#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2200922.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200922 loop_ _publ_author_name 'Coles, Simon J.' 'Hursthouse, Michael B.' 'K\?il\?i\,c, Adem' '\,Cift\,ci, G\"on\"ul Yenilmez' _publ_section_title ; 2-Aminomethyl-15-crown[5] hydrochloride dihydrate ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o83 _journal_page_last o85 _journal_volume 58 _journal_year 2002 _chemical_formula_iupac 'C11 H24 N O5 1+, Cl 1-, 2H2 O1' _chemical_formula_moiety 'C11 H24 N O5 1+, Cl 1-, 2H2 O1' _chemical_formula_sum 'C11 H28 Cl N O7' _chemical_formula_weight 321.79 _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 109.3280(10) _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 21.4218(4) _cell_length_b 7.8864(2) _cell_length_c 19.7794(4) _cell_measurement_reflns_used 11239 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 2.91 _cell_volume 3153.22(12) _computing_cell_refinement 'DENZO and COLLECT' _computing_data_collection 'DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998)' _computing_data_reduction 'DENZO and COLLECT' _computing_molecular_graphics 'PLATON (Spek, 1990)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_measured_fraction_theta_full .992 _diffrn_measured_fraction_theta_max .992 _diffrn_measurement_device 'Nonius KappaCCD' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0513 _diffrn_reflns_limit_h_max 25 _diffrn_reflns_limit_h_min -27 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 25 _diffrn_reflns_limit_l_min -25 _diffrn_reflns_number 14261 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.1 _exptl_absorpt_coefficient_mu .271 _exptl_absorpt_correction_T_max .9892 _exptl_absorpt_correction_T_min .9378 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(Blessing, 1997)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.356 _exptl_crystal_density_method 'not measured' _exptl_crystal_description rod _exptl_crystal_F_000 1392 _exptl_crystal_size_max .24 _exptl_crystal_size_mid .1 _exptl_crystal_size_min .04 _refine_diff_density_max .271 _refine_diff_density_min -.314 _refine_ls_extinction_coef .0021(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.036 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 199 _refine_ls_number_reflns 3595 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.036 _refine_ls_R_factor_gt .0344 _refine_ls_shift/su_max .003 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0345P)^2^+1.8513P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .0869 _reflns_number_gt 3010 _reflns_number_total 3595 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file na6117.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2200922 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol C1 .30886(6) .17509(16) .09757(7) .0173(3) Uani d . 1 C H1A .3435 .1147 .1359 .021 Uiso calc R 1 H H1B .3038 .1173 .0516 .021 Uiso calc R 1 H C2 .24415(6) .16587(16) .11262(7) .0170(3) Uani d . 1 C H2 .2513 .2096 .1621 .02 Uiso calc R 1 H C3 .14096(7) .31623(18) .08214(7) .0223(3) Uani d . 1 C H3A .139 .4408 .0873 .027 Uiso calc R 1 H H3B .1457 .2645 .1292 .027 Uiso calc R 1 H C4 .07758(7) .25573(18) .02785(8) .0247(3) Uani d . 1 C H4A .0807 .1329 .0191 .03 Uiso calc R 1 H H4B .0404 .2735 .0463 .03 Uiso calc R 1 H C5 -.00063(7) .3317(2) -.08588(9) .0326(4) Uani d . 