#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/22/2202253.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202253 loop_ _publ_author_name 'Arrieta, Antonio F.' 'Mostad, Arvid' _publ_section_title ; 5-(1H-Indol-3-yl)-1-phenylpent-4-ene-1,3-dione ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o524 _journal_page_last o526 _journal_paper_doi 10.1107/S1600536803003192 _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C19 H15 N O2' _chemical_formula_sum 'C19 H15 N O2' _chemical_formula_weight 289.31 _chemical_melting_point 480 _chemical_name_systematic ; 1-phenyl-5-(3-indolyl)-pent-4-ene-1,3-dione ; _space_group_IT_number 29 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2c -2ac' _symmetry_space_group_name_H-M 'P c a 21' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.6712(15) _cell_length_b 5.6251(11) _cell_length_c 32.773(7) _cell_measurement_reflns_used 6355 _cell_measurement_temperature 105(2) _cell_measurement_theta_max 27.0 _cell_measurement_theta_min 2.0 _cell_volume 1414.2(5) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction 'SAINT (Bruker, 1998)' _computing_molecular_graphics SHELXL97 _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 105(2) _diffrn_detector_area_resol_mean 8 _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Bruker SMART' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.052 _diffrn_reflns_av_sigmaI/netI 0.025 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 41 _diffrn_reflns_limit_l_min -41 _diffrn_reflns_number 14386 _diffrn_reflns_theta_full 27.0 _diffrn_reflns_theta_max 27.0 _diffrn_reflns_theta_min 1.2 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.09 _exptl_absorpt_correction_T_max 0.965 _exptl_absorpt_correction_T_min 0.876 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1997)' _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.354 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plates _exptl_crystal_F_000 608 _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.4 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.16 _refine_diff_density_min -0.19 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack -1.8(14) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.09 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 259 _refine_ls_number_reflns 3044 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.09 _refine_ls_R_factor_all 0.052 _refine_ls_R_factor_gt 0.037 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0532P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.081 _refine_ls_wR_factor_ref 0.097 _reflns_number_gt 2508 _reflns_number_total 3044 _reflns_threshold_expression I>2\s(I) _cod_data_source_file ya6151.