#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2202184.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202184 loop_ _publ_author_name 'Smith, Graham' 'Sagatys, Dalius S.' _publ_section_title ; Ammonium 2-mercaptopyridine-3-carboxylate hydrate ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o540 _journal_page_last o541 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac 'H4 N 1+, C6 H4 N O2 S 1-, H2 O' _chemical_formula_moiety 'H4 N 1+, C6 H4 N O2 S 1-, H2 O' _chemical_formula_sum 'C6 H10 N2 O3 S' _chemical_formula_weight 190.22 _chemical_name_common 'ammonium thionicotinate hydrate' _chemical_name_systematic ; ammonium 2-mercaptopyridine-3-carboxylate hydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method ' SHELXL-97 ' _cell_angle_alpha 90.00 _cell_angle_beta 100.854(5) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.8327(4) _cell_length_b 10.8017(12) _cell_length_c 12.2436(5) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 18.9 _cell_measurement_theta_min 11.8 _cell_volume 887.47(12) _computing_cell_refinement ; MSC/AFC Diffractometer Control Software ; _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1999) ; _computing_data_reduction ; TEXSAN for Windows (Molecular Structure Corporation, 1999) ; _computing_molecular_graphics 'PLATON for Windows (Spek, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.970 _diffrn_measured_fraction_theta_max 0.970 _diffrn_measurement_device_type 'Rigaku AFC-7R' _diffrn_measurement_method \w--2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Rigaku rotating anode' _diffrn_radiation_type 'MoK\a ' _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.041 _diffrn_reflns_av_sigmaI/netI 0.109 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 2631 _diffrn_reflns_theta_full 29.6 _diffrn_reflns_theta_max 29.5 _diffrn_reflns_theta_min 2.5 _diffrn_standards_decay_% 0.51 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.335 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.424 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 400 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.33 _refine_diff_density_min -0.24 _refine_ls_goodness_of_fit_ref 0.996 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 138 _refine_ls_number_reflns 2451 _refine_ls_restrained_S_all 1.00 _refine_ls_R_factor_all 0.155 _refine_ls_R_factor_gt 0.040 _refine_ls_shift/su_max 0.00 _refine_ls_shift/su_mean <0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.1032P)^2^+0.154P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.113 _refine_ls_wR_factor_ref 0.174 _reflns_number_gt 1113 _reflns_number_total 2451 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file tk6097.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _[local]_cod_cif_authors_sg_Hall '-P 2yn ' _cod_database_code 2202184 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x+1/2, -y+1/2, z+1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S2 0.0459(5) 0.0313(4) 0.0300(4) -0.0004(4) 0.0079(3) -0.0025(4) O71 0.0400(14) 0.0517(15) 0.0239(11) -0.0036(12) 0.0097(9) -0.0009(10) O72 0.0325(13) 0.0464(14) 0.0281(11) 0.0001(11) -0.0039(9) -0.0002(11) N1 0.0356(16) 0.0439(17) 0.0207(12) -0.0019(14) 0.0005(11) -0.0052(12) C2 0.0242(16) 0.0354(18) 0.0222(14) -0.0004(13) 0.0030(11) -0.0007(12) C3 0.0250(15) 0.0323(17) 0.0208(12) 0.0005(13) 0.0037(10) -0.0012(12) C4 0.042(2) 0.0314(17) 0.0335(17) 0.0011(15) 0.0066(14) -0.0007(14) C5 0.048(2) 0.037(2) 0.0326(17) 