#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/04/2200467.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200467 loop_ _publ_author_name 'Mari\'an \O-isopropylidene-\b-D-erythro-hexo-2,3-diulo-2,6-pyranose _journal_issue 8 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o672 _journal_page_last o674 _journal_paper_doi 10.1107/S160053680101073X _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C12 H18 O6' _chemical_formula_moiety 'C12 H18 O6' _chemical_formula_sum 'C12 H18 O6' _chemical_formula_weight 258.265 _chemical_name_systematic ; 1,2:4,5-di-O-isopropylidene-\b-D-erythro-hexo-2,3-diulo-2,6 -pyranose ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _cell_angle_alpha 90.00 _cell_angle_beta 100.5260(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.9909(2) _cell_length_b 10.5488(2) _cell_length_c 11.3876(2) _cell_measurement_reflns_used 6790 _cell_measurement_temperature 297(2) _cell_measurement_theta_max 25.49 _cell_measurement_theta_min 1.82 _cell_volume 1298.07(4) _computing_cell_refinement 'SAINT (Siemens, 1995)' _computing_data_collection 'SMART (Siemens, 1995)' _computing_data_reduction 'SAINT and XPREP (Siemens, 1995)' _computing_molecular_graphics 'DIAMOND (Brandenburg, 2000)' _computing_publication_material 'PLATON (Spek, 2001)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'XFPA98 (Pavel\2\s(I) _cod_data_source_file cv6035.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas ; _cod_original_sg_symbol_H-M 'P 21' _cod_database_code 2200467 _cod_database_fobs_code 2200467 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1A .46357(13) -.35918(16) .92957(16) .0640(5) Uani d . 1 . . O O2A .31122(12) -.25867(15) .99815(12) .0490(3) Uani d . 1 . . O O3A .18110(15) -.52697(17) .96094(18) .0780(5) Uani d . 1 . . O O4A -.04943(13) -.43655(16) .97465(15) .0633(5) Uani d . 1 . . O O5A -.07792(13) -.31714(15) .80614(13) .0569(4) Uani d . 1 . . O O6A .18493(12) -.25455(14) .80892(11) .0457(3) Uani d . 1 . . O C1A .35509(18) -.3934(2) .8511(2) .0527(5) Uani d . 1 . . C H1A1 .3445 -.4847 .8493 .079(8) Uiso calc R 1 . . H H1A2 .3572 -.3638 .7709 .073(8) Uiso calc R 1 . . H C2A .25187(16) -.32976(19) .90008(17) .0409(4) Uani d . 1 . . C C3A .16267(18) -.4155(2) .94876(18) .0465(5) Uani d . 1 . . C C4A .05006(18) -.3531(2) .98146(18) .0481(5) Uani d . 1 . . C H4A .0711 -.3191 1.0627 .058(6) Uiso calc R 1 . . H C5A -.00039(18) -.2480(2) .89689(18) .0495(5) Uani d . 1 . . C H5A -.0502 -.1899 .9359 .061(6) Uiso calc R 1 . . H C6A .09507(19) -.1751(2) .8465(2) .0525(5) Uani d . 1 . . C H6A1 .0543 -.1254 .7790 .066(7) Uiso calc R 1 . . H H6A2 .1364 -.1167 .9067 .058(7) Uiso calc R 1 . . H C7A .43973(18) -.2468(2) .9890(2) .0535(5) Uani d . 