#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/09/2200917.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200917 loop_ _publ_author_name 'Odoko, Mamiko' 'Adachi, Yukari' 'Okabe, Nobuo' _publ_section_title ; Bis[2-hydroxy-3-(1H-imidazol-4-yl)propionato]nickel(II) ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m7 _journal_page_last m9 _journal_volume 58 _journal_year 2002 _chemical_formula_iupac '[Ni (C6 H7 N2 O3)2]' _chemical_formula_moiety 'C12 H14 N4 Ni O6' _chemical_formula_sum 'C12 H14 N4 Ni O6' _chemical_formula_weight 368.96 _space_group_IT_number 18 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2 2ab' _symmetry_space_group_name_H-M 'P 21 21 2' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 2 _cell_length_a 10.631(3) _cell_length_b 13.283(3) _cell_length_c 5.214(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296.2 _cell_measurement_theta_max 25.0 _cell_measurement_theta_min 24.7 _cell_volume 736.3(5) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ;MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1992) ; _computing_data_reduction 'TEXSAN (Molecular Structure Corporation & Rigaku, 1999)' _computing_molecular_graphics 'ORTEP (Johnson, 1976)' _computing_publication_material TEXSAN _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR97 (Altomare et al., 1999)' _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Rigaku AFC-5R' _diffrn_measurement_method \w-2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .7107 _diffrn_reflns_av_R_equivalents .000 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 6 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 1018 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_standards_decay_% .46 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.355 _exptl_absorpt_correction_T_max .666 _exptl_absorpt_correction_T_min .621 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour light_blue _exptl_crystal_density_diffrn 1.664 _exptl_crystal_density_method 'not measured' _exptl_crystal_description pillar _exptl_crystal_F_000 380.0 _exptl_crystal_size_max .500 _exptl_crystal_size_mid .300 _exptl_crystal_size_min .300 _refine_diff_density_max .32 _refine_diff_density_min -.31 _refine_ls_abs_structure_details 'Flack (1983), 1016 Friedel pairs' _refine_ls_abs_structure_Flack -.03(3) _refine_ls_extinction_coef .0230 _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.095 _refine_ls_hydrogen_treatment noref _refine_ls_number_parameters 106 _refine_ls_number_reflns 1018 _refine_ls_R_factor_gt .0194 _refine_ls_shift/su_max .0000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0370P)^2^+0.1736P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .0573 _reflns_number_gt 991 _reflns_number_total 1018 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file na6112.cif _[local]_cod_data_source_block I _cod_original_cell_volume 736.3(4) _cod_database_code 2200917 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,z 1/2+x,1/2-y,-z 1/2-x,1/2+y,-z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Ni1 .5000 .5000 .24618(6) .01720(10) Uani d S 1.00 . . Ni O1 .14670(10) .52990(10) -.0244(3) .0304(4) Uani d . 1.00 . . O O2 .34800(10) .4851(2) -.0009(3) .0230(5) Uani d . 1.00 . . O O3 .3492(2) .4831(2) .4923(3) .0224(5) Uani d . 1.00 . . O N1 .4786(2) .81260(10) .1327(4) .0352(5) Uani d . 1.00 . . N N3 .4655(2) .65310(10) .2406(4) .0241(3) Uani d . 1.00 . . N C2 .5369(2) .7229(2) .1337(5) .0302(5) Uani d . 1.00 . . C C4 .3546(2) .70100(10) .3110(4) .0242(4) Uani d . 1.00 . . C C5 .3630(2) .79980(10) .2441(6) .0324(4) Uani d . 