1 C H5A -.0249 .4389 -.0866 .039 Uiso calc R 1 H H5B -.0239 .2397 -.0699 .039 Uiso calc R 1 H C6 .00088(7) .29333(18) -.15974(8) .0268(3) Uani d . 1 C H6A -.045 .2875 -.1936 .032 Uiso calc R 1 H H6B .024 .3862 -.1755 .032 Uiso calc R 1 H C7 -.00547(7) -.01042(18) -.16194(7) .0226(3) Uani d . 1 C H7A -.0393 -.025 -.2098 .027 Uiso calc R 1 H H7B -.0283 .0016 -.1261 .027 Uiso calc R 1 H C8 .03988(7) -.16048(17) -.14426(7) .0222(3) Uani d . 1 C H8A .014 -.2666 -.1498 .027 Uiso calc R 1 H H8B .0665 -.1652 -.1767 .027 Uiso calc R 1 H C9 .13480(7) -.26121(16) -.05208(7) .0199(3) Uani d . 1 C H9A .1639 -.2439 -.0814 .024 Uiso calc R 1 H H9B .1169 -.378 -.0603 .024 Uiso calc R 1 H C10 .17320(7) -.23633(16) .02545(7) .0199(3) Uani d . 1 C H10A .1431 -.2439 .054 .024 Uiso calc R 1 H H10B .207 -.3266 .0419 .024 Uiso calc R 1 H C11 .21955(7) -.01537(16) .10792(7) .0187(3) Uani d . 1 C H11A .2539 -.0883 .1409 .022 Uiso calc R 1 H H11B .1793 -.0208 .122 .022 Uiso calc R 1 H N1 .33014(5) .35389(13) .09364(6) .0170(2) Uani d . 1 N H1C .31 .395 .0487 .025 Uiso calc R 1 H H1D .3748 .3574 .104 .025 Uiso calc R 1 H H1E .3186 .4183 .1258 .025 Uiso calc R 1 H O1 .19772(4) .27369(11) .06217(5) .0180(2) Uani d . 1 O O2 .06582(5) .34680(13) -.03706(5) .0270(2) Uani d . 1 O O3 .03378(4) .13671(12) -.16135(5) .0205(2) Uani d . 1 O O4 .08209(4) -.14146(11) -.07181(5) .0199(2) Uani d . 1 O O5 .20482(4) -.07377(11) .03598(5) .0179(2) Uani d . 1 O O6 .16461(5) .68622(15) .20050(6) .0262(2) Uani d . 1 O O7 .39466(6) .91279(16) .24963(7) .0366(3) Uani d . 1 O Cl1 .310005(16) .55870(4) .222423(17) .02295(12) Uani d . 1 Cl H04 .3718(10) .995(3) .2649(10) .048(5) Uiso d . 1 H H02 .1684(10) .783(3) .2185(10) .042(5) Uiso d . 1 H H03 .3697(11) .820(3) .2448(11) .055(6) Uiso d . 1 H H01 .2037(12) .654(3) .2054(11) .054(6) Uiso d . 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 .0195(6) .0152(6) .0176(6) -.0013(5) .0065(5) .0006(5) C2 .0194(6) .0187(6) .0127(6) -.0012(5) .0050(5) .0006(5) C3 .0266(7) .0220(7) .0238(7) .0027(6) .0158(6) -.0001(5) C4 .0226(7) .0192(7) .0382(8) -.0005(5) .0181(6) -.0013(6) C5 .0158(7) .0351(9) .0446(9) .0029(6) .0070(6) -.0132(7) C6 .0200(7) .0219(7) .0328(8) .0061(6) .0010(6) .0024(6) C7 .0171(7) .0238(7) .0252(7) -.0037(6) .0049(5) -.0029(5) C8 .0227(7) .0209(7) .0205(7) -.0034(5) .0038(6) -.0046(5) C9 .0196(7) .0139(6) .0264(7) .0001(5) .0079(6) -.0021(5) C10 .0212(7) .0138(6) .0245(7) -.0022(5) .0073(6) .0013(5) C11 .0206(6) .0203(7) .0149(6) -.0029(5) .0056(5) .0013(5) N1 .0155(5) .0175(6) .0183(6) -.0019(4) .0063(4) -.0007(4) O1 .0180(5) .0199(5) .0184(5) .0026(4) .0092(4) .0030(3) O2 .0189(5) .0344(6) .0272(5) -.0060(4) .0071(4) -.0029(4) O3 .0167(5) .0190(5) .0247(5) .0004(4) .0053(4) .0004(4) O4 .0198(5) .0183(5) .0195(5) .0026(4) .0037(4) -.0028(4) O5 .0226(5) .0158(5) .0158(4) -.0054(4) .0070(4) -.0011(3) O6 .0243(6) .0243(6) .0300(6) -.0018(5) .0092(4) .0008(4) O7 .0340(6) .0276(6) .0546(8) -.0042(5) .0233(6) -.0107(5) Cl1 .0254(2) .02148(19) .02452(19) -.00101(13) .01164(15) -.00376(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .006 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl .1484 .1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N1 C1 C2 111.80(10) ? N1 C1 H1A 109.3 ? C2 C1 H1A 109.3 ? N1 C1 H1B 109.3 ? C2 