#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2202123.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202123 loop_ _publ_author_name 'Hamzah, Ahmad Sazali' 'Shaameri, Zurina' 'Adziz, Izwan A.' 'Yamin, Bohari M.' _publ_section_title ; Methyl (3SR,4RS)-3-benzyl-4-hydroxy-2-oxopyrrolidine-3-carboxylate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o737 _journal_page_last o738 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac 'C13 H15 N O4' _chemical_formula_moiety 'C13 H15 N O4' _chemical_formula_sum 'C13 H15 N O4' _chemical_formula_weight 249.26 _chemical_name_systematic ; Methyl (3SR,4RS)-3-benzyl-4-hydroxy-2-oxopyrrolidine-3-carboxylate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 14.7891(11) _cell_length_b 10.8965(8) _cell_length_c 15.4391(11) _cell_measurement_reflns_used 5914 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.5 _cell_measurement_theta_min 2.6 _cell_volume 2488.0(3) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 83.66 _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device_type ; Bruker SMART APEX CCD area-detector ; _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0185 _diffrn_reflns_av_sigmaI/netI 0.0195 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -19 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 19 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 15920 _diffrn_reflns_theta_full 27.5 _diffrn_reflns_theta_max 27.52 _diffrn_reflns_theta_min 2.64 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.099 _exptl_absorpt_correction_type none _exptl_crystal_colour Colourless _exptl_crystal_density_diffrn 1.331 _exptl_crystal_density_method 'not measured' _exptl_crystal_description slab _exptl_crystal_F_000 1056 _exptl_crystal_size_max 0.48 _exptl_crystal_size_mid 0.36 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.33 _refine_diff_density_min -0.17 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.058 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 163 _refine_ls_number_reflns 2859 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.058 _refine_ls_R_factor_all 0.0485 _refine_ls_R_factor_gt 0.0426 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0755P)^2^+0.3864P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1218 _refine_ls_wR_factor_ref 0.1280 _reflns_number_gt 2429 _reflns_number_total 2859 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ob6226.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2202123 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.18617(7) 0.65338(9) 0.24409(7) 0.0395(2) Uani d . 1 N H1A 0.2400 0.6340 0.2602 0.047 Uiso calc R 1 H O1 0.02326(7) 0.84984(8) 0.15162(7) 0.0537(3) Uani d . 1 O H1B -0.0204 0.8873 0.1710 0.080 Uiso calc R 1 H O2 0.12050(6) 0.46970(8) 0.27650(6) 0.0447(2) Uani d . 1 O O3 -0.02458(7) 0.63882(9) 0.36018(6) 0.0541(3) Uani d . 