1 . . C C8A .4591(3) -.1314(3) .9176(3) .0748(8) Uani d . 1 . . C H8A1 .5441 -.1271 .9085 .093(9) Uiso calc R 1 . . H H8A2 .4384 -.0569 .9583 .092(9) Uiso calc R 1 . . H H8A3 .4070 -.1364 .8402 .084(9) Uiso calc R 1 . . H C9A .5153(2) -.2488(4) 1.1115(2) .0846(9) Uani d . 1 . . C H9A1 .4956 -.3233 1.1527 .087(10) Uiso calc R 1 . . H H9A2 .4973 -.1747 1.1543 .105(12) Uiso calc R 1 . . H H9A3 .6015 -.2496 1.1067 .088(9) Uiso calc R 1 . . H C10A -.1300(2) -.4180(3) .8613(2) .0638(7) Uani d . 1 . . C C11A -.1310(4) -.5329(4) .7862(4) .1112(12) Uani d . 1 . . C H11A -.1834 -.5188 .7102 .154(17) Uiso calc R 1 . . H H11B -.1620 -.6035 .8252 .165(18) Uiso calc R 1 . . H H11C -.0484 -.5510 .7747 .112(12) Uiso calc R 1 . . H C12A -.2548(2) -.3830(5) .8859(4) .1153(15) Uani d . 1 . . C H12A -.2490 -.3049 .9299 .17(2) Uiso calc R 1 . . H H12B -.2840 -.4489 .9320 .097(10) Uiso calc R 1 . . H H12C -.3116 -.3729 .8118 .110(11) Uiso calc R 1 . . H O1B 1.03904(19) .2009(3) .5286(2) .1213(10) Uani d . 1 . . O O2B .98429(12) .02978(15) .62390(13) .0550(4) Uani d . 1 . . O O3B .77800(17) -.0363(2) .38418(14) .0741(5) Uani d . 1 . . O O4B .65393(14) -.19692(16) .51145(16) .0633(4) Uani d . 1 . . O O5B .58048(12) -.03305(16) .60652(13) .0559(4) Uani d . 1 . . O O6B .79973(15) .13743(16) .62463(17) .0691(5) Uani d . 1 . . O C1B .9217(3) .1760(3) .4760(3) .0867(10) Uani d . 1 . . C H1B1 .9186 .1431 .3960 .154(18) Uiso calc R 1 . . H H1B2 .8714 .2520 .4714 .159(17) Uiso calc R 1 . . H C2B .8765(2) .0775(2) .5551(2) .0544(6) Uani d . 1 . . C C3B .80168(18) -.0306(2) .49145(19) .0495(5) Uani d . 1 . . C C4B .75480(18) -.1258(2) .57086(19) .0498(5) Uani d . 1 . . C H4B .8221 -.1826 .6064 .053(6) Uiso calc R 1 . . H C5B .70194(19) -.0604(2) .66769(19) .0532(5) Uani d . 1 . . C H5B .6986 -.1195 .7334 .054(6) Uiso calc R 1 . . H C6B .7682(2) .0589(3) .7151(2) .0699(7) Uani d . 1 . . C H6B1 .7158 .1064 .7594 .086(9) Uiso calc R 1 . . H H6B2 .8431 .0363 .7703 .079(8) Uiso calc R 1 . . H C7B 1.08397(19) .1177(2) .6197(2) .0570(6) Uani d . 1 . . C C8B 1.1137(4) .1885(3) .7333(3) .0951(10) Uani d . 1 . . C H8B1 1.1788 .2481 .7290 .104(10) Uiso calc R 1 . . H H8B2 1.1402 .1303 .7977 .127(13) Uiso calc R 1 . . H H8B3 1.0415 .2331 .7471 .18(2) Uiso calc R 1 . . H C9B 1.1907(3) .0434(4) .5934(5) .1187(14) Uani d . 1 . . C H9B1 1.1666 -.0011 .5193 .16(2) Uiso calc R 1 . . H H9B2 1.2167 -.0164 .6565 .23(3) Uiso calc R 1 . . H H9B3 1.2579 .0998 .5874 .110(11) Uiso calc R 1 . . H C10B .54155(19) -.1368(2) .5300(2) .0543(5) Uani d . 1 . . C C11B .4696(3) -.0876(3) .4157(2) .0775(8) Uani d . 