#------------------------------------------------------------------------------ #$Date: 2012-02-03 17:16:24 +0000 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/22/2202215.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202215 loop_ _publ_author_name 'Reena Ittyachan' 'P. Sagayaraj' 'Babu Kothandapani' _publ_section_title ; L-Argininium bis(dihydrogen phosphate) ; _journal_issue 6 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o886 _journal_page_last o888 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac 'C6 H16 N4 O2 2+, 2H2 P O4 1-' _chemical_formula_moiety 'C6 H16 N4 O2 2+, 2H2 P O4 1-' _chemical_formula_sum 'C6 H20 N4 O10 P2' _chemical_formula_weight 370.20 _chemical_name_common ; L-argininium bis(dihydrogen phosphate) ; _chemical_name_systematic ; L-argininium bis(dihydrogen phosphate) ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.9910(2) _cell_length_b 9.6760(5) _cell_length_c 21.735(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 23.8 _cell_measurement_theta_min 15.2 _cell_volume 1470.26(16) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'CAD-4 Software' _computing_molecular_graphics 'PLATON (Spek, 1999)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54180 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.0108 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 0 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 0 _diffrn_reflns_limit_l_min -26 _diffrn_reflns_number 1567 _diffrn_reflns_theta_full 67.92 _diffrn_reflns_theta_max 67.92 _diffrn_reflns_theta_min 4.07 _diffrn_standards_decay_% none _diffrn_standards_interval_time 60 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 3.277 _exptl_absorpt_correction_T_max 0.519 _exptl_absorpt_correction_T_min 0.367 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1967)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.672 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 776 _exptl_crystal_size_max 0.3 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.2 _refine_diff_density_max 0.571 _refine_diff_density_min -0.823 _refine_ls_extinction_coef 0.047(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.272 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 216 _refine_ls_number_reflns 1567 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.272 _refine_ls_R_factor_all 0.0441 _refine_ls_R_factor_gt 0.0439 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.1002P)^2^+0.2388P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_gt 0.1311 _refine_ls_wR_factor_ref 0.1317 _reflns_number_gt 1548 _reflns_number_total 1567 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file wn6151.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2202215 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol P1 0.80681(13) 0.37460(9) 0.53565(4) 0.0193(3) Uani d . 1 . . P O3 0.7445(4) 0.3503(3) 0.60100(12) 0.0300(7) Uani d . 