#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/07/2200750.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200750 loop_ _publ_author_name 'Flippen-Anderson, Judith L.' 'Axenrod, Theodore' 'Qi, Lida' 'Gilardi, Richard D.' _publ_section_title ; 1,5-Di-tert-butyl-3-hydroxy-7-methylene-1-azonia-5-azacyclooctane iodide ; _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1147 _journal_page_last o1148 _journal_paper_doi 10.1107/S1600536801018190 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C15 H31 I N2 O' _chemical_formula_moiety 'C15 H31 I N2 O' _chemical_formula_sum 'C15 H31 I N2 O' _chemical_formula_weight 382.33 _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 110.3230(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 26.8737(10) _cell_length_b 14.6191(6) _cell_length_c 10.1557(4) _cell_measurement_reflns_used 8072 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 28.2 _cell_measurement_theta_min 2.5 _cell_volume 3741.5(3) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 294(2) _diffrn_detector_area_resol_mean 8.3 _diffrn_measured_fraction_theta_full .996 _diffrn_measured_fraction_theta_max .996 _diffrn_measurement_device_type 'Bruker SMART 1000' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0296 _diffrn_reflns_av_sigmaI/netI .0287 _diffrn_reflns_limit_h_max 32 _diffrn_reflns_limit_h_min -33 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min -18 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 12311 _diffrn_reflns_theta_full 26.37 _diffrn_reflns_theta_max 26.37 _diffrn_reflns_theta_min 1.61 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.709 _exptl_absorpt_correction_T_max .815 _exptl_absorpt_correction_T_min .757 _exptl_absorpt_correction_type integration _exptl_absorpt_process_details '(XPREP; Bruker, 2001)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.357 _exptl_crystal_density_method 'not measured' _exptl_crystal_description 'thick rod' _exptl_crystal_F_000 1568 _exptl_crystal_size_max .48 _exptl_crystal_size_mid .40 _exptl_crystal_size_min .16 _refine_diff_density_max 1.009 _refine_diff_density_min -.697 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.021 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 178 _refine_ls_number_reflns 3821 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.021 _refine_ls_R_factor_all .0590 _refine_ls_R_factor_gt .0440 _refine_ls_shift/su_max .010 _refine_ls_shift/su_mean .001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0613P)^2^+9.4177P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .1170 _reflns_number_gt 3074 _reflns_number_total 3821 _reflns_threshold_expression I>2\s(I) _cod_data_source_file om6066.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2200750 _cod_database_fobs_code 2200750 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol I1 .394873(13) .19912(2) 1.45305(3) .05592(14) Uani d . 1 . . I N1 .34829(13) .3663(2) .8567(3) .0397(7) Uani d . 1 . . N C1A .29039(19) .3848(4) .7784(5) .0632(14) Uani d . 1 . . C C1B .2741(2) .3333(6) .6383(6) .105(3) Uani d . 1 . . C H1BA .2373 .3444 .5864 .157 Uiso calc R 1 . . H H1BB .2797 .2689 .6559 .157 Uiso calc R 1 . . H H1BC .2952 .3543 .5849 .157 Uiso calc R 1 . . H C1C .2790(3) .4871(5) .7506(8) .104(3) Uani d . 