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2202253 _cod_database_fobs_code 2202253 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' 'x+1/2, -y, z' '-x+1/2, y, z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 0.8753(3) 1.0093(3) 0.94133(5) 0.0370(4) Uani d . 1 . . O O2 0.9308(2) 0.8529(3) 0.87118(5) 0.0333(4) Uani d . 1 . . O H200 0.928(6) 0.964(8) 0.9023(14) 0.102(14) Uiso d . 1 . . H N 0.7701(2) -0.0183(3) 0.74798(6) 0.0247(4) Uani d . 1 . . N H1N 0.715(3) -0.145(5) 0.7420(7) 0.033(7) Uiso d . 1 . . H C1 0.7848(3) 0.9531(4) 1.02260(7) 0.0238(5) Uani d . 1 . . C H1 0.847(3) 1.094(4) 1.0131(7) 0.026(6) Uiso d . 1 . . H C2 0.7326(3) 0.9276(4) 1.06316(7) 0.0267(5) Uani d . 1 . . C H2 0.753(4) 1.059(5) 1.0831(8) 0.033(7) Uiso d . 1 . . H C3 0.6404(3) 0.7276(4) 1.07519(7) 0.0273(5) Uani d . 1 . . C H3 0.603(3) 0.704(4) 1.1015(8) 0.021(6) Uiso d . 1 . . H C4 0.5974(3) 0.5543(4) 1.04686(7) 0.0276(5) Uani d . 1 . . C H4 0.522(3) 0.414(4) 1.0554(6) 0.018(6) Uiso d . 1 . . H C5 0.6484(3) 0.5789(4) 1.00636(7) 0.0250(5) Uani d . 1 . . C H5 0.620(3) 0.465(3) 0.9896(6) 0.006(5) Uiso d . 1 . . H C6 0.7435(3) 0.7790(4) 0.99375(6) 0.0229(5) Uani d . 1 . . C C7 0.8039(3) 0.8105(4) 0.95101(7) 0.0247(5) Uani d . 1 . . C C8 0.7890(3) 0.6264(4) 0.92177(7) 0.0269(5) Uani d . 1 . . C H8 0.743(3) 0.482(5) 0.9298(8) 0.035(7) Uiso d . 1 . . H C9 0.8509(3) 0.6554(4) 0.88231(7) 0.0251(5) Uani d . 1 . . C C10 0.8283(3) 0.4692(4) 0.85197(7) 0.0272(5) Uani d . 1 . . C H10 0.763(3) 0.328(5) 0.8631(7) 0.032(7) Uiso d . 1 . . H C11 0.8859(3) 0.4849(4) 0.81351(7) 0.0230(4) Uani d . 1 . . C H11 0.944(3) 0.627(4) 0.8060(7) 0.024(6) Uiso d . 1 . . H C12 0.8584(3) 0.3088(4) 0.78176(7) 0.0227(4) Uani d . 1 . . C C13 0.9169(3) 0.3255(3) 0.73982(6) 0.0195(4) Uani d . 1 . . C C14 1.0112(3) 0.4936(4) 0.71737(7) 0.0212(4) Uani d . 1 . . C H14 1.040(3) 0.646(5) 0.7292(8) 0.036(7) Uiso d . 1 . . H C15 1.0470(3) 0.4501(4) 0.67646(7) 0.0240(5) Uani d . 1 . . C H15 1.105(3) 0.563(5) 0.6603(8) 0.034(7) Uiso d . 1 . . H C16 0.9867(3) 0.2412(4) 0.65718(8) 0.0258(5) Uani d . 1 . . C H16 1.013(3) 0.213(4) 0.6295(8) 0.027(6) Uiso d . 1 . . H C17 0.8917(3) 0.0729(4) 0.67845(7) 0.0233(5) Uani d . 1 . . C H17 0.852(3) -0.059(4) 0.6639(7) 0.025(6) Uiso d . 1 . . H C18 0.8577(3) 0.1163(3) 0.71976(7) 0.0211(4) Uani d . 1 . . C C19 0.7689(3) 0.0959(4) 0.78478(7) 0.0247(5) Uani d . 