1 . . O O4 1.0137(3) 0.4192(3) 0.52937(12) 0.0226(6) Uani d . 1 . . O O5 0.6760(4) 0.4833(3) 0.50331(12) 0.0302(7) Uani d . 1 . . O H5 0.596(7) 0.519(5) 0.524(2) 0.023(12) Uiso d . 1 . . H O6 0.7961(4) 0.2402(3) 0.49577(18) 0.0370(7) Uani d . 1 . . O H6 0.680(8) 0.198(5) 0.492(2) 0.033(13) Uiso d . 1 . . H P2 0.86870(13) 0.91646(9) 0.36808(4) 0.0185(3) Uani d . 1 . . P O7 0.8041(4) 0.8017(3) 0.32634(11) 0.0282(7) Uani d . 1 . . O O8 0.9260(4) 0.8732(3) 0.43213(10) 0.0235(6) Uani d . 1 . . O O9 1.0382(4) 0.9917(3) 0.33515(12) 0.0282(6) Uani d . 1 . . O H9 1.105(8) 1.066(6) 0.372(2) 0.041(14) Uiso d . 1 . . H O10 0.7080(4) 1.0301(3) 0.37063(13) 0.0297(7) Uani d . 1 . . O H10 0.616(10) 1.043(8) 0.389(4) 0.08(2) Uiso d . 1 . . H O1 2.0545(4) -0.1214(3) 0.64127(13) 0.0318(7) Uani d . 1 . . O H1 2.1419 -0.1763 0.6473 0.048 Uiso calc R 1 . . H O2 1.9592(5) -0.2794(3) 0.57282(14) 0.0392(8) Uani d . 1 . . O C1 1.9410(5) -0.1696(4) 0.59857(16) 0.0228(8) Uani d . 1 . . C C2 1.7750(5) -0.0727(4) 0.58508(16) 0.0205(7) Uani d . 1 . . C H2 1.8267 0.0151 0.5699 0.025 Uiso calc R 1 . . H N1 1.6597(5) -0.1375(3) 0.53498(14) 0.0222(7) Uani d . 1 . . N H1A 1.5613 -0.0830 0.5257 0.033 Uiso calc R 1 . . H H1B 1.6164 -0.2193 0.5476 0.033 Uiso calc R 1 . . H H1C 1.7327 -0.1490 0.5018 0.033 Uiso calc R 1 . . H C3 1.6549(5) -0.0437(4) 0.64168(15) 0.0232(8) Uani d . 1 . . C H3A 1.7370 -0.0061 0.6735 0.028 Uiso calc R 1 . . H H3B 1.6034 -0.1304 0.6568 0.028 Uiso calc R 1 . . H C4 1.4900(6) 0.0562(4) 0.63093(17) 0.0243(8) Uani d . 1 . . C H4A 1.5364 0.1389 0.6106 0.029 Uiso calc R 1 . . H H4B 1.3946 0.0135 0.6047 0.029 Uiso calc R 1 . . H C5 1.4024(6) 0.0931(5) 0.69191(18) 0.0304(9) Uani d . 1 . . C H5A 1.3697 0.0090 0.7138 0.036 Uiso calc R 1 . . H H5B 1.4957 0.1429 0.7164 0.036 Uiso calc R 1 . . H N2 1.2309(5) 0.1781(4) 0.68503(15) 0.0288(8) Uani d . 1 . . N H2A 1.2237 0.2333 0.6541 0.035 Uiso calc R 1 . . H C6 1.0861(5) 0.1738(4) 0.72423(16) 0.0212(7) Uani d . 1 . . C N3 1.0996(5) 0.1038(4) 0.77659(16) 0.0325(8) Uani d . 1 . . N H3C 1.2034 0.0605 0.7854 0.039 Uiso calc R 1 . . H H3D 1.0045 0.1018 0.8017 0.039 Uiso calc R 1 . . H N4 0.9217(5) 0.2377(4) 0.71153(17) 0.0334(9) Uani d . 1 . . N H4C 0.9089 0.2823 0.6776 0.040 Uiso calc R 1 . . H H4D 0.8285 0.2343 0.7373 0.040 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 0.0166(5) 0.0189(5) 0.0225(5) -0.0009(4) 0.0018(3) -0.0022(3) O3 0.0296(14) 0.0323(14) 0.0281(14) 0.0049(12) 0.0036(13) 0.0095(12) O4 0.0174(13) 0.0223(12) 0.0282(13) -0.0033(11) 0.0018(10) -0.0044(10) O5 0.0260(15) 0.0406(16) 0.0241(13) 0.0120(14) 0.0030(12) 0.0022(12) O6 0.0251(14) 0.0288(14) 0.0570(19) -0.0033(13) 0.0012(14) -0.0181(14) P2 0.0160(5) 0.0230(5) 0.0166(5) -0.0011(4) 0.0002(3) -0.0007(3) O7 0.0283(14) 0.0332(14) 0.0231(11) -0.0076(13) -0.0001(12) -0.0051(11) O8 0.0233(12) 0.0275(13) 0.0197(11) -0.0028(12) -0.0027(10) 0.0019(10) O9 0.0259(15) 