 C14 . 1.397(2) no C13 H13 . 0.95 no C14 C15 . 1.395(2) no C14 C17 . 1.5052(18) no C15 C16 . 1.373(2) no C15 H15 . 0.95 no C16 H16 . 0.95 no C17 C17 2_647 1.528(3) no C17 H17A . 0.99 no C17 H17B . 0.99 no P1 O5 . 1.4980(10) no P1 O4 . 1.5254(11) no P1 O3 . 1.5846(11) no P1 C3 . 1.8048(14) no O1 C1 . 1.3222(17) no O1 H1 . 0.84 no O2 C1 . 1.2059(19) no O3 H3 . 0.84 no C1 C2 . 1.5134(19) no C2 C3 . 1.5234(18) no C2 H2A . 0.99 no C2 H2B . 0.99 no C3 H3A . 0.99 no C3 H3B . 0.99 no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C12 N11 C16 . . 121.84(13) no C12 N11 H11 . . 119.1 no C16 N11 H11 . . 119.1 no N11 C12 C13 . . 119.76(13) no N11 C12 H12 . . 120.1 no C13 C12 H12 . . 120.1 no C12 C13 C14 . . 120.16(14) no C12 C13 H13 . . 119.9 no C14 C13 H13 . . 119.9 no C15 C14 C13 . . 118.05(13) no C15 C14 C17 . . 120.61(13) no C13 C14 C17 . . 121.32(13) no C16 C15 C14 . . 119.54(14) no C16 C15 H15 . . 120.2 no C14 C15 H15 . . 120.2 no N11 C16 C15 . . 120.64(14) no N11 C16 H16 . . 119.7 no C15 C16 H16 . . 119.7 no C14 C17 C17 . 2_647 112.33(14) no C14 C17 H17A . . 109.1 no C17 C17 H17A 2_647 . 109.1 no C14 C17 H17B . . 109.1 no C17 C17 H17B 2_647 . 109.1 no H17A C17 H17B . . 107.9 no O5 P1 O4 . . 114.93(6) no O5 P1 O3 . . 108.77(6) no O4 P1 O3 . . 108.82(6) no O5 P1 C3 . . 108.77(6) no O4 P1 C3 . . 108.83(6) no O3 P1 C3 . . 106.38(6) no C1 O1 H1 . . 109.5 no P1 O3 H3 . . 109.5 no O2 C1 O1 . . 124.74(13) no O2 C1 C2 . . 124.54(13) no O1 C1 C2 . . 110.71(12) no C1 C2 C3 . . 114.53(12) no C1 C2 H2A . . 108.6 no C3 C2 H2A . . 108.6 no C1 C2 H2B . . 108.6 no C3 C2 H2B . . 108.6 no H2A C2 H2B . . 107.6 no C2 C3 P1 . . 112.83(10) no C2 C3 H3A . . 109.0 no P1 C3 H3A . . 109.0 no C2 C3 H3B . . 109.0 no P1 C3 H3B . . 109.0 no H3A C3 H3B . . 107.8 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag C16 N11 C12 C13 . 0.2(2) no N11 C12 C13 C14 . -0.8(2) no C12 C13 C14 C15 . 1.3(2) no C12 C13 C14 C17 . -177.40(13) no C13 C14 C15 C16 . -1.1(2) no C17 C14 C15 C16 . 177.54(14) no C12 N11 C16 C15 . -0.1(2) no C14 C15 C16 N11 . 0.5(2) no C15 C14 C17 C17 2_647 57.0(2) no C13 C14 C17 C17 2_647 -124.38(18) no O2 C1 C2 C3 . 6.2(2) no O1 C1 C2 C3 . -174.92(13) no C1 C2 C3 P1 . -169.43(10) no O5 P1 C3 C2 . -159.26(10) no O4 P1 C3 C2 . 74.85(12) no O3 P1 C3 C2 . -42.25(12) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N11 H11 O4 . 0.88 1.84 2.692(2) 161 y O1 H1 O5 1_565 0.84 1.73 2.542(2) 163 y O3 H3 O4 2_666 0.84 1.79 2.619(2) 168 y C12 H12 O2 2_567 0.95 2.29 3.224(2) 167 y C13 H13 O5 2_557 0.95 2.41 3.196(2) 139 y