#------------------------------------------------------------------------------ #$Date: 2010-01-30 13:59:17 +0000 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: svn://www.crystallography.net/cod/cif/2/2104078.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2104078 loop_ _publ_author_name 'van der Lee, A.' 'Rolland, M.' 'Marat, X.' 'Virieux, D.' 'Volle, J.-N.' 'Pirat, J.-L.' _publ_section_title ; Structure-directing weak phosphoryl XH···O=P (X = C, N) hydrogen bonds in cyclic oxazaphospholidines and oxazaphosphinanes ; _journal_coeditor_code GP5020 _journal_issue 2 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 196 _journal_page_last 205 _journal_volume 64 _journal_year 2008 _chemical_formula_moiety 'C22 H22 N1 O3 P1' _chemical_formula_sum 'C22 H22 N O3 P' _[local]_cod_chemical_formula_sum_orig 'C22 H22 N1 O3 P1' _chemical_formula_weight 379.40 _chemical_name_systematic ; (2R,3S,5S)-3,5-diphenyl-2-(4-methoxyphenyl)- [1,4,2]-oxazaphosphorinane2-oxide ; _space_group_IT_number 4 _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _audit_creation_method CRYSTALS_ver_12.84 _cell_angle_alpha 90 _cell_angle_beta 109.717(5) _cell_angle_gamma 90 _cell_formula_units_Z 2 _cell_length_a 10.0104(3) _cell_length_b 8.10560(10) _cell_length_c 12.5372(3) _cell_measurement_reflns_used 5384 _cell_measurement_temperature 175 _cell_measurement_theta_max 32.1481 _cell_measurement_theta_min 3.0417 _cell_volume 957.63(5) _computing_cell_refinement ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.27p5 beta (release 01-04-2005 CrysAlis171 .NET) (compiled Apr 1 2005,17:53:34) ; _computing_data_collection ; CrysAlis CCD, Oxford Diffraction Ltd., Version 1.171.27p5 beta (release 01-04-2005 CrysAlis171 .NET) (compiled Apr 1 2005,17:53:34) ; _computing_data_reduction ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.27p5 beta (release 01-04-2005 CrysAlis171 .NET) (compiled Apr 1 2005,17:53:34) ; _computing_molecular_graphics 'CAMERON (Watkin et al., 1996)' _computing_publication_material 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_refinement 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_solution 'SIR2002 (Burla et al., 2003)' _diffrn_ambient_temperature 175 _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.925 _diffrn_measurement_device_type 'Oxford Diffraction XCALIBUR' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Enhance (Mo) X-ray Source' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.028 _diffrn_reflns_av_sigmaI/netI 0.0893 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 12688 _diffrn_reflns_theta_full 29.318 _diffrn_reflns_theta_max 32.217 _diffrn_reflns_theta_min 3.315 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count '25 frames' _diffrn_standards_number '4 frames' _exptl_absorpt_coefficient_mu 0.166 _exptl_absorpt_correction_T_max 0.9674 _exptl_absorpt_correction_T_min 0.9515 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.27p5 beta (release 01-04-2005 CrysAlis171 .NET) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_crystal_colour 'translucent pale white' _exptl_crystal_density_diffrn 1.316 _exptl_crystal_description prism _exptl_crystal_F_000 400 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.23 _refine_diff_density_min -0.31 _refine_ls_abs_structure_details 'Flack (1983), 2104 Friedel-pairs' _refine_ls_abs_structure_Flack 0.18(12) _refine_ls_extinction_method None _refine_ls_goodness_of_fit_ref 1.1090 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 245 _refine_ls_number_reflns 3438 _refine_ls_number_restraints 1 _refine_ls_R_factor_all 0.0765 _refine_ls_R_factor_gt 0.0484 _refine_ls_shift/su_max 0.000432 _refine_ls_structure_factor_coef F _refine_ls_weighting_details ; Method, part 1, Chebychev polynomial, (Watkin, 1994, Prince, 1982) [weight] = 1.0/[A~0~*T~0~(x)+A~1~*T~1~(x) ... +A~n-1~]*T~n-1~(x)] where A~i~ are the Chebychev coefficients listed below and x= Fcalc/Fmax Method = Robust Weighting (Prince, 1982) W = [weight] * [1-(deltaF/6*sigmaF)^2^]^2^ A~i~ are: 18.4 -27.6 15.3 -5.81 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.0510 _refine_ls_wR_factor_gt 0.0456 _refine_ls_wR_factor_ref 0.0456 _reflns_number_gt 3438 _reflns_number_total 5435 _reflns_threshold_expression I>2.0\s(I) _[local]_cod_data_source_file gp5020.cif _[local]_cod_data_source_block VII _[local]_cod_cif_authors_sg_H-M 'P 1 21 1 ' loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,y+1/2,-z loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C 0.0033 0.0016 'International Tables Vol C 4.2.6.8 and 6.1.1.4' H 0.0000 0.0000 'International Tables Vol C 4.2.6.8 and 6.1.1.4' N 0.0061 0.0033 'International Tables Vol C 4.2.6.8 and 6.1.1.4' O 0.0106 0.0060 'International Tables Vol C 4.2.6.8 and 6.1.1.4' P 0.1023 0.0942 'International Tables Vol C 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy O O1 0.0586(2) 0.3623(3) 0.70204(17) 0.0324 Uani 1.0000 P P2 0.17060(7) 0.29948(12) 0.64536(6) 0.0264 Uani 1.0000 C C3 0.0934(3) 0.1060(4) 0.5795(2) 0.0249 Uani 1.0000 N N4 0.0470(2) 0.0104(3) 0.66095(18) 0.0252 Uani 1.0000 C C5 -0.0662(3) 0.0962(4) 0.6903(2) 0.0277 Uani 1.0000 C C6 -0.0044(3) 0.2494(4) 0.7600(3) 0.0344 Uani 1.0000 O O7 0.1877(2) 0.4236(3) 0.56487(17) 0.0359 Uani 1.0000 C C8 0.3354(3) 0.2597(3) 0.7574(2) 0.0232 Uani 1.0000 C C9 0.4500(3) 0.3598(4) 0.7613(2) 0.0275 Uani 1.0000 C C10 0.5794(3) 0.3441(4) 0.8479(2) 0.0306 Uani 1.0000 C C11 0.5949(3) 0.2265(4) 0.9319(2) 0.0292 Uani 1.0000 C C12 0.4836(3) 0.1235(4) 0.9289(2) 0.0286 Uani 1.0000 C C13 0.3545(3) 0.1402(3) 0.8415(2) 0.0282 Uani 1.0000 O O14 0.7256(2) 0.2236(3) 1.01393(18) 0.0428 Uani 1.0000 C C15 0.7473(4) 0.1052(5) 1.1036(3) 0.0508 Uani 1.0000 C C16 -0.1243(3) -0.0169(4) 0.7597(2) 0.0299 Uani 1.0000 C C17 -0.2701(3) -0.0354(4) 0.7342(3) 0.0381 Uani 1.0000 C C18 -0.3220(4) -0.1385(5) 0.8005(3) 0.0487 Uani 1.0000 C C19 -0.2307(4) -0.2228(5) 0.8906(3) 0.0516 Uani 1.0000 C C20 -0.0846(4) -0.2057(6) 0.9169(3) 0.0466 Uani 1.0000 C C21 -0.0332(3) -0.1028(4) 0.8517(3) 0.0370 Uani 1.0000 C C22 0.1987(3) 0.0132(4) 0.5395(2) 0.0250 Uani 1.0000 C C23 0.2648(3) -0.1298(4) 0.5915(2) 0.0312 Uani 1.0000 C C24 0.3631(3) -0.2097(5) 0.5538(3) 0.0385 Uani 1.0000 C C25 0.3984(3) -0.1446(4) 0.4645(3) 0.0369 Uani 1.0000 C C26 0.3319(3) -0.0031(4) 0.4109(3) 0.0356 Uani 