0.0069(16) 0.0070(14) 0.0131(14) C6 0.044(2) 0.054(2) 0.0229(15) 0.0070(18) 0.0016(14) 0.0103(16) C7 0.0322(17) 0.0257(15) 0.0218(13) 0.0039(13) 0.0021(11) -0.0022(12) N11 0.0437(17) 0.0412(18) 0.0298(14) 0.0062(14) 0.0040(12) 0.0003(12) O2 0.0365(15) 0.091(2) 0.0523(17) -0.0042(15) 0.0074(12) -0.0295(16) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_type_symbol S2 0.16986(13) 0.37274(8) 0.37160(7) 0.0356(3) Uani 1.000 S O71 0.2178(3) 0.1737(2) 0.16045(17) 0.0381(8) Uani 1.000 O O72 -0.0904(3) 0.1222(2) 0.17581(17) 0.0369(7) Uani 1.000 O N1 0.2715(4) 0.1932(3) 0.5196(2) 0.0340(9) Uani 1.000 N C2 0.2008(4) 0.2221(3) 0.4105(2) 0.0274(9) Uani 1.000 C C3 0.1579(4) 0.1187(3) 0.3383(2) 0.0261(9) Uani 1.000 C C4 0.1793(5) -0.0004(3) 0.3796(3) 0.0357(10) Uani 1.000 C C5 0.2488(5) -0.0213(3) 0.4930(3) 0.0393(11) Uani 1.000 C C6 0.2945(5) 0.0767(4) 0.5616(3) 0.0409(11) Uani 1.000 C C7 0.0906(5) 0.1411(3) 0.2149(2) 0.0270(9) Uani 1.000 C N11 0.2151(4) 0.1086(3) -0.0645(2) 0.0386(9) Uani 1.000 N O2 0.6010(4) 0.2069(3) 0.2788(2) 0.0601(10) Uani 1.000 O H1 0.316(5) 0.261(4) 0.570(3) 0.047(11) Uiso 1.000 H H4 0.150800 -0.068400 0.331400 0.0430 Uiso 1.000 H H5 0.264800 -0.101200 0.522700 0.0480 Uiso 1.000 H H6 0.344400 0.068900 0.638000 0.0500 Uiso 1.000 H H11 0.147(8) 0.034(6) -0.092(5) 0.080(16) Uiso 1.000 H H12 0.194(7) 0.127(6) 0.013(5) 0.079(15) Uiso 1.000 H H13 0.136(7) 0.157(5) -0.116(4) 0.069(15) Uiso 1.000 H H14 0.346(6) 0.116(5) -0.067(5) 0.075(14) Uiso 1.000 H H21 0.475(6) 0.189(6) 0.237(6) 0.066(15) Uiso 1.000 H H22 0.702(7) 0.179(6) 0.258(6) 0.070(15) Uiso 1.000 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag H21 O2 H22 119(6) no C2 N1 C6 125.2(3) no C6 N1 H1 117(2) no C2 N1 H1 117(2) no H11 N11 H14 119(5) no H12 N11 H13 112(5) no H12 N11 H14 109(5) no H13 N11 H14 113(5) no H11 N11 H13 93(5) no H11 N11 H12 111(5) no S2 C2 C3 125.4(2) no S2 C2 N1 119.7(2) no N1 C2 C3 114.9(3) no C2 C3 C7 118.9(3) no C2 C3 C4 120.7(3) no C4 C3 C7 120.4(3) no C3 C4 C5 120.5(3) no C4 C5 C6 119.1(3) no N1 C6 C5 119.6(3) no O71 C7 C3 118.0(3) no O72 C7 C3 116.5(3) no O71 C7 O72 125.5(2) no C3 C4 H4 120.24 no C5 C4 H4 119.27 no C4 C5 H5 121.88 no C6 C5 H5 119.02 no N1 C6 H6 117.12 no C5 C6 H6 123.25 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S2 C2 1.697(3) no O71 C7 1.242(4) no O72 C7 1.256(4) no O2 H21 0.94(5) no O2 H22 0.84(5) no N1 C6 1.357(5) no N1 C2 1.368(3) no N1 H1 0.97(4) no N11 H13 0.91(5) no N11 H11 0.96(6) no N11 H12 1.01(6) no N11 H14 0.90(4) no C2 C3 1.420(4) no C3 C4 1.380(5) no C3 C7 1.514(3) no C4 C5 1.399(5) no C5 C6 1.351(5) no C4 H4 0.9394 no C5 H5 0.9349 no C6 H6 0.9371 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O72 4_555 0.97(4) 1.83(4) 2.801(4) 174(4) yes N11 H11 O72 3_555 0.96(6) 1.97(6) 2.892(4) 159(5) yes N11 H12 O71 . 1.01(6) 1.85(6) 2.839(3) 166(4) yes N11 H13 O2 4_454 0.91(5) 1.94(5) 2.774(4) 151(4) yes N11 H14 S2 4_554 0.90(4) 2.47(4) 3.350(3) 164(5) yes O2 H21 O71 . 0.94(5) 1.84(5) 2.767(3) 173(6) yes O2 H22 O72 1_655 0.84(5) 1.98(6) 2.806(3) 167(7) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C6 N1 C2 S2 177.0(3) no C6 N1 C2 C3 -2.6(4) no C2 N1 C6 C5 1.1(5) no N1 C2 C3 C4 2.9(4) no N1 C2 C3 C7 -176.4(3) no S2 C2 C3 C4 -176.8(2) no S2 C2 C3 C7 4.0(4) no C2 C3 C4 C5 -1.7(5) no C2 C3 C7 O71 75.1(4) no C2 C3 C7 O72 -106.5(3) no C7 C3 C4 C5 177.5(3) no C4 C3 C7 O72 74.3(4) no C4 C3 C7 O71 -104.2(4) no C3 C4 C5 C6 0.1(5) no C4 C5 C6 N1 0.3(6) no