1.00 . . C C6 .2495(2) .6477(2) .4439(4) .0271(4) Uani d . 1.00 . . C C7 .2436(2) .5347(2) .3873(4) .0214(4) Uani d . 1.00 . . C C8 .2440(2) .51530(10) .0974(4) .0199(4) Uani d . 1.00 . . C H1 .5056 .8719 .0817 .0332 Uiso calc . 1.00 . . H H2 .6190 .7132 .0621 .0332 Uiso calc . 1.00 . . H H3 .2991 .8565 .2722 .0332 Uiso calc . 1.00 . . H H4 .2550 .6521 .6163 .0332 Uiso calc . 1.00 . . H H5 .1724 .6830 .3980 .0332 Uiso calc . 1.00 . . H H6 .1621 .5118 .4525 .0332 Uiso calc . 1.00 . . H H7 .3586 .4886 .6334 .0332 Uiso calc . 1.00 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 .0180(2) .0183(2) .0154(2) .00250(10) .0000 .0000 O1 .0234(7) .0363(8) .0317(8) .0064(6) -.0050(7) .0005(7) O2 .0204(6) .0330(10) .0160(6) .0053(8) -.0010(6) -.0007(7) O3 .0244(6) .0270(10) .0155(6) .0033(8) .0013(6) .0038(6) N1 .0370(10) .0201(8) .0480(10) -.0048(7) -.0001(10) .0051(8) N3 .0244(7) .0193(7) .0287(8) .0016(6) .0015(8) .0010(8) C2 .0270(9) .0249(10) .0390(10) -.0014(8) .0010(10) .0036(10) C4 .0273(9) .0203(9) .0250(10) .0022(8) .0003(8) -.0021(8) C5 .0350(10) .0203(8) .0420(10) .0032(7) .0010(10) -.0010(10) C6 .0295(9) .0263(9) .0260(10) .0071(9) .0083(9) -.0033(8) C7 .0196(8) .0241(9) .0204(9) .0009(8) .0041(8) .0026(7) C8 .0238(9) .0169(10) .0191(8) .0004(8) .0004(8) .0028(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag NI1 O2 . . 2.076(2) yes NI1 O3 . . 2.066(2) yes NI1 N3 . . 2.067(2) yes O1 C8 . . 1.229(3) yes O2 C8 . . 1.283(3) yes O3 C7 . . 1.425(3) yes O3 H7 . . .746 no N1 C2 . . 1.343(3) yes N1 C5 . . 1.369(3) yes N1 H1 . . .880 no N3 C2 . . 1.322(3) yes N3 C4 . . 1.388(3) yes C2 H2 . . .957 no C4 C5 . . 1.361(3) yes C4 C6 . . 1.493(3) yes C5 H3 . . 1.025 no C6 C7 . . 1.531(3) yes C6 H4 . . .903 no C6 H5 . . .974 no C7 C8 . . 1.533(3) yes C7 H6 . . .980 no loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .003 .002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.4) ; H H .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.4) ; N N .006 .003 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.4) ; O O .011 .006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.4) ; Ni Ni .339 1.112 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.4) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O2 NI1 O2 1_555 2_665 103.28(8) no O2 NI1 O3 1_555 1_555 76.78(6) yes O2 NI1 O3 1_555 2_665 179.22(10) no O2 NI1 N3 1_555 1_555 86.96(8) yes O2 NI1 N3 1_555 2_665 92.04(9) no O2 NI1 O3 2_665 1_555 76.77(6) no O2 NI1 O3 2_665 2_665 179.22(10) no O2 NI1 N3 2_665 1_555 86.96(9) no O2 NI1 N3 2_665 2_665 92.04(9) no O3 NI1 O3 1_555 2_665 103.17(9) no O3 NI1 N3 1_555 1_555 88.71(7) yes O3 NI1 N3 1_555 2_665 92.29(7) no O3 NI1 N3 2_665 1_555 88.74(9) no O3 NI1 N3 2_665 2_665 92.27(9) no N3 NI1 N3 1_555 2_665 178.40(10) no NI1 O2 C8 1_555 1_555 113.20(10) yes NI1 O3 C7 1_555 1_555 108.70(10) yes NI1 O3 H7 1_555 1_555 119.9 no C7 O3 H7 1_555 1_555 115.9 no C2 N1 C5 1_555 1_555 107.6(2) yes C2 N1 H1 1_555 1_555 130.2 no C5 N1 H1 1_555 1_555 122.2 no NI1 N3 C2 1_555 1_555 126.40(10) yes NI1 N3 C4 1_555 1_555 126.70(10) yes C2 N3 C4 1_555 1_555 106.1(2) yes N1 C2 N3 1_555 1_555 111.0(2) yes N1 C2 H2 1_555 1_555 122.6 no N3 C2 H2 1_555 1_555 126.4 no N3 C4 C5 1_555 1_555 108.6(2) yes N3 C4 C6 1_555 1_555 122.8(2) yes C5 C4 C6 1_555 1_555 128.7(2) yes N1 C5 C4 1_555 1_555 106.7(2) yes N1 C5 H3 1_555 1_555 124.3 no C4 C5 H3 1_555 1_555 128.9 no C4 C6 C7 1_555 1_555 113.9(2) yes C4 C6 H4 1_555 1_555 112.6 no C4 C6 H5 1_555 1_555 106.7 no C7 C6 H4 1_555 1_555 104.9 