#------------------------------------------------------------------------------ #$Date: 2023-12-05 14:52:22 +0000 (Tue, 05 Dec 2023) $ #$Revision: 288039 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/50/2105051.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2105051 loop_ _publ_author_name 'Gemmi, Mauro' 'Campostrini, Italo' 'Demartin, Francesco' 'Gorelik, Tatiana E.' 'Gramaccioli, Carlo Maria' _publ_section_title ; Structure of the new mineral sarrabusite, Pb~5~CuCl~4~(SeO~3~)~4~, solved by manual electron-diffraction tomography ; _journal_coeditor_code DK5002 _journal_issue 1 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 15 _journal_page_last 23 _journal_paper_doi 10.1107/S010876811104688X _journal_volume 68 _journal_year 2012 _chemical_compound_source 'Baccu Locci mine, near Villaputzu, Sardinia, Italy' _chemical_formula_structural 'Pb5 Cu Cl4 (Se O3)4 ' _chemical_formula_sum 'Cl4 Cu O12 Pb5 Se4' _chemical_formula_weight 1749.190 _chemical_name_mineral Sarrabusite _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _cell_angle_alpha 90 _cell_angle_beta 101.770(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 24.917(3) _cell_length_b 5.5060(10) _cell_length_c 14.242(2) _cell_measurement_temperature 293 _cell_volume 1912.8(5) _computing_cell_refinement ; UNITCELL (Holland, Redfern, (1997). Mineralogical Magazine, 61, 65-77. ) ; _computing_data_collection ' QED (Belletti, Calestani, Gemmi, Migliori, Ultramicroscopy, 2000, 81, 57-65)' _computing_structure_refinement ; Petricek, V., Dusek, M. & Palatinus L. (2006). Jana2006. Structure Determination Software Programs. Institute of Physics, Praha, Czech Republic. ; _computing_structure_solution ; SIR2008 (Burla, Caliandro, Camalli, Carrozzini, Cascarano, De Caro, Giacovazzo, Polidori, Siliqi, Spagna, R (2007). J. Appl. Cryst. 40, 609-613) ; _database_code_amcsd 0018632 _diffrn_ambient_temperature 293 _diffrn_measured_fraction_theta_full 0.66 _diffrn_measured_fraction_theta_max 0.64 _diffrn_measurement_device_type 'FEI TECNAI F20ST' _diffrn_measurement_method 'manual diffraction tomography' _diffrn_radiation_source 'field emission electron gun' _diffrn_radiation_type electron _diffrn_radiation_wavelength 0.0251 _diffrn_reflns_av_R_equivalents 0.2546 _diffrn_reflns_av_sigmaI/netI 0.0117 _diffrn_reflns_limit_h_max 27 _diffrn_reflns_limit_h_min -27 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 2614 _diffrn_reflns_theta_full 0.49 _diffrn_reflns_theta_max 0.81 _diffrn_reflns_theta_min 0.06 _exptl_crystal_density_diffrn 6.0718 _exptl_crystal_F_000 2956 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 26.69 _refine_ls_number_constraints 5 _refine_ls_number_parameters 43 _refine_ls_number_reflns 915 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.3071 _refine_ls_R_factor_gt 0.3069 _refine_ls_shift/su_max 0.0204 _refine_ls_shift/su_mean 0.0055 _refine_ls_structure_factor_coef F _refine_ls_weighting_details