#------------------------------------------------------------------------------ #$Date: 2014-10-25 18:23:10 +0100 (Sat, 25 Oct 2014) $ #$Revision: 125873 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/49/2104994.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2104994 loop_ _publ_author_name 'Siegler, Maxime A.' 'Hao, Xiang' 'Parkin, Sean' 'Brock, Carolyn Pratt' _publ_section_title ; [Ni(H~2~O)~6~](NO~3~)~2~·(15-crown-5)·2H~2~O: three phase transitions and an intermediate modulated phase stable over a range of ca 40K ; _journal_coeditor_code HW5018 _journal_issue 6 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 486 _journal_page_last 498 _journal_volume 67 _journal_year 2011 _chemical_formula_moiety 'C10 H20 O5, H12 Ni O6 2+, 2(N O3 1-), 2(H2 O)' _chemical_formula_sum 'C10 H36 N2 Ni O19' _chemical_formula_weight 547.12 _chemical_name_systematic 'hexaquanickel(II) nitrate (15-crown-5) dihydrate' _space_group_IT_number 12 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-I 2y' _symmetry_space_group_name_H-M 'I 1 2/m 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 101.48(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 12.370(2) _cell_length_b 12.570(2) _cell_length_c 8.11400(10) _cell_measurement_reflns_used 1481 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 1.00 _cell_volume 1236.4(3) _computing_cell_refinement 'DENZO-SMN (Nonius, 1997)' _computing_data_collection 'COLLECT (Nonius, 1997)' _computing_data_reduction 'DENZO-SMN (Nonius, 1997)' _computing_molecular_graphics 'Mercury (Macrae et al., 2008)' _computing_publication_material 'SHELX-97 and local procedures' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 294(2) _diffrn_detector_area_resol_mean 18 _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Nonius KappaCCD diffractometer' _diffrn_measurement_method '\w scans at fixed \c = 55\%' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0366 _diffrn_reflns_av_sigmaI/netI 0.0474 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 2838 _diffrn_reflns_theta_full 27.49 _diffrn_reflns_theta_max 27.49 _diffrn_reflns_theta_min 2.33 _diffrn_standards_decay_% <2 _exptl_absorpt_coefficient_mu 0.868 _exptl_absorpt_correction_T_max 0.9579 _exptl_absorpt_correction_T_min 0.7510 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'Scalepack (Otwinowski & Minor, 2006)' _exptl_crystal_colour 'pale green' _exptl_crystal_density_diffrn 1.470 _exptl_crystal_density_method 'not measured' _exptl_crystal_description 'elongated parallelepiped' _exptl_crystal_F_000 580 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.438 _refine_diff_density_min -0.330 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.019 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 144 _refine_ls_number_reflns 1487 _refine_ls_number_restraints 31 _refine_ls_restrained_S_all 1.012 _refine_ls_R_factor_all 0.0689 _refine_ls_R_factor_gt 0.0492 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0845P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1207 _refine_ls_wR_factor_ref 0.1313 _reflns_number_gt 1162 _reflns_number_total 1487 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file hw5018.cif _[local]_cod_data_source_block 294K_I _[local]_cod_cif_authors_sg_H-M 'I 2/m' _cod_database_code 2104994 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z' 'x+1/2, y+1/2, z+1/2' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z' '-x+1/2, -y+1/2, -z+1/2' 'x+1/2, -y+1/2, z+1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_disorder_assembly _atom_site_disorder_group O O1 -0.1828(7) 0.0000 0.4772(9) 0.084(3) Uani d SPDU 0.50 2 A -1 C C1 -0.2219(8) 0.0954(7) 0.3946(12) 0.088(2) Uani d PDU 0.50 1 A -1 H H1A -0.2975 0.1067 0.4063 0.105 Uiso calc PR 0.50 1 A -1 H H1B -0.2217 0.0881 0.2756 0.105 Uiso calc PR 0.50 1 A -1 C C2 -0.1558(7) 0.1895(8) 0.4600(14) 0.087(3) Uani d PDU 0.50 1 A -1 H H2A -0.1832 0.2520 0.3947 0.105 Uiso calc PR 0.50 1 A -1 H H2B -0.1607 0.2021 0.5763 0.105 Uiso calc PR 0.50 1 A -1 O O2 -0.0454(4) 0.1695(4) 0.4480(7) 0.0942(15) Uani d PDU 0.50 1 A -1 C C3 0.0310(8) 0.2425(6) 0.5355(15) 0.111(3) Uani d PDU 0.50 1 A -1 H H3A 0.0218 0.2505 0.6508 0.133 Uiso calc PR 0.50 1 A -1 H H3B 0.0233 0.3116 0.4810 0.133 Uiso calc PR 0.50 1 A -1 C C4 0.1391(11) 0.1936(13) 0.528(2) 0.138(6) Uani d PDU 0.50 1 A -1 H H4A 0.1375 0.1669 0.4157 0.166 Uiso calc PR 0.50 1 A -1 H H4B 0.1963 0.2474 0.5525 0.166 Uiso calc PR 0.50 1 A -1 O O3 0.1643(6) 0.1103(6) 0.6434(10) 0.124(2) Uani d PDU 0.50 1 A -1 C C5 0.2630(12) 0.0523(16) 0.688(3) 0.132(6) Uani d PDU 0.25 1 A -1 H H5A 0.2761 0.0321 0.8052 0.158 Uiso calc PR 0.25 1 A -1 H H5B 0.3251 0.0941 0.6677 0.158 Uiso calc PR 0.25 1 A -1 C C6 0.2474(16) -0.0426(18) 0.579(3) 0.095(6) Uani d PDU 0.25 1 A -1 H H6A 0.325(4) -0.056(10) 0.626(19) 0.114 Uiso d PD 0.25 1 B -1 H H6B 0.211(9) -0.095(10) 0.498(19) 0.114 Uiso d PD 0.25 1 C -1 Ni Ni 0.0000 0.0000 0.0000 0.0446(3) Uani d S 1 4 . . O O6 -0.0202(3) 0.0000 -0.2558(4) 0.0870(11) Uani d SD 1 2 . . H H6 0.012(3) 0.048(3) -0.289(6) 0.131 Uiso d D 1 1 . . O O8 -0.11796(18) 0.11443(19) -0.0136(3) 0.0816(7) Uani d D 1 1 . . H H8C -0.176(2) 0.108(3) -0.084(4) 0.122 Uiso d D 1 1 . . H H8D -0.097(3) 0.1750(19) -0.018(6) 0.122 Uiso d D 1 1 . . N N1 0.3747(3) 0.0000 0.2201(6) 0.0930(13) Uani d S 1 2 . . O O12 0.3260(2) 0.0847(2) 0.1931(4) 0.1219(11) Uani d . 1 1 . . O O13 0.4709(4) 0.0000 0.2930(8) 0.158(2) Uani d S 1 2 . . O O18 0.0000 0.3087(4) 0.0000 0.1294(16) Uani d SD 1 2 . . H H18 0.041(6) 0.331(5) 0.087(6) 0.194 Uiso d D 1 1 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.070(5) 0.110(6) 0.067(5) -0.024(12) -0.002(4) 0.034(10) C1 0.060(5) 0.130(7) 0.074(6) 0.047(4) 0.018(5) 0.020(5) C2 0.121(4) 0.081(5) 0.065(6) 0.063(4) 0.031(5) 0.018(5) O2 0.115(4) 0.076(3) 0.101(4) -0.005(3) 0.046(3) -0.020(3) C3 0.176(6) 0.056(4) 0.105(10) -0.029(4) 0.041(7) -0.011(5) C4 0.134(5) 0.146(13) 0.148(15) -0.056(7) 0.056(9) 0.009(8) O3 0.090(4) 0.124(5) 0.173(7) -0.032(4) 0.061(4) 0.004(5) C5 0.076(10) 0.202(16) 0.120(16) -0.022(8) 0.024(12) -0.045(9) C6 0.056(9) 0.159(14) 0.073(11) -0.008(9) 0.019(8) 0.003(11) Ni 0.0395(4) 0.0502(4) 0.0443(4) 0.000 0.0090(2) 0.000 O6 0.069(2) 0.147(4) 0.0484(15) 0.000 0.0178(14) 0.000 O8 0.0562(12) 0.0669(14) 0.1136(19) 0.0137(10) -0.0028(12) -0.0149(14) N1 0.062(3) 0.113(4) 0.096(3) 0.000 -0.004(2) 0.000 O12 0.0830(19) 0.108(2) 0.160(3) -0.0071(17) -0.0118(17) 0.042(2) O13 0.070(3) 0.160(5) 0.213(6) 0.000 -0.049(3) 0.000 O18 0.157(5) 0.057(2) 0.178(5) 0.000 0.042(4) 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 C1 C2 . . 