1 . . C H1CA .2418 .4960 .7008 .156 Uiso calc R 1 . . H H1CB .2989 .5100 .6953 .156 Uiso calc R 1 . . H H1CC .2893 .5193 .8384 .156 Uiso calc R 1 . . H C1D .2587(2) .3465(6) .8644(6) .0849(19) Uani d . 1 . . C H1DA .2216 .3579 .8163 .127 Uiso calc R 1 . . H H1DB .2698 .3756 .9547 .127 Uiso calc R 1 . . H H1DC .2646 .2818 .8763 .127 Uiso calc R 1 . . H C2 .36913(18) .4069(3) 1.0003(4) .0445(9) Uani d . 1 . . C H2A .3419 .4448 1.0151 .053 Uiso calc R 1 . . H H2B .3994 .4455 1.0082 .053 Uiso calc R 1 . . H C3 .38578(18) .3329(3) 1.1127(4) .0434(9) Uani d . 1 . . C H3A .3544 .2981 1.1111 .052 Uiso calc R 1 . . H O3 .40743(17) .3782(2) 1.2436(3) .0677(11) Uani d . 1 . . O H3 .403(2) .340(5) 1.304(6) .088 Uiso d . 1 . . H C4 .42764(17) .2672(3) 1.0982(4) .0402(9) Uani d . 1 . . C H4A .4602 .3007 1.1111 .048 Uiso calc R 1 . . H H4B .4352 .2211 1.1713 .048 Uiso calc R 1 . . H N5 .40969(14) .2207(2) .9563(3) .0347(7) Uani d . 1 . . N H5 .3788(18) .247(3) .912(5) .042 Uiso d . 1 . . H C5A .40187(18) .1166(3) .9613(4) .0467(10) Uani d . 1 . . C C5B .3601(2) .0995(3) 1.0265(5) .0565(12) Uani d . 1 . . C H5BA .3275 .1279 .9704 .085 Uiso calc R 1 . . H H5BB .3716 .1248 1.1195 .085 Uiso calc R 1 . . H H5BC .3548 .0348 1.0313 .085 Uiso calc R 1 . . H C5C .4536(3) .0716(4) 1.0476(8) .088(2) Uani d . 1 . . C H5CA .4484 .0067 1.0504 .132 Uiso calc R 1 . . H H5CB .4653 .0957 1.1414 .132 Uiso calc R 1 . . H H5CC .4799 .0837 1.0057 .132 Uiso calc R 1 . . H C5D .3810(3) .0810(4) .8107(6) .087(2) Uani d . 1 . . C H5DA .3479 .1102 .7601 .131 Uiso calc R 1 . . H H5DB .3758 .0161 .8114 .131 Uiso calc R 1 . . H H5DC .4063 .0943 .7658 .131 Uiso calc R 1 . . H C6 .44360(18) .2516(3) .8723(5) .0455(10) Uani d . 1 . . C H6A .4804 .2354 .9222 .055 Uiso calc R 1 . . H H6B .4321 .2206 .7822 .055 Uiso calc R 1 . . H C7 .43895(16) .3537(3) .8497(4) .0404(9) Uani d . 1 . . C C7A .4814(2) .4061(3) .8835(5) .0580(12) Uani d . 1 . . C H7AA .4780 .4683 .8628 .070 Uiso calc R 1 . . H H7AB .5149 .3810 .9280 .070 Uiso calc R 1 . . H C8 .38396(17) .3902(3) .7778(4) .0456(10) Uani d . 1 . . C H8A .3855 .4562 .7698 .055 Uiso calc R 1 . . H H8B .3696 .3650 .6837 .055 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 I1 .0625(2) .0625(2) .04158(18) -.00927(15) .01658(14) .00183(13) N1 .0432(19) .0453(19) .0341(16) .0074(15) .0178(14) .0027(14) C1A .044(3) .097(4) .049(2) .018(3) .017(2) .014(3) C1B .052(3) .198(8) .053(3) -.008(4) .004(3) -.016(4) C1C .084(4) .125(6) .108(5) .055(4) .039(4) .060(5) C1D .046(3) .140(6) .073(4) .002(3) .027(3) .008(4) C2 .059(3) .038(2) .041(2) .0076(19) .0224(19) .0014(17) C3 .060(3) .037(2) .0328(18) .0007(19) .0167(19) -.0038(17) O3 .123(3) .0428(19) .0362(16) -.0053(19) .0263(18) -.0096(13) C4 .051(2) .036(2) .0278(17) -.0024(18) .0065(17) .0003(16) N5 .0392(18) .0324(17) .0333(16) .0030(13) .0136(14) -.0005(12) C5A .063(3) .030(2) .052(2) -.0013(18) .026(2) -.0033(18) C5B .078(3) .044(3) .053(2) -.013(2) .030(2) .000(2) C5C .085(4) .045(3) .133(6) .023(3) .035(4) .014(3) C5D .163(7) .054(3) .066(3) -.039(4) .065(4) -.028(3) C6 .050(2) .045(3) .050(2) .0012(19) .027(2) .0018(19) C7 .047(2) .042(2) .0367(19) -.0016(18) .0198(18) .0010(17) C7A .059(3) .057(3) .062(3) -.015(2) .026(2) -.001(2) C8 .052(3) .048(3) .040(2) .0034(19) .0199(19) .0084(18) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C8 109.9(3) C2 N1 C1A 114.4(3) C8 N1 C1A 114.5(3) N1 C1A C1D 108.2(4) N1 C1A C1B 108.1(4) C1D C1A C1B 108.4(5) N1 C1A C1C 112.0(5) C1D C1A C1C 110.4(5) C1B C1A C1C 109.5(5) C1A C1B H1BA 109.5 C1A C1B H1BB 109.5 H1BA C1B H1BB 109.5 C1A C1B H1BC 109.5 H1BA C1B H1BC 109.5 H1BB C1B H1BC 109.5 C1A C1C H1CA 109.5 C1A C1C H1CB 109.5 H1CA C1C H1CB 109.5 C1A C1C H1CC 109.5 H1CA C1C H1CC 109.5 H1CB C1C H1CC 109.5 C1A C1D H1DA 109.5 C1A C1D H1DB 109.5 H1DA C1D H1DB 109.5 C1A C1D H1DC 109.5 H1DA C1D H1DC 109.5 H1DB C1D H1DC 109.5 N1 C2 C3 111.3(3) N1 C2 H2A 109.4 C3 C2 H2A 109.4 N1 C2 H2B 109.4 C3 C2 H2B 109.4 H2A C2 H2B 108.0 O3 C3 C2 106.9(3) O3 C3 C4 108.0(4) C2 C3 C4 114.2(3) O3 C3 H3A 109.2 C2 C3 H3A 109.2 C4 C3 H3A 109.2 C3 O3 H3 105(4) N5 C4 C3 111.9(3) N5 C4 H4A 109.2 C3 C4 H4A 109.2 N5 C4 H4B 109.2 C3 C4 H4B 109.2 H4A C4 H4B 107.9 C4 N5 C6 110.3(3) C4 N5 C5A 114.5(3) C6 N5 C5A 115.4(3) C4 N5 H5 103(3) C6 N5 H5 103(3) C5A N5 H5 110(3) C5B C5A C5C 110.3(4) C5B C5A C5D 108.3(4) C5C C5A C5D 112.0(5) C5B C5A N5 108.1(3) C5C C5A N5 109.9(4) C5D C5A N5 108.1(3) C5A C5B H5BA 109.5 C5A C5B H5BB 109.5 H5BA C5B H5BB 109.5 C5A C5B H5BC 109.5 H5BA C5B H5BC 109.5 H5BB C5B H5BC 109.5 C5A C5C H5CA 109.5 C5A C5C H5CB 109.5 H5CA C5C H5CB 109.5 C5A C5C H5CC 109.5 H5CA C5C H5CC 109.5 H5CB C5C H5CC 109.5 C5A C5D H5DA 109.5 C5A C5D H5DB 109.5 H5DA C5D H5DB 109.5 C5A C5D H5DC 109.5 H5DA C5D H5DC 109.5 H5DB C5D H5DC 109.5 C7 C6 N5 110.2(3) C7 C6 H6A 109.6 N5 C6 H6A 109.6 C7 C6 H6B 109.6 N5 C6 H6B 109.6 H6A C6 H6B 108.1 C7A C7 C8 122.5(4) C7A C7 C6 121.1(4) C8 C7 C6 116.2(4) C7 C7A H7AA 120.0 C7 C7A H7AB 120.0 H7AA C7A H7AB 120.0 N1 C8 C7 111.3(3) N1 C8 H8A 109.4 C7 C8 H8A 109.4 N1 C8 H8B 109.4 C7 C8 H8B 109.4 H8A C8 H8B 108.0 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.491(5) ? N1 C8 . 1.489(5) ? N1 C1A . 1.506(6) ? C1A C1D . 1.523(7) ? C1A C1B . 1.533(8) ? C1A C1C . 1.533(9) ? C1B H1BA . .9600 ? C1B H1BB . .9600 ? C1B H1BC . .9600 ? C1C H1CA . .9600 ? C1C H1CB . .9600 ? C1C H1CC . .9600 ? C1D H1DA . .9600 ? C1D H1DB . .9600 ? C1D H1DC . .9600 ? C2 C3 . 1.522(6) ? C2 H2A . .9700 ? C2 H2B . .9700 ? C3 O3 . 1.416(5) ? C3 C4 . 1.525(6) ? C3 H3A . .9800 ? O3 H3 . .87(7) ? C4 N5 . 1.513(5) ? C4 H4A . .9700 ? C4 H4B . .9700 ? N5 C6 . 1.517(5) ? N5 C5A . 1.539(5) ? N5 H5 . .89(5) ? C5A C5B . 1.508(6) ? C5A C5C . 1.513(7) ? C5A C5D . 1.526(6) ? C5B H5BA . .9600 ? C5B H5BB . .9600 ? C5B H5BC . .9600 ? C5C H5CA . .9600 ? C5C H5CB . .9600 ? C5C H5CC . .9600 ? C5D H5DA . .9600 ? C5D H5DB . .9600 ? C5D H5DC . .9600 ? C6 C7 . 1.509(6) ? C6 H6A . .9700 ? C6 H6B . .9700 ? C7 C7A . 1.318(6) ? C7 C8 . 1.500(6) ? C7A H7AA . .9300 ? C7A H7AB . .9300 ? C8 H8A . .9700 ? C8 H8B . .9700 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N5 H5 N1 .89(5) 1.92(5) 2.668(5) 141(4) O3 H3 I1 .87(7) 2.61(7) 3.462(4) 167(6) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139065050