1 . . C H11D .4008 -.0386 .4317 .126(13) Uiso calc R 1 . . H H11E .4395 -.1575 .3645 .103(11) Uiso calc R 1 . . H H11F .5219 -.0352 .3772 .084(9) Uiso calc R 1 . . H C12B .4701(3) -.2314(3) .5881(3) .0782(8) Uani d . 1 . . C H12D .5196 -.2593 .6619 .098(10) Uiso calc R 1 . . H H12E .4494 -.3027 .5360 .115(12) Uiso calc R 1 . . H H12F .3956 -.1928 .6037 .117(12) Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1A .0412(8) .0605(10) .0885(12) .0045(7) .0067(7) -.0160(9) O2A .0428(7) .0569(9) .0474(7) -.0034(7) .0079(6) -.0096(7) O3A .0645(10) .0472(11) .1264(16) .0071(8) .0285(10) .0280(11) O4A .0452(8) .0711(11) .0742(10) -.0028(8) .0128(7) .0279(9) O5A .0457(8) .0652(10) .0565(9) -.0002(7) .0005(7) .0156(8) O6A .0480(7) .0443(8) .0450(7) .0017(6) .0088(6) .0058(7) C1A .0454(11) .0485(14) .0648(15) -.0005(9) .0119(10) -.0082(11) C2A .0395(10) .0407(11) .0419(10) .0003(8) .0058(8) -.0018(9) C3A .0448(11) .0436(13) .0480(12) .0010(9) .0002(9) .0102(10) C4A .0462(11) .0565(13) .0420(11) .0000(10) .0097(8) .0075(10) C5A .0472(11) .0497(12) .0525(12) .0112(10) .0116(9) .0051(11) C6A .0535(12) .0399(12) .0636(14) .0063(10) .0092(11) .0074(11) C7A .0409(10) .0583(14) .0610(12) -.0038(10) .0087(9) -.0123(12) C8A .0777(18) .0625(17) .089(2) -.0188(15) .0275(16) -.0138(16) C9A .0571(16) .113(3) .0765(17) -.0100(18) -.0065(12) -.014(2) C10A .0412(11) .0673(17) .0798(16) -.0016(11) .0028(11) .0216(14) C11A .107(3) .082(2) .130(3) -.016(2) -.016(2) -.006(2) C12A .0431(15) .150(4) .155(3) .0150(18) .0248(18) .071(3) O1B .0909(15) .140(2) .1132(16) -.0579(14) -.0336(12) .0867(16) O2B .0464(8) .0558(9) .0592(9) -.0068(7) -.0003(6) .0209(8) O3B .0818(11) .0904(13) .0476(10) .0012(10) .0052(8) .0011(9) O4B .0526(9) .0520(9) .0847(11) -.0031(7) .0109(8) -.0208(8) O5B .0463(8) .0555(9) .0646(9) .0041(7) .0069(6) -.0119(8) O6B .0627(10) .0480(9) .0935(13) -.0004(8) .0060(9) -.0108(9) C1B .0776(18) .080(2) .093(2) -.0131(16) -.0088(15) .0458(18) C2B .0512(12) .0502(13) .0574(13) .0008(10) -.0018(10) .0122(11) C3B .0465(11) .0524(12) .0476(12) .0077(10) .0029(9) .0004(11) C4B .0442(11) .0459(12) .0572(13) .0045(10) .0037(9) -.0003(10) C5B .0508(12) .0600(14) .0483(12) .0000(10) .0075(9) -.0015(11) C6B .0583(15) .088(2) .0625(15) -.0054(14) .0078(12) -.0278(15) C7B .0514(12) .0594(14) .0584(13) -.0103(11) .0052(10) .0188(11) C8B .116(3) .081(2) .084(2) -.037(2) .0050(18) .0006(18) C9B .088(2) .106(3) .182(4) -.016(2) .078(3) -.004(3) C10B .0457(11) .0549(14) .0618(13) -.0018(10) .0082(10) -.0101(11) C11B .0696(17) .092(2) .0650(16) -.0001(16) -.0037(13) -.0001(15) C12B .0671(16) .077(2) .091(2) -.0153(15) .0139(14) .0022(17) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1A