no C7 C6 H5 1_555 1_555 113.0 no H4 C6 H5 1_555 1_555 105.6 no O3 C7 C6 1_555 1_555 111.4(2) yes O3 C7 C8 1_555 1_555 107.2(2) yes O3 C7 H6 1_555 1_555 114.4 no C6 C7 C8 1_555 1_555 110.8(2) yes C6 C7 H6 1_555 1_555 106.0 no C8 C7 H6 1_555 1_555 107.0 no O1 C8 O2 1_555 1_555 124.6(2) yes O1 C8 C7 1_555 1_555 118.7(2) yes O2 C8 C7 1_555 1_555 116.6(2) yes N1 H1 N1 1_555 2_675 152.5 no N1 H1 O3 1_555 4_556 82.8 no N1 H1 O3 1_555 3_566 118.6 no N1 H1 O3 2_675 4_556 61.92 no N1 H1 O3 2_675 3_566 71.54 no N1 H2 O3 1_555 2_665 116.5 no N1 H2 O3 1_555 2_664 128.8 no N1 H2 N1 1_555 3_565 144.3 no N1 H2 O3 1_555 1_555 83.6 no O3 H2 O3 2_665 2_664 89.0 no O3 H2 N1 2_665 3_565 70.89 no O3 H2 N1 2_664 3_565 54.14 no O3 H2 O3 2_664 1_555 89.0 no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 O1 N1 2.810(2) 3_465 O1 O1 3.219(3) 2_565 O1 N1 3.228(2) 4_545 O1 C7 3.237(3) 1_554 O1 C5 3.266(3) 4_545 O1 C6 3.367(3) 1_554 O1 O3 3.372(2) 1_554 O1 C2 3.531(3) 3_465 O2 O3 2.643(2) 1_554 O2 C7 3.442(3) 1_554 O2 C5 3.564(3) 4_545 O3 C8 3.375(2) 1_556 O3 C5 3.594(3) 4_546 C2 C6 3.593(3) 3_566 C5 C8 3.558(3) 4_555 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O1 3_565 .88 2.01 2.808(3) 150 yes O3 H7 O2 1_556 .75 1.91 2.642(2) 167 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag NI1 O2 C8 O1 1_555 1_555 1_555 1_555 167.0(2) no NI1 O2 C8 C7 1_555 1_555 1_555 1_555 -12.6(2) no NI1 O2 C8 O1 1_555 2_665 2_665 2_665 167.0(2) no NI1 O2 C8 C7 1_555 2_665 2_665 2_665 -12.6(2) no NI1 O3 C7 C6 1_555 1_555 1_555 1_555 -81.2(2) no NI1 O3 C7 C8 1_555 1_555 1_555 1_555 40.2(2) no NI1 O3 C7 C6 1_555 2_665 2_665 2_665 -81.2(2) no NI1 O3 C7 C8 1_555 2_665 2_665 2_665 40.2(2) no NI1 N3 C2 N1 1_555 1_555 1_555 1_555 171.1(2) no NI1 N3 C4 C5 1_555 1_555 1_555 1_555 -171.0(2) no NI1 N3 C4 C6 1_555 1_555 1_555 1_555 10.5(3) no NI1 N3 C2 N1 1_555 2_665 2_665 2_665 171.1(2) no NI1 N3 C4 C5 1_555 2_665 2_665 2_665 -171.0(2) no NI1 N3 C4 C6 1_555 2_665 2_665 2_665 10.5(3) no O1 C8 C7 O3 1_555 1_555 1_555 1_555 161.7(2) no O1 C8 C7 C6 1_555 1_555 1_555 1_555 -76.5(2) no O2 NI1 O2 C8 1_555 1_555 2_665 2_665 -153.1(2) no O2 NI1 O3 C7 1_555 1_555 1_555 1_555 -37.40(10) no O2 NI1 N3 C2 1_555 1_555 1_555 1_555 -110.7(2) no O2 NI1 N3 C4 1_555 1_555 1_555 1_555 58.3(2) no O2 NI1 N3 C2 1_555 1_555 2_665 2_665 -7.5(2) no O2 NI1 N3 C4 1_555 1_555 2_665 2_665 161.5(2) no O2 C8 C7 O3 1_555 1_555 1_555 1_555 -18.7(3) no O2 C8 C7 C6 1_555 1_555 1_555 1_555 103.1(2) no O3 NI1 O2 C8 1_555 1_555 1_555 1_555 27.6(2) no O3 NI1 O3 C7 1_555 1_555 2_665 2_665 141.8(2) no O3 NI1 N3 C2 1_555 1_555 1_555 1_555 172.5(2) no O3 NI1 N3 C4 1_555 1_555 1_555 1_555 -18.6(2) no O3 NI1 N3 C2 1_555 1_555 2_665 2_665 69.3(2) no O3 NI1 N3 C4 1_555 1_555 2_665 2_665 -121.7(2) no O3 C7 C6 C4 1_555 1_555 1_555 1_555 67.1(2) no N1 C2 N3 C4 1_555 1_555 1_555 1_555 .3(3) no N1 C5 C4 N3 1_555 1_555 1_555 1_555 .1(3) no N1 C5 C4 C6 1_555 1_555 1_555 1_555 178.5(2) no N3 NI1 O2 C8 1_555 1_555 1_555 1_555 -61.8(2) no N3 NI1 O2 C8 1_555 1_555 2_665 2_665 119.5(2) no N3 NI1 O3 C7 1_555 1_555 1_555 1_555 49.80(10) no N3 NI1 O3 C7 1_555 1_555 2_665 2_665 -129.00(10) no N3 C2 N1 C5 1_555 1_555 1_555 1_555 -.3(3) no N3 C4 C6 C7 1_555 1_555 1_555 1_555 -27.1(3) no C2 N1 C5 C4 1_555 1_555 1_555 1_555 .1(3) no C2 N3 C4 C5 1_555 1_555 1_555 1_555 -.2(3) no C2 N3 C4 C6 1_555 1_555 1_555 1_555 -178.8(2) no C4 C6 C7 C8 1_555 1_555 1_555 1_555 -52.2(2) no C5 C4 C6 C7 1_555 1_555 1_555 1_555 154.7(2) no _cod_database_fobs_code 2200917 _journal_paper_doi 10.1107/S1600536801020335