0.0353(13) 0.0232(12) -0.0071(13) 0.0073(12) -0.0025(11) O10 0.0271(15) 0.0342(15) 0.0279(13) 0.0127(13) 0.0059(12) 0.0066(12) O1 0.0256(14) 0.0296(13) 0.0402(15) 0.0053(13) -0.0123(13) -0.0079(13) O2 0.0426(17) 0.0333(16) 0.0418(17) 0.0179(14) -0.0130(15) -0.0173(14) C1 0.0217(17) 0.0251(18) 0.0217(15) 0.0015(16) 0.0025(15) -0.0005(15) C2 0.0211(17) 0.0195(15) 0.0210(15) -0.0007(15) 0.0003(14) -0.0009(14) N1 0.0225(15) 0.0236(14) 0.0205(13) 0.0019(14) 0.0000(13) -0.0003(12) C3 0.0235(18) 0.0263(17) 0.0197(15) 0.0023(16) 0.0011(15) -0.0024(14) C4 0.0221(18) 0.0274(17) 0.0235(16) 0.0008(16) 0.0021(14) -0.0002(15) C5 0.0238(19) 0.043(2) 0.0241(16) 0.0088(19) 0.0033(16) -0.0002(17) N2 0.0302(17) 0.0286(16) 0.0277(16) 0.0089(16) 0.0033(15) 0.0057(14) C6 0.0224(17) 0.0223(16) 0.0190(15) 0.0008(15) 0.0038(14) -0.0034(14) N3 0.0254(16) 0.044(2) 0.0278(16) 0.0072(16) 0.0040(14) 0.0085(15) N4 0.0275(19) 0.042(2) 0.0306(17) 0.0131(18) 0.0025(14) 0.0059(16) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P1 O3 . 1.504(3) y P1 O4 . 1.515(3) y P1 O5 . 1.561(3) y P1 O6 . 1.565(3) y P2 O7 . 1.503(3) y P2 O8 . 1.508(2) y P2 O9 . 1.564(3) y P2 O10 . 1.573(3) y O1 C1 . 1.307(5) y O2 C1 . 1.208(5) y C1 C2 . 1.521(5) ? C2 N1 . 1.493(4) ? C2 C3 . 1.516(5) ? C3 C4 . 1.522(5) ? C4 C5 . 1.503(5) ? C5 N2 . 1.462(5) ? N2 C6 . 1.324(5) ? C6 N3 . 1.328(5) ? C6 N4 . 1.334(5) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.2955 0.4335 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O3 P1 O4 113.96(16) O3 P1 O5 111.15(16) O4 P1 O5 109.07(16) O3 P1 O6 112.29(19) O4 P1 O6 103.45(16) O5 P1 O6 106.40(18) O7 P2 O8 115.60(16) O7 P2 O9 107.17(15) O8 P2 O9 110.52(16) O7 P2 O10 108.84(17) O8 P2 O10 110.55(15) O9 P2 O10 103.42(17) O2 C1 O1 125.4(4) O2 C1 C2 122.3(3) O1 C1 C2 112.3(3) N1 C2 C3 111.7(3) N1 C2 C1 107.1(3) C3 C2 C1 112.4(3) C2 C3 C4 114.4(3) C5 C4 C3 108.9(3) N2 C5 C4 112.2(3) C6 N2 C5 123.0(3) N2 C6 N3 120.9(3) N2 C6 N4 120.7(3) N3 C6 N4 118.4(3) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O5 H5 O8 3_466 0.79(5) 1.85(5) 2.637(4) 172(5) O6 H6 O4 3_456 0.91(6) 1.69(5) 2.564(4) 159(5) O9 H9 O3 3_566 1.18(5) 1.39(5) 2.518(4) 157(5) O10 H10 O4 3_466 0.77(7) 1.94(8) 2.610(4) 145(7) O1 H1 O7 3_656 0.82 1.76 2.566(4) 169 N1 H1A O4 3_556 0.89 2.01 2.732(4) 137 N1 H1B O8 3_556 0.89 2.05 2.895(4) 159 N1 H1C O8 1_645 0.89 2.04 2.911(4) 165 N2 H2A O10 3_566 0.86 2.35 3.077(5) 142 N3 H3C O9 2_765 0.86 2.16 2.981(4) 158 N3 H3D O7 2_665 0.86 2.41 3.158(5) 146 N3 H3D O10 2_665 0.86 2.47 3.237(5) 150 N4 H4C O3 . 0.86 2.13 2.914(5) 152 N4 H4D O7 2_665 0.86 2.17 2.977(5) 155 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O2 C1 C2 N1 -2.8(5) y O1 C1 C2 N1 178.7(3) ? O2 C1 C2 C3 120.3(4) ? O1 C1 C2 C3 -58.2(4) ? N1 C2 C3 C4 -61.3(4) y C1 C2 C3 C4 178.4(3) ? C2 C3 C4 C5 -171.2(3) y C3 C4 C5 N2 -174.3(3) y C4 C5 N2 C6 149.0(4) y C5 N2 C6 N3 8.5(6) ? C5 N2 C6 N4 -170.2(4) y