113.4(8) no O1 C1 H1A . . 108.9 no C2 C1 H1A . . 108.9 no O1 C1 H1B . . 108.9 no C2 C1 H1B . . 108.9 no H1A C1 H1B . . 107.7 no O2 C2 C1 . . 107.9(7) no O2 C2 H2A . . 110.1 no C1 C2 H2A . . 110.1 no O2 C2 H2B . . 110.1 no C1 C2 H2B . . 110.1 no H2A C2 H2B . . 108.4 no C3 O2 C2 . . 114.3(7) no O2 C3 C4 . . 103.3(10) no O2 C3 H3A . . 111.1 no C4 C3 H3A . . 111.1 no O2 C3 H3B . . 111.1 no C4 C3 H3B . . 111.1 no H3A C3 H3B . . 109.1 no O3 C4 C3 . . 111.5(10) no O3 C4 H4A . . 109.3 no C3 C4 H4A . . 109.3 no O3 C4 H4B . . 109.3 no C3 C4 H4B . . 109.3 no H4A C4 H4B . . 108.0 no C4 O3 C5 . . 128.7(12) no O3 C5 C6 . . 105.3(15) no O3 C5 H5A . . 110.7 no C6 C5 H5A . . 110.7 no O3 C5 H5B . . 110.7 no C6 C5 H5B . . 110.7 no H5A C5 H5B . . 108.8 no C5 C6 H6A . . 84(7) no C5 C6 H6B . . 160(8) no H6A C6 H6B . . 116(4) no O8 Ni O8 6 5 90.11(14) no O8 Ni O8 6 . 89.89(14) no O8 Ni O8 5 . 180.0 no O8 Ni O8 6 2 180.0 no O8 Ni O8 5 2 89.89(14) no O8 Ni O8 . 2 90.11(14) no O8 Ni O6 6 5 89.80(10) no O8 Ni O6 5 5 90.20(10) no O8 Ni O6 . 5 89.80(10) no O8 Ni O6 2 5 90.20(10) no O8 Ni O6 6 . 90.20(10) no O8 Ni O6 5 . 89.80(10) no O8 Ni O6 . . 90.20(10) no O8 Ni O6 2 . 89.80(10) no O6 Ni O6 5 . 180.0 no Ni O6 H6 . . 112(3) no Ni O8 H8C . . 119(3) no Ni O8 H8D . . 116(3) no H8C O8 H8D . . 107(3) no O13 N1 O12 . 6 119.1(2) no O13 N1 O12 . . 119.1(2) no O12 N1 O12 6 . 121.3(4) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 . 1.411(7) no C1 C2 . 1.475(9) no C1 H1A . 0.9700 no C1 H1B . 0.9700 no C2 O2 . 1.411(8) no C2 H2A . 0.9700 no C2 H2B . 0.9700 no O2 C3 . 1.404(6) no C3 C4 . 1.484(9) no C3 H3A . 0.9700 no C3 H3B . 0.9700 no C4 O3 . 1.396(9) no C4 H4A . 0.9700 no C4 H4B . 0.9700 no O3 C5 . 1.406(10) no C5 C6 . 1.474(10) no C5 H5A . 0.9700 no C5 H5B . 0.9700 no C6 H6A . 0.97(2) no C6 H6B . 0.97(2) no Ni O8 6 2.036(2) no Ni O8 5 2.036(2) no Ni O8 . 2.036(2) no Ni O8 2 2.036(2) no Ni O6 5 2.040(3) no Ni O6 . 2.040(3) no O6 H6 . 0.795(18) no O8 H8C . 0.824(18) no O8 H8D . 0.805(18) no N1 O13 . 1.219(6) no N1 O12 6 1.221(3) no N1 O12 . 1.221(3) no O18 H18 . 0.83(2) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O6 H6 O2 2 0.795(18) 2.10(2) 2.852(5) 159(4) O6 H6 O3 1_554 0.795(18) 2.21(3) 2.923(7) 149(4) O8 H8C O12 2 0.824(18) 1.92(2) 2.719(3) 164(4) O8 H8D O18 . 0.805(18) 2.056(19) 2.835(5) 163(4) O18 H18 O12 7 0.83(2) 2.42(2) 3.240(4) 170(7) O18 H18 O13 7 0.83(2) 2.36(6) 2.914(5) 125(6) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 C1 C2 O2 56.3(11) no C1 C2 O2 C3 -168.0(7) no C2 O2 C3 C4 170.3(10) no O2 C3 C4 O3 -77.3(15) no C3 C4 O3 C5 -172.5(14) no C4 O3 C5 C6 -94(2) no _cod_database_fobs_code 2104994 _journal_paper_doi 10.1107/S0108768111045897