1.0000 C C27 0.2325(3) 0.0744(4) 0.4476(2) 0.0316 Uani 1.0000 H H28 -0.0828 0.3070 0.7754 0.0439 Uiso 1.0000 H H29 0.0675 0.2139 0.8315 0.0439 Uiso 1.0000 H H30 -0.1435 0.1271 0.6199 0.0330 Uiso 1.0000 H H31 0.0165 -0.0880 0.6225 0.0500 Uiso 1.0000 H H32 0.0103 0.1377 0.5140 0.0327 Uiso 1.0000 H H33 0.2783 0.0690 0.8386 0.0344 Uiso 1.0000 H H34 0.4948 0.0418 0.9851 0.0348 Uiso 1.0000 H H35 0.6549 0.4141 0.8493 0.0364 Uiso 1.0000 H H36 0.4385 0.4410 0.7048 0.0340 Uiso 1.0000 H H37 0.6820 0.1291 1.1433 0.0564 Uiso 1.0000 H H38 0.8438 0.1168 1.1543 0.0564 Uiso 1.0000 H H39 0.7338 -0.0069 1.0728 0.0564 Uiso 1.0000 H H40 -0.3320 0.0211 0.6727 0.0459 Uiso 1.0000 H H41 -0.4205 -0.1479 0.7832 0.0656 Uiso 1.0000 H H42 -0.2664 -0.2917 0.9347 0.0614 Uiso 1.0000 H H43 -0.0210 -0.2639 0.9787 0.0601 Uiso 1.0000 H H44 0.0646 -0.0899 0.8696 0.0441 Uiso 1.0000 H H45 0.2443 -0.1731 0.6534 0.0366 Uiso 1.0000 H H46 0.4039 -0.3074 0.5883 0.0486 Uiso 1.0000 H H47 0.4680 -0.1983 0.4413 0.0471 Uiso 1.0000 H H48 0.3538 0.0409 0.3489 0.0466 Uiso 1.0000 H H49 0.1866 0.1707 0.4106 0.0395 Uiso 1.0000 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0302(10) 0.0273(10) 0.0379(11) 0.0056(9) 0.0094(9) -0.0018(9) P2 0.0260(3) 0.0255(3) 0.0239(3) 0.0013(4) 0.0031(2) 0.0023(3) C3 0.0255(13) 0.0306(15) 0.0185(11) -0.0032(11) 0.0073(10) -0.0003(10) N4 0.0274(12) 0.0297(12) 0.0217(11) -0.0031(10) 0.0122(9) -0.0037(9) C5 0.0211(13) 0.0363(16) 0.0234(13) 0.0019(12) 0.0046(10) -0.0010(12) C6 0.0340(15) 0.0398(18) 0.0292(14) 0.0029(13) 0.0104(12) -0.0019(12) O7 0.0367(12) 0.0344(11) 0.0317(11) 0.0001(10) 0.0052(9) 0.0100(9) C8 0.0245(12) 0.0247(15) 0.0184(11) 0.0004(10) 0.0048(9) -0.0027(9) C9 0.0294(13) 0.0276(13) 0.0258(13) -0.0014(12) 0.0097(11) 0.0053(11) C10 0.0248(13) 0.0321(16) 0.0343(14) -0.0052(11) 0.0093(11) 0.0066(11) C11 0.0263(14) 0.0318(15) 0.0245(13) 0.0003(12) 0.0022(10) -0.0013(11) C12 0.0300(14) 0.0282(15) 0.0263(13) -0.0028(12) 0.0077(11) 0.0068(11) C13 0.0293(15) 0.0251(14) 0.0273(14) -0.0062(12) 0.0058(11) 0.0023(11) O14 0.0319(12) 0.0490(14) 0.0374(12) -0.0085(11) -0.0016(9) 0.0168(11) C15 0.049(2) 0.053(2) 0.0354(17) -0.0080(18) -0.0063(15) 0.0194(16) C16 0.0238(13) 0.0403(17) 0.0277(14) -0.0009(12) 0.0114(11) -0.0071(12) C17 0.0246(14) 0.049(2) 0.0413(17) -0.0015(14) 0.0119(12) -0.0060(15) C18 0.0351(17) 0.067(2) 0.051(2) -0.0172(17) 0.0226(15) -0.0189(18) C19 0.058(2) 0.062(3) 0.0475(18) -0.017(2) 0.0346(17) -0.0074(18) C20 0.0529(19) 0.057(2) 0.0348(15) 0.001(2) 0.0210(14) 0.0038(19) C21 0.0274(15) 0.055(2) 0.0309(15) -0.0008(14) 0.0123(12) 0.0044(14) C22 0.0262(13) 0.0278(13) 0.0207(12) -0.0046(12) 0.0077(10) -0.0039(10) C23 0.0319(14) 0.0341(15) 0.0300(14) 0.0013(13) 0.0137(11) 0.0068(12) C24 0.0398(15) 0.0362(16) 0.0426(16) 0.0095(17) 0.0180(13) 0.0048(17) C25 0.0365(16) 0.0368(16) 0.0431(17) -0.0012(14) 0.0209(14) -0.0065(14) C26 0.0403(17) 0.0374(17) 0.0354(16) -0.0070(14) 0.0213(13) -0.0020(13) C27 0.0376(16) 0.0303(15) 0.0289(14) -0.0028(13) 0.0140(12) 0.0017(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 P2 1.600(2) yes O1 C6 1.440(4) yes P2 C3 1.818(3) yes P2 O7 1.475(2) yes P2 C8 