C1 H1B 109.3 ? H1A C1 H1B 107.9 ? O1 C2 C1 107.74(9) ? O1 C2 C11 111.72(10) ? C1 C2 C11 110.85(11) ? O1 C2 H2 108.8 ? C1 C2 H2 108.8 ? C11 C2 H2 108.8 ? O1 C3 C4 112.09(11) ? O1 C3 H3A 109.2 ? C4 C3 H3A 109.2 ? O1 C3 H3B 109.2 ? C4 C3 H3B 109.2 ? H3A C3 H3B 107.9 ? O2 C4 C3 109.49(11) ? O2 C4 H4A 109.8 ? C3 C4 H4A 109.8 ? O2 C4 H4B 109.8 ? C3 C4 H4B 109.8 ? H4A C4 H4B 108.2 ? O2 C5 C6 109.57(11) ? O2 C5 H5A 109.8 ? C6 C5 H5A 109.8 ? O2 C5 H5B 109.8 ? C6 C5 H5B 109.8 ? H5A C5 H5B 108.2 ? O3 C6 C5 111.45(12) ? O3 C6 H6A 109.3 ? C5 C6 H6A 109.3 ? O3 C6 H6B 109.3 ? C5 C6 H6B 109.3 ? H6A C6 H6B 108 ? O3 C7 C8 107.77(11) ? O3 C7 H7A 110.2 ? C8 C7 H7A 110.2 ? O3 C7 H7B 110.2 ? C8 C7 H7B 110.2 ? H7A C7 H7B 108.5 ? O4 C8 C7 107.34(10) ? O4 C8 H8A 110.2 ? C7 C8 H8A 110.2 ? O4 C8 H8B 110.2 ? C7 C8 H8B 110.2 ? H8A C8 H8B 108.5 ? O4 C9 C10 108.15(10) ? O4 C9 H9A 110.1 ? C10 C9 H9A 110.1 ? O4 C9 H9B 110.1 ? C10 C9 H9B 110.1 ? H9A C9 H9B 108.4 ? O5 C10 C9 109.88(10) ? O5 C10 H10A 109.7 ? C9 C10 H10A 109.7 ? O5 C10 H10B 109.7 ? C9 C10 H10B 109.7 ? H10A C10 H10B 108.2 ? O5 C11 C2 108.84(10) ? O5 C11 H11A 109.9 ? C2 C11 H11A 109.9 ? O5 C11 H11B 109.9 ? C2 C11 H11B 109.9 ? H11A C11 H11B 108.3 ? C1 N1 H1C 109.5 ? C1 N1 H1D 109.5 ? H1C N1 H1D 109.5 ? C1 N1 H1E 109.5 ? H1C N1 H1E 109.5 ? H1D N1 H1E 109.5 ? C2 O1 C3 113.76(9) yes C4 O2 C5 113.96(11) yes C6 O3 C7 114.13(10) yes C9 O4 C8 112.77(10) yes C11 O5 C10 111.80(9) yes H02 O6 H01 105.9(19) ? H04 O7 H03 104.2(18) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 N1 1.4919(16) yes C1 C2 1.5128(17) ? C1 H1A .99 ? C1 H1B .99 ? C2 O1 1.4321(15) yes C2 C11 1.5156(18) ? C2 H2 1 ? C3 O1 1.4369(15) yes C3 C4 1.503(2) ? C3 H3A .99 ? C3 H3B .99 ? C4 O2 1.4189(17) yes C4 H4A .99 ? C4 H4B .99 ? C5 O2 1.4363(18) y C5 C6 1.503(2) ? C5 H5A .99 ? C5 H5B .99 ? C6 O3 1.4276(16) yes C6 H6A .99 ? C6 H6B .99 ? C7 O3 1.4306(16) yes C7 C8 1.497(2) ? C7 H7A .99 ? C7 H7B .99 ? C8 O4 1.4269(16) yes C8 H8A .99 ? C8 H8B .99 ? C9 O4 1.4239(16) yes C9 C10 1.4939(19) ? C9 H9A .99 ? C9 H9B .99 ? C10 O5 1.4326(15) yes C10 H10A .99 ? C10 H10B .99 ? C11 O5 1.4279(15) yes C11 H11A .99 ? C11 H11B .99 ? N1 H1C .91 ? N1 H1D .91 ? N1 H1E .91 ? O6 H02 .84(2) ? O6 H01 .85(2) ? O7 H04 .92(2) ? O7 H03 .89(2) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O6 H01 Cl1 . .85(2) 2.31(2) 3.1633(12) 178(2) yes O6 H02 Cl1 4_555 .84(2) 2.44(2) 3.2711(12) 174.7(18) yes N1 H1C O1 7_555 .91 2.52 3.1063(14) 122 yes N1 H1C O5 7_555 .91 2.13 2.9783(13) 154 yes N1 H1D O3 7_555 .91 1.91 2.7772(14) 158 yes N1 H1D O4 7_555 .91 2.58 3.0662(14) 114 yes N1 H1E Cl1 . .91 2.27 3.1640(11) 168 yes O7 H03 Cl1 . .89(2) 2.39(2) 3.2757(13) 172.9(18) yes O7 H04 O6 4_555 .92(2) 1.93(2) 2.8397(16) 171.6(18) yes C1 H1B O1 7_555 .99 2.40 3.1418(16) 131 yes C9 H9B O2 1_545 .99 2.54 3.4810(19) 159 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion N1 C1 C2 O1 50.97(13) N1 C1 C2 C11 173.49(10) O1 C3 C4 O2 -66.88(14) O2 C5 C6 O3 61.19(16) O3 C7 C8 O4 66.68(13) O4 C9 C10 O5 -65.84(13) O1 C2 C11 O5 55.69(13) C1 C2 C11 O5 -64.49(13) C1 C2 O1 C3 -163.06(10) C11 C2 O1 C3 74.96(13) C4 C3 O1 C2 -119.12(12) C3 C4 O2 C5 -164.72(11) C6 C5 O2 C4 -132.98(13) C5 C6 O3 C7 77.79(14) C8 C7 O3 C6 -165.35(11) C10 C9 O4 C8 -176.75(10) C7 C8 O4 C9 -170.19(10) C2 C11 O5 C10 -172.40(10) C9 C10 O5 C11 157.03(10)