1 O O4 -0.12282(6) 0.59980(14) 0.25449(8) 0.0682(3) Uani d . 1 O C1 0.06201(8) 0.77869(10) 0.21727(8) 0.0384(3) Uani d . 1 C H1C 0.0475 0.8154 0.2735 0.046 Uiso calc R 1 H C2 0.16499(8) 0.77190(11) 0.20736(8) 0.0420(3) Uani d . 1 C H2A 0.1827 0.7762 0.1469 0.050 Uiso calc R 1 H H2B 0.1946 0.8374 0.2391 0.050 Uiso calc R 1 H C3 0.11673(7) 0.57630(11) 0.25124(7) 0.0328(2) Uani d . 1 C C4 0.03200(7) 0.64140(10) 0.21759(7) 0.0328(3) Uani d . 1 C C5 -0.04764(8) 0.62377(11) 0.27820(8) 0.0404(3) Uani d . 1 C C6 -0.09548(12) 0.61748(17) 0.42362(11) 0.0694(5) Uani d . 1 C H6A -0.0719 0.6308 0.4808 0.104 Uiso calc R 1 H H6B -0.1167 0.5345 0.4187 0.104 Uiso calc R 1 H H6C -0.1447 0.6731 0.4133 0.104 Uiso calc R 1 H C7 0.00697(8) 0.59029(12) 0.12725(8) 0.0403(3) Uani d . 1 C H7B -0.0210 0.5105 0.1350 0.048 Uiso calc R 1 H H7A -0.0380 0.6440 0.1017 0.048 Uiso calc R 1 H C8 0.08392(8) 0.57662(12) 0.06375(7) 0.0386(3) Uani d . 1 C C9 0.13525(10) 0.47044(14) 0.06274(9) 0.0513(3) Uani d . 1 C H9A 0.1229 0.4084 0.1024 0.062 Uiso calc R 1 H C10 0.20459(12) 0.45507(19) 0.00378(11) 0.0688(5) Uani d . 1 C H10A 0.2385 0.3832 0.0043 0.083 Uiso calc R 1 H C11 0.22365(12) 0.5451(2) -0.05541(10) 0.0736(6) Uani d . 1 C H11A 0.2704 0.5346 -0.0951 0.088 Uiso calc R 1 H C12 0.17306(14) 0.65126(18) -0.05571(9) 0.0685(5) Uani d . 1 C H12A 0.1858 0.7128 -0.0956 0.082 Uiso calc R 1 H C13 0.10325(12) 0.66659(14) 0.00331(8) 0.0531(3) Uani d . 1 C H13A 0.0690 0.7382 0.0022 0.064 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0219(5) 0.0471(5) 0.0496(6) -0.0026(4) -0.0018(4) -0.0004(4) O1 0.0561(6) 0.0449(5) 0.0600(6) 0.0152(4) 0.0057(5) 0.0066(4) O2 0.0370(5) 0.0430(5) 0.0540(5) 0.0015(3) -0.0019(4) 0.0078(4) O3 0.0438(5) 0.0706(7) 0.0479(5) -0.0145(4) 0.0172(4) -0.0111(4) O4 0.0232(5) 0.1057(10) 0.0755(7) -0.0037(5) 0.0044(4) -0.0009(7) C1 0.0353(6) 0.0355(6) 0.0445(6) 0.0008(4) 0.0044(5) -0.0033(4) C2 0.0350(6) 0.0429(6) 0.0482(6) -0.0092(5) 0.0035(5) -0.0018(5) C3 0.0236(5) 0.0403(6) 0.0347(5) 0.0006(4) 0.0009(4) -0.0028(4) C4 0.0211(5) 0.0376(6) 0.0397(6) 0.0001(4) 0.0015(4) -0.0021(4) C5 0.0250(5) 0.0435(6) 0.0525(7) 0.0007(4) 0.0063(5) -0.0026(5) C6 0.0669(11) 0.0759(11) 0.0656(10) -0.0140(8) 0.0375(8) -0.0086(8) C7 0.0279(5) 0.0489(6) 0.0443(6) -0.0009(5) -0.0042(4) -0.0061(5) C8 0.0342(6) 0.0458(6) 0.0359(6) -0.0034(5) -0.0055(4) -0.0065(5) C9 0.0545(8) 0.0541(8) 0.0452(7) 0.0092(6) -0.0008(6) -0.0076(6) C10 0.0567(9) 0.0944(12) 0.0554(9) 0.0218(9) -0.0006(7) -0.0240(8) C11 0.0483(8) 0.1259(17) 0.0467(8) -0.0147(10) 0.0084(6) -0.0302(9) C12 0.0790(12) 0.0898(12) 0.0367(7) -0.0329(10) 0.0031(7) -0.0043(7) C13 0.0643(9) 0.0552(8) 0.0399(6) -0.0055(6) -0.0057(6) -0.0005(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C3 N1 C2 115.41(10) yes C3 N1 H1A 122.3 ? C2 N1 H1A 122.3 ? C1 O1 H1B 109.5 ? C5 O3 C6 116.07(12) yes O1 C1 C2 111.20(10) ? O1 C1 C4 