O1A C7A 108.11(15) C2A O2A C7A 107.94(14) C4A O4A C10A 108.15(16) C10A O5A C5A 107.65(17) C2A O6A C6A 114.21(14) O1A C1A C2A 105.05(17) O1A C1A H1A1 110.7 C2A C1A H1A1 110.7 O1A C1A H1A2 110.7 C2A C1A H1A2 110.7 H1A1 C1A H1A2 108.8 O6A C2A O2A 113.04(15) O6A C2A C1A 107.80(17) O2A C2A C1A 105.07(15) O6A C2A C3A 108.79(15) O2A C2A C3A 105.44(16) C1A C2A C3A 116.81(18) O3A C3A C4A 122.0(2) O3A C3A C2A 121.5(2) C4A C3A C2A 116.49(18) O4A C4A C3A 112.42(19) O4A C4A C5A 103.64(15) C3A C4A C5A 112.73(17) O4A C4A H4A 109.3 C3A C4A H4A 109.3 C5A C4A H4A 109.3 O5A C5A C6A 110.84(17) O5A C5A C4A 100.91(17) C6A C5A C4A 114.90(17) O5A C5A H5A 109.9 C6A C5A H5A 109.9 C4A C5A H5A 109.9 O6A C6A C5A 112.79(18) O6A C6A H6A1 109.0 C5A C6A H6A1 109.0 O6A C6A H6A2 109.0 C5A C6A H6A2 109.0 H6A1 C6A H6A2 107.8 O1A C7A O2A 103.40(16) O1A C7A C9A 108.5(2) O2A C7A C9A 108.48(19) O1A C7A C8A 111.37(18) O2A C7A C8A 110.3(2) C9A C7A C8A 114.2(2) C7A C8A H8A1 109.5 C7A C8A H8A2 109.5 H8A1 C8A H8A2 109.5 C7A C8A H8A3 109.5 H8A1 C8A H8A3 109.5 H8A2 C8A H8A3 109.5 C7A C9A H9A1 109.5 C7A C9A H9A2 109.5 H9A1 C9A H9A2 109.5 C7A C9A H9A3 109.5 H9A1 C9A H9A3 109.5 H9A2 C9A H9A3 109.5 O5A C10A O4A 105.60(17) O5A C10A C11A 108.8(3) O4A C10A C11A 110.2(2) O5A C10A C12A 111.0(2) O4A C10A C12A 107.5(3) C11A C10A C12A 113.5(3) C10A C11A H11A 109.5 C10A C11A H11B 109.5 H11A C11A H11B 109.5 C10A C11A H11C 109.5 H11A C11A H11C 109.5 H11B C11A H11C 109.5 C10A C12A H12A 109.5 C10A C12A H12B 109.5 H12A C12A H12B 109.5 C10A C12A H12C 109.5 H12A C12A H12C 109.5 H12B C12A H12C 109.5 C1B O1B C7B 113.15(19) C2B O2B C7B 108.82(16) C4B O4B C10B 108.47(16) C10B O5B C5B 107.25(16) C2B O6B C6B 113.49(18) O1B C1B C2B 105.1(2) O1B C1B H1B1 110.7 C2B C1B H1B1 110.7 O1B C1B H1B2 110.7 C2B C1B H1B2 110.7 H1B1 C1B H1B2 108.8 O2B C2B O6B 112.50(18) O2B C2B C3B 109.31(18) O6B C2B C3B 106.19(17) O2B C2B C1B 104.19(18) O6B C2B C1B 108.7(2) C3B C2B C1B 116.1(2) O3B C3B C4B 122.9(2) O3B C3B C2B 121.5(2) C4B C3B C2B 115.55(17) O4B C4B C3B 113.19(17) O4B C4B C5B 102.78(16) C3B C4B C5B 110.81(19) O4B C4B H4B 109.9 C3B C4B H4B 109.9 C5B C4B H4B 109.9 O5B C5B C6B 110.9(2) O5B C5B C4B 100.85(16) C6B C5B C4B 114.85(19) O5B C5B H5B 110.0 C6B C5B H5B 110.0 C4B C5B H5B 110.0 O6B C6B C5B 113.31(19) O6B C6B H6B1 108.9 C5B C6B H6B1 108.9 O6B C6B H6B2 108.9 C5B C6B H6B2 108.9 H6B1 C6B H6B2 107.7 O1B C7B O2B 105.32(16) O1B C7B C8B 109.2(3) O2B C7B C8B 110.1(2) O1B C7B C9B 111.8(3) O2B C7B C9B 107.5(2) C8B C7B C9B 112.7(3) C7B C8B H8B1 109.5 C7B C8B H8B2 109.5 H8B1 C8B H8B2 109.5 C7B C8B H8B3 109.5 H8B1 C8B H8B3 109.5 H8B2 C8B H8B3 109.5 