#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2200427.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200427 loop_ _publ_author_name 'Subha Nandhini, M.' 'Krishnakumar, R. V.' 'Natarajan, S.' _publ_section_title ; DL-Alaninium oxalate ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o666 _journal_page_last o668 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C3 H8 N O2 1+, C2 H O4 1-' _chemical_formula_moiety 'C3 H8 N O2 1+, C2 H O4 1-' _chemical_formula_sum 'C5 H9 N O6' _chemical_formula_weight 179.13 _chemical_name_common 'DL-alaninium oxalate' _chemical_name_systematic ; DL-alaninium oxalate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 94.48(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.662(2) _cell_length_b 7.342(2) _cell_length_c 19.157(6) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 14 _cell_measurement_theta_min 6 _cell_volume 793.9(4) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'CAD-4 Software' _computing_molecular_graphics 'PLATON (Spek, 1999)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .920 _diffrn_measured_fraction_theta_max .920 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type Mok\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0111 _diffrn_reflns_av_sigmaI/netI .0159 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 22 _diffrn_reflns_limit_l_min -22 _diffrn_reflns_number 1542 _diffrn_reflns_theta_full 24.92 _diffrn_reflns_theta_max 24.92 _diffrn_reflns_theta_min 2.13 _diffrn_standards_decay_% .1 _diffrn_standards_interval_time 60 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu .140 _exptl_absorpt_correction_T_max .97 _exptl_absorpt_correction_T_min .89 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.499 _exptl_crystal_density_meas 1.50 _exptl_crystal_density_method 'floatation in a mixture of xylene and bromoform' _exptl_crystal_description needle _exptl_crystal_F_000 376 _exptl_crystal_size_max .48 _exptl_crystal_size_mid .32 _exptl_crystal_size_min .22 _refine_diff_density_max .286 _refine_diff_density_min -.214 _refine_ls_extinction_coef .016(4) _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.123 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 112 _refine_ls_number_reflns 1390 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.123 _refine_ls_R_factor_all .0574 _refine_ls_R_factor_gt .0443 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0529P)^2^+0.5084P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .1260 _reflns_number_gt 1103 _reflns_number_total 1390 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file cf6092.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2200427 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 .8597(4) .7994(3) .47437(10) .0640(6) Uani d . 1 O H1 .8872 .7638 .4353 .096 Uiso calc R 1 H O2 .7452(3) .5134(2) .48762(8) .0440(5) Uani d . 1 O O3 .0945(3) .7374(3) .81048(8) .0468(5) Uani d . 1 O H3 -.0384 .7229 .7910 .070 Uiso calc R 1 H O4 .2081(3) .6750(4) .70572(9) .0749(8) Uani d . 1 O O5 .5443(3) .7832(2) .85896(7) .0424(5) Uani d . 1 O O6 .6636(3) .7056(3) .75614(8) .0479(5) Uani d . 1 O N1 .6243(3) .5701(3) .61814(9) .0395(5) Uani d . 1 N H1A .7135 .4708 .6161 .059 Uiso calc R 1 H H1B .4820 .5490 .5966 .059 Uiso calc R 1 H H1C .6090 .5983 .6627 .059 Uiso calc R 1 H C1 .7808(4) .6655(4) .50960(12) .0391(6) Uani d . 1 C C2 .7377(5) .7225(3) .58355(12) .0441(6) Uani d . 1 C H2 .8916 .7462 .6090 .053 Uiso calc R 1 H C3 .5910(7) .8905(4) .58644(16) .0766(10) Uani d . 1 C H3A .5698 .9197 .6344 .115 Uiso calc R 1 H H3B .4392 .8701 .5617 .115 Uiso calc R 1 H H3C .6695 .9897 .5651 .115 Uiso calc R 1 H C4 .5086(3) .7357(3) .79733(10) .0312(5) Uani d . 1 C C5 .2518(3) .7132(3) .76556(10) .0335(5) Uani d . 1 C loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0888(16) .0609(12) .0469(11) .0031(11) .0358(11) .0044(9) O2 .0367(9) .0617(12) .0341(9) -.0010(8) .0068(7) -.0080(8) O3 .0200(8) .0839(13) .0371(9) -.0035(8) .0072(6) -.0130(8) O4 .0291(9) .158(2) .0372(10) .0009(11) .0007(7) -.0360(12) O5 .0285(8) .0726(12) .0267(8) -.0081(8) .0053(6) -.0110(7) O6 .0208(7) .0938(14) .0298(8) -.0022(8) .0064(6) -.0134(8) N1 .0435(11) .0528(12) .0228(9) .0063(9) .0063(7) -.0019(8) C1 .0324(12) .0545(15) .0312(11) .0059(11) .0068(9) .0023(11) C2 .0462(13) .0568(15) .0298(11) -.0030(11) .0072(10) -.0041(11) C3 .121(3) .0573(19) .0565(18) .0166(18) .0382(19) -.0017(14) C4 .0215(10) .0473(13) .0255(10) -.0026(9) .0049(8) -.0038(9) C5 .0215(10) .0499(13) .0293(11) -.0014(9) .0043(8) -.0082(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 O1 H1 109.5 C5 O3 H3 109.5 C2 N1 H1A 109.5 C2 N1 H1B 109.5 H1A N1 H1B 109.5 C2 N1 H1C 109.5 H1A N1 H1C 109.5 H1B N1 H1C 109.5 O2 C1 O1 125.3(2) O2 C1 C2 123.3(2) O1 C1 C2 111.4(2) N1 C2 C3 110.3(2) N1 C2 C1 108.5(2) C3 C2 C1 113.3(2) N1 C2 H2 108.2 C3 C2 H2 108.2 C1 C2 H2 108.2 C2 C3 H3A 109.5 C2 C3 H3B 109.5 H3A C3 H3B 109.5 C2 C3 H3C 109.5 H3A C3 H3C 109.5 H3B C3 H3C 109.5 O5 C4 O6 125.93(19) O5 C4 C5 119.18(17) O6 C4 C5 114.88(17) O4 C5 O3 124.8(2) O4 C5 C4 121.69(18) O3 C5 C4 113.49(17) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.290(3) O1 H1 .820 O2 C1 1.205(3) O3 C5 1.298(2) O3 H3 .820 O4 C5 1.187(3) O5 C4 1.233(2) O6 C4 1.245(2) N1 C2 1.472(3) N1 H1A .890 N1 H1B .890 N1 H1C .890 C1 C2 1.516(3) C2 C3 1.491(4) C2 H2 .980 C3 H3A .960 C3 H3B .960 C3 H3C .960 C4 C5 1.541(3) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1 H1 O5 4_675 .82 1.80 2.591(2) 160.6 O3 H3 O6 1_455 .82 1.77 2.587(2) 174.0 N1 H1A O5 2_646 .89 1.98 2.834(3) 161.1 N1 H1B O2 3_666 .89 2.03 2.863(3) 154.2 N1 H1C O6 . .89 1.96 2.818(2) 162.0 C2 H2 O4 1_655 .98 2.53 3.423(3) 151.6 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O2 C1 C2 N1 -6.2(3) yes O1 C1 C2 N1 174.0(2) yes O2 C1 C2 C3 -129.1(3) yes O1 C1 C2 C3 51.0(3) yes O5 C4 C5 O4 176.9(3) ? O6 C4 C5 O4 -2.1(4) ? O5 C4 C5 O3 -4.0(3) ? O6 C4 C5 O3 177.1(2) ?