114.65(10) ? C2 C1 C4 103.69(9) ? O1 C1 H1C 109.0 ? C2 C1 H1C 109.0 ? C4 C1 H1C 109.0 ? N1 C2 C1 102.68(9) ? N1 C2 H2A 111.2 ? C1 C2 H2A 111.2 ? N1 C2 H2B 111.2 ? C1 C2 H2B 111.2 ? H2A C2 H2B 109.1 ? O2 C3 N1 126.06(10) ? O2 C3 C4 125.73(10) ? N1 C3 C4 108.12(10) ? C5 C4 C3 111.57(9) ? C5 C4 C7 108.96(9) ? C3 C4 C7 109.58(9) ? C5 C4 C1 110.14(9) ? C3 C4 C1 102.27(8) ? C7 C4 C1 114.23(10) ? O4 C5 O3 123.98(12) ? O4 C5 C4 124.00(12) ? O3 C5 C4 112.02(10) ? O3 C6 H6A 109.5 ? O3 C6 H6B 109.5 ? H6A C6 H6B 109.5 ? O3 C6 H6C 109.5 ? H6A C6 H6C 109.5 ? H6B C6 H6C 109.5 ? C8 C7 C4 116.16(9) ? C8 C7 H7B 108.2 ? C4 C7 H7B 108.2 ? C8 C7 H7A 108.2 ? C4 C7 H7A 108.2 ? H7B C7 H7A 107.4 ? C13 C8 C9 118.13(13) ? C13 C8 C7 121.60(12) ? C9 C8 C7 120.23(12) ? C10 C9 C8 121.06(15) ? C10 C9 H9A 119.5 ? C8 C9 H9A 119.5 ? C11 C10 C9 120.38(16) ? C11 C10 H10A 119.8 ? C9 C10 H10A 119.8 ? C10 C11 C12 119.45(15) ? C10 C11 H11A 120.3 ? C12 C11 H11A 120.3 ? C11 C12 C13 120.20(15) ? C11 C12 H12A 119.9 ? C13 C12 H12A 119.9 ? C8 C13 C12 120.77(15) ? C8 C13 H13A 119.6 ? C12 C13 H13A 119.6 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag N1 C3 1.3313(15) yes N1 C2 1.4448(16) yes N1 H1A 0.8600 ? O1 C1 1.3988(15) yes O1 H1B 0.8200 ? O2 C3 1.2266(15) yes O3 C5 1.3210(17) yes O3 C6 1.4535(16) yes O4 C5 1.1994(15) yes C1 C2 1.5325(17) ? C1 C4 1.5605(15) ? C1 H1C 0.9800 ? C2 H2A 0.9700 ? C2 H2B 0.9700 ? C3 C4 1.5307(15) yes C4 C5 1.5166(15) yes C4 C7 1.5468(16) yes C6 H6A 0.9600 ? C6 H6B 0.9600 ? C6 H6C 0.9600 ? C7 C8 1.5094(17) yes C7 H7B 0.9700 ? C7 H7A 0.9700 ? C8 C13 1.3833(19) yes C8 C9 1.3839(19) yes C9 C10 1.381(2) yes C9 H9A 0.9300 ? C10 C11 1.370(3) yes C10 H10A 0.9300 ? C11 C12 1.378(3) ? C11 H11A 0.9300 ? C12 C13 1.387(2) ? C12 H12A 0.9300 ? C13 H13A 0.9300 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1A O4 6_656 0.86 2.08 2.8847(14) 157 yes O1 H1B O2 3_555 0.82 1.91 2.7309(14) 176 yes C11 H11A O2 2_564 0.93 2.56 3.4747(19) 169 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C3 N1 C2 C1 17.87(14) O1 C1 C2 N1 -150.18(10) C4 C1 C2 N1 -26.48(12) C2 N1 C3 O2 176.15(11) C2 N1 C3 C4 -0.68(14) O2 C3 C4 C5 48.98(15) N1 C3 C4 C5 -134.17(10) O2 C3 C4 C7 -71.78(14) N1 C3 C4 C7 105.07(11) O2 C3 C4 C1 166.68(11) N1 C3 C4 C1 -16.47(11) O1 C1 C4 C5 -93.73(12) C2 C1 C4 C5 144.85(10) O1 C1 C4 C3 147.55(10) C2 C1 C4 C3 26.13(11) O1 C1 C4 C7 29.26(13) C2 C1 C4 C7 -92.16(11) C6 O3 C5 O4 3.5(2) C6 O3 C5 C4 -176.93(12) C3 C4 C5 O4 -136.14(14) C7 C4 C5 O4 -15.02(17) C1 C4 C5 O4 111.00(15) C3 C4 C5 O3 44.32(13) C7 C4 C5 O3 165.44(10) C1 C4 C5 O3 -68.54(13) C5 C4 C7 C8 -168.08(10) C3 C4 C7 C8 -45.75(14) C1 C4 C7 C8 68.30(13) C4 C7 C8 C13 -95.45(14) C4 C7 C8 C9 86.89(14) C13 C8 C9 C10 0.8(2) C7 C8 C9 C10 178.49(13) C8 C9 C10 C11 -0.3(2) C9 C10 C11 C12 0.0(2) C10 C11 C12 C13 -0.2(2) C9 C8 C13 C12 -1.0(2) C7 C8 C13 C12 -178.65(12) C11 C12 C13 C8 0.7(2)