C7B C9B H9B1 109.5 C7B C9B H9B2 109.5 H9B1 C9B H9B2 109.5 C7B C9B H9B3 109.5 H9B1 C9B H9B3 109.5 H9B2 C9B H9B3 109.5 O5B C10B O4B 105.09(15) O5B C10B C11B 108.8(2) O4B C10B C11B 111.0(2) O5B C10B C12B 111.5(2) O4B C10B C12B 107.7(2) C11B C10B C12B 112.4(2) C10B C11B H11D 109.5 C10B C11B H11E 109.5 H11D C11B H11E 109.5 C10B C11B H11F 109.5 H11D C11B H11F 109.5 H11E C11B H11F 109.5 C10B C12B H12D 109.5 C10B C12B H12E 109.5 H12D C12B H12E 109.5 C10B C12B H12F 109.5 H12D C12B H12F 109.5 H12E C12B H12F 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1A C1A . 1.400(3) ? O1A C7A . 1.413(3) ? O2A C2A . 1.403(2) ? O2A C7A . 1.441(2) ? O3A C3A . 1.197(3) ? O4A C4A . 1.395(3) ? O4A C10A . 1.439(3) ? O5A C10A . 1.409(3) ? O5A C5A . 1.416(3) ? O6A C2A . 1.403(2) ? O6A C6A . 1.420(2) ? C1A C2A . 1.510(3) ? C1A H1A1 . .9700 ? C1A H1A2 . .9700 ? C2A C3A . 1.512(3) ? C3A C4A . 1.507(3) ? C4A C5A . 1.507(3) ? C4A H4A . .9800 ? C5A C6A . 1.497(3) ? C5A H5A . .9800 ? C6A H6A1 . .9700 ? C6A H6A2 . .9700 ? C7A C9A . 1.488(3) ? C7A C8A . 1.500(4) ? C8A H8A1 . .9600 ? C8A H8A2 . .9600 ? C8A H8A3 . .9600 ? C9A H9A1 . .9600 ? C9A H9A2 . .9600 ? C9A H9A3 . .9600 ? C10A C11A . 1.482(5) ? C10A C12A . 1.496(4) ? C11A H11A . .9600 ? C11A H11B . .9600 ? C11A H11C . .9600 ? C12A H12A . .9600 ? C12A H12B . .9600 ? C12A H12C . .9600 ? O1B C1B . 1.345(3) ? O1B C7B . 1.379(3) ? O2B C2B . 1.389(2) ? O2B C7B . 1.443(3) ? O3B C3B . 1.203(3) ? O4B C4B . 1.406(3) ? O4B C10B . 1.438(3) ? O5B C10B . 1.415(3) ? O5B C5B . 1.418(2) ? O6B C2B . 1.408(3) ? O6B C6B . 1.414(3) ? C1B C2B . 1.517(3) ? C1B H1B1 . .9700 ? C1B H1B2 . .9700 ? C2B C3B . 1.511(3) ? C3B C4B . 1.504(3) ? C4B C5B . 1.504(3) ? C4B H4B . .9800 ? C5B C6B . 1.504(4) ? C5B H5B . .9800 ? C6B H6B1 . .9700 ? C6B H6B2 . .9700 ? C7B C8B . 1.478(4) ? C7B C9B . 1.486(4) ? C8B H8B1 . .9600 ? C8B H8B2 . .9600 ? C8B H8B3 . .9600 ? C9B H9B1 . .9600 ? C9B H9B2 . .9600 ? C9B H9B3 . .9600 ? C10B C11B . 1.487(3) ? C10B C12B . 1.496(3) ? C11B H11D . .9600 ? C11B H11E . .9600 ? C11B H11F . .9600 ? C12B H12D . .9600 ? C12B H12E . .9600 ? C12B H12F . .9600 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C6A H6A1 O2B 1_455 .9710 2.4243 3.382(3) 168.73 yes C8A H8A2 O1A 2_657 .9602 2.5720 3.384(4) 142.42 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C4A O4A C10A O5A -3.2(2) yes C4B O4B C10B O5B -2.9(2) yes O1A C1A C2A O2A 3.4(2) yes O1B C1B C2B O2B -17.3(3) yes O2A C7A O1A C1A 32.5(2) yes O2B C7B O1B C1B .8(3) yes H5A C5A C6A H6A1 -70 yes H5B C5B C6B H6B1 -71 yes H5A C5A C6A H6A2 48 yes H5B C5B C6B H6B2 46 yes loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 5608259 2 PubChem 139064908