w=1/(\s^2^(F)+0.0001F^2^) _refine_ls_weighting_scheme sigma _refine_ls_wR_factor_gt 0.4145 _refine_ls_wR_factor_ref 0.4145 _reflns_number_gt 914 _reflns_number_total 915 _reflns_threshold_expression I>3\s(I) _cod_data_source_file dk5002.cif _cod_data_source_block I _cod_original_formula_sum 'Cl4 Cu O12 Pb5 Se4 ' _cod_related_suboptimal_entry_code 9017922 _cod_database_code 2105051 _cod_database_fobs_code 2105051 loop_ _symmetry_equiv_pos_site_id _space_group_symop_operation_xyz 1 x,y,z 2 -x,y,-z+1/2 3 -x,-y,-z 4 x,-y,z+1/2 5 x+1/2,y+1/2,z 6 -x+1/2,y+1/2,-z+1/2 7 -x+1/2,-y+1/2,-z 8 x+1/2,-y+1/2,z+1/2 loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy _atom_site_symmetry_multiplicity Pb Pb1 0.1059(3) 0.0639(14) 0.1742(8) 0.031(3) Uiso d 1 8 Pb Pb2 0.2686(3) 0.0123(13) 0.3721(9) 0.031(3) Uiso d 1 8 Pb Pb3 0 0.562(2) 0.25 0.031(3) Uiso d 1 4 Se Se1 0.1626(6) 1.508(2) 0.3293(15) 0.019(3) Uiso d 1 8 Se Se2 0.0461(6) 0.003(2) 0.4147(15) 0.019(3) Uiso d 1 8 Cu Cu1 0 0.5 0.5 0.020(5) Uiso d 1 4 Cl Cl1 0.2971(11) 0.490(4) 0.456(3) 0.037(5) Uiso d 1 8 Cl Cl2 0.1203(11) 0.507(4) 0.534(3) 0.037(5) Uiso d 1 8 O O1 0.1810(15) 0.730(7) 0.270(4) 0.019(4) Uiso d 1 8 O O2 0.0641(15) 0.932(7) 0.309(4) 0.019(4) Uiso d 1 8 O O3 0.1886(14) 0.247(7) 0.285(4) 0.019(4) Uiso d 1 8 O O4 0.0067(15) 0.263(6) 0.382(4) 0.019(4) Uiso d 1 8 O O5 -0.0173(14) 0.807(6) 0.404(4) 0.019(4) Uiso d 1 8 O O6 0.1033(15) 0.430(7) 0.254(4) 0.019(4) Uiso d 1 8 loop_ _atom_type_symbol Pb Cu Se Cl O loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance Pb1 Cl1 6_545 3.36(4) Pb1 Cl2 4_564 3.16(3) Pb1 O1 1_545 2.77(4) Pb1 O2 1_545 2.47(5) Pb1 O3 . 2.54(4) Pb1 O4 2_555 2.96(4) Pb1 O5 2_545 2.67(4) Pb1 O6 . 2.32(4) Pb2 Cl1 1_545 3.14(3) Pb2 Cl1 . 2.91(3) Pb2 Cl1 7_556 3.21(4) Pb2 Cl2 7_556 2.82(3) Pb2 O1 1_545 2.83(4) Pb2 O1 6_545 2.85(5) Pb2 O3 . 2.48(4) Pb2 O3 6_545 3.04(5) Pb3 O2 . 2.62(4) Pb3 O2 2_555 2.62(4) Pb3 O4 . 2.48(5) Pb3 O4 2_555 2.48(5) Pb3 O5 . 2.69(5) Pb3 O5 2_555 2.69(5) Pb3 O6 . 2.67(4) Pb3 O6 2_555 2.67(4) Se1 Cl2 1_565 3.29(5) Se1 O1 1_565 1.61(5) Se1 O2 1_565 3.36(4) Se1 O3 1_565 1.74(4) Se1 O6 1_565 1.69(4) Se2 O2 1_545 1.70(6) Se2 O4 . 1.75(4) Se2 O5 1_545 1.89(4) Se2 O5 3_566 3.00(5) Cu1 Cl2 . 2.94(3) Cu1 Cl2 3_566 2.94(3) Cu1 O4 . 2.17(5) Cu1 O4 3_566 2.17(5) Cu1 O5 . 2.16(4) Cu1 O5 3_566 2.16(4) loop_ _cod_changelog_entry_id _cod_changelog_entry_author _cod_changelog_entry_date _cod_changelog_entry_text 1 'Vaitkus, Antanas' 2018-03-23 ; Split the '_atom_type_symbol' data value into several looped values. ; loop_ _cod_entry_issue_id _cod_entry_issue_author _cod_entry_issue_date _cod_entry_issue_severity _cod_entry_issue_origin _cod_entry_issue_description 1 AMCSD 2021-11-08 note upstream ; Manual data, this is the preferred structure. ; loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code _cod_related_entry_description 1 AMCSD 0018632 . 2 Wikidata Q19861259 'Sarrabusite, selenite mineral'