1.799(3) yes C3 N4 1.476(3) yes C3 C22 1.512(4) yes C3 H32 0.986 no N4 C5 1.478(4) yes N4 H31 0.928 no C5 C6 1.524(4) yes C5 C16 1.509(4) yes C5 H30 0.990 no C6 H28 0.987 no C6 H29 0.984 no C8 C9 1.393(4) yes C8 C13 1.397(4) yes C9 C10 1.387(4) yes C9 H36 0.945 no C10 C11 1.390(4) yes C10 H35 0.941 no C11 C12 1.382(4) yes C11 O14 1.365(3) yes C12 C13 1.390(4) yes C12 H34 0.946 no C13 H33 0.948 no O14 C15 1.438(4) yes C15 H37 0.965 no C15 H38 0.965 no C15 H39 0.978 no C16 C17 1.393(4) yes C16 C21 1.392(4) yes C17 C18 1.396(5) yes C17 H40 0.931 no C18 C19 1.372(6) yes C18 H41 0.938 no C19 C20 1.394(5) yes C19 H42 0.937 no C20 C21 1.383(5) yes C20 H43 0.947 no C21 H44 0.933 no C22 C23 1.384(4) yes C22 C27 1.397(4) yes C23 C24 1.388(4) yes C23 H45 0.935 no C24 C25 1.387(4) yes C24 H46 0.929 no C25 C26 1.382(5) yes C25 H47 0.947 no C26 C27 1.381(4) yes C26 H48 0.945 no C27 H49 0.944 no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag P2 O1 C6 120.91(19) yes O1 P2 C3 102.82(12) yes O1 P2 O7 110.31(13) yes C3 P2 O7 114.03(13) yes O1 P2 C8 107.80(12) yes C3 P2 C8 109.70(12) yes O7 P2 C8 111.67(13) yes P2 C3 N4 108.90(17) yes P2 C3 C22 110.02(18) yes N4 C3 C22 112.7(2) yes P2 C3 H32 105.3 no N4 C3 H32 109.8 no C22 C3 H32 109.9 no C3 N4 C5 111.8(2) yes C3 N4 H31 102.5 no C5 N4 H31 112.8 no N4 C5 C6 109.2(2) yes N4 C5 C16 109.6(2) yes C6 C5 C16 109.0(2) yes N4 C5 H30 109.3 no C6 C5 H30 110.4 no C16 C5 H30 109.3 no C5 C6 O1 113.0(2) yes C5 C6 H28 107.6 no O1 C6 H28 108.1 no C5 C6 H29 108.3 no O1 C6 H29 109.6 no H28 C6 H29 110.2 no P2 C8 C9 116.75(19) yes P2 C8 C13 124.7(2) yes C9 C8 C13 118.5(2) yes C8 C9 C10 120.9(2) yes C8 C9 H36 119.3 no C10 C9 H36 119.7 no C9 C10 C11 119.5(3) yes C9 C10 H35 119.5 no C11 C10 H35 121.0 no C10 C11 C12 120.7(2) yes C10 C11 O14 114.6(3) yes C12 C11 O14 124.7(3) yes C11 C12 C13 119.3(3) yes C11 C12 H34 120.7 no C13 C12 H34 120.0 no C8 C13 C12 121.1(3) yes C8 C13 H33 119.3 no C12 C13 H33 119.6 no C11 O14 C15 117.0(3) yes O14 C15 H37 108.6 no O14 C15 H38 107.7 no H37 C15 H38 110.0 no O14 C15 H39 110.3 no H37 C15 H39 111.2 no H38 C15 H39 108.9 no C5 C16 C17 120.7(3) yes C5 C16 C21 120.6(3) yes C17 C16 C21 118.7(3) yes C16 C17 C18 120.0(3) yes C16 C17 H40 119.4 no C18 C17 H40 120.7 no C17 C18 C19 120.7(3) yes C17 C18 H41 119.0 no C19 C18 H41 120.3 no C18 C19 C20 120.0(3) yes C18 C19 H42 120.2 no C20 C19 H42 119.9 no C19 C20 C21 119.4(3) yes C19 C20 H43 120.5 no C21 C20 H43 120.2 no C16 C21 C20 121.4(3) yes C16 C21 H44 119.0 no C20 C21 H44 119.6 no C3 C22 C23 122.4(2) yes C3 C22 C27 119.1(3) yes C23 C22 C27 118.4(3) yes C22 C23 C24 120.8(3) yes C22 C23 H45 120.1 no C24 C23 H45 119.1 no C23 C24 C25 120.0(3) yes C23 C24 H46 119.4 no C25 C24 H46 120.6 no C24 C25 C26 119.8(3) yes C24 C25 H47 119.2 no C26 C25 H47 121.1 no C25 C26 C27 119.9(3) yes C25 C26 H48 120.4 no C27 C26 H48 119.7 no C22 C27 C26 121.1(3) yes C22 C27 H49 119.1 no C26 C27 H49 119.9 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N4 H31 O7 2_546 0.9300 2.5400 3.089(3) 118.00 yes C3 H32 O7 2_546 0.9900 2.5700 3.153(4) 118.00 yes C21 H44 O14 2_647 0.9300 2.6000 3.286(4) 131.00 yes _cod_database_code 2104078