1 . . C H19 0.719(3) 0.020(4) 0.8097(8) 0.022(6) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0559(11) 0.0283(8) 0.0266(9) -0.0120(8) 0.0054(8) -0.0016(7) O2 0.0466(10) 0.0276(8) 0.0258(9) -0.0067(8) 0.0053(8) -0.0019(7) N 0.0232(10) 0.0192(8) 0.0315(11) -0.0025(7) -0.0018(8) -0.0018(8) C1 0.0259(12) 0.0203(10) 0.0252(12) 0.0014(9) 0.0005(9) 0.0000(8) C2 0.0273(12) 0.0269(11) 0.0261(12) 0.0040(9) -0.0012(10) -0.0055(9) C3 0.0293(12) 0.0310(12) 0.0217(11) 0.0047(10) 0.0012(10) 0.0021(10) C4 0.0291(12) 0.0256(11) 0.0281(12) 0.0013(10) -0.0003(10) 0.0026(9) C5 0.0274(12) 0.0233(11) 0.0242(12) -0.0010(9) -0.0030(10) -0.0050(9) C6 0.0230(10) 0.0235(10) 0.0222(11) 0.0047(9) -0.0008(9) 0.0000(8) C7 0.0251(12) 0.0248(11) 0.0243(11) 0.0005(9) -0.0011(9) 0.0010(9) C8 0.0319(13) 0.0231(11) 0.0258(12) -0.0048(9) 0.0021(9) -0.0003(9) C9 0.0262(11) 0.0254(10) 0.0238(12) 0.0033(9) -0.0009(9) -0.0017(9) C10 0.0270(11) 0.0269(12) 0.0276(13) -0.0019(9) -0.0001(10) 0.0013(9) C11 0.0221(11) 0.0211(10) 0.0258(11) 0.0027(8) -0.0014(9) -0.0009(9) C12 0.0203(10) 0.0209(9) 0.0269(11) 0.0029(8) -0.0032(9) -0.0002(9) C13 0.0174(9) 0.0186(9) 0.0226(11) 0.0039(7) -0.0025(9) -0.0022(8) C14 0.0173(10) 0.0185(9) 0.0277(11) 0.0016(8) -0.0018(9) 0.0000(9) C15 0.0200(10) 0.0247(11) 0.0274(12) 0.0013(9) 0.0018(9) 0.0026(9) C16 0.0222(11) 0.0314(12) 0.0237(11) 0.0040(10) 0.0004(9) -0.0036(9) C17 0.0209(11) 0.0226(10) 0.0266(12) 0.0030(8) -0.0034(9) -0.0059(9) C18 0.0179(10) 0.0173(9) 0.0279(12) 0.0032(7) -0.0028(9) 0.0000(8) C19 0.0218(11) 0.0251(10) 0.0272(13) 0.0032(9) 0.0013(10) 0.0037(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C7 O1 H200 101.4(19) n C9 O2 H200 101(2) n C19 N C18 109.81(18) y C19 N H1N 126.4(17) n C18 N H1N 123.4(17) n C2 C1 C6 120.5(2) n C2 C1 H1 121.8(14) n C6 C1 H1 117.7(14) n C3 C2 C1 120.1(2) n C3 C2 H2 119.6(15) n C1 C2 H2 120.1(16) n C4 C3 C2 120.1(2) n C4 C3 H3 116.8(15) n C2 C3 H3 123.1(15) n C3 C4 C5 120.2(2) n C3 C4 H4 119.8(12) n C5 C4 H4 119.9(12) n C4 C5 C6 120.4(2) n C4 C5 H5 117.4(14) n C6 C5 H5 122.2(14) n C1 C6 C5 118.7(2) n C1 C6 C7 118.92(19) y C5 C6 C7 122.3(2) y O1 C7 C8 120.3(2) y O1 C7 C6 117.98(19) y C8 C7 C6 121.73(19) y C9 C8 C7 121.2(2) y C9 C8 H8 119.9(17) n C7 C8 H8 118.8(17) n O2 C9 C8 121.02(19) y O2 C9 C10 118.20(19) y C8 C9 C10 120.8(2) y C11 C10 C9 123.8(2) y C11 C10 H10 123.9(15) n C9 C10 H10 112.3(14) n C10 C11 C12 125.6(2) y C10 C11 H11 117.2(14) n C12 C11 H11 117.2(14) n C19 C12 C13 106.10(19) y C19 C12 C11 127.7(2) y C13 C12 C11 126.21(19) y C14 C13 C18 118.8(2) n C14 C13 C12 134.62(19) y C18 C13 C12 106.62(19) y C15 C14 C13 119.4(2) n C15 C14 H14 119.8(15) n C13 C14 H14 120.5(15) n C14 C15 C16 120.9(2) n C14 C15 H15 121.4(17) n C16 C15 H15 117.6(17) n C17 C16 C15 121.1(2) n C17 C16 H16 119.0(14) n C15 C16 H16 119.8(15) n C16 C17 C18 117.8(2) n C16 C17 H17 117.2(15) n C18 C17 H17 125.0(15) n N C18 C17 130.31(19) y N C18 C13 107.56(19) y C17 C18 C13 122.1(2) n N C19 C12 109.9(2) y N C19 H19 121.6(14) n C12 C19 H19 128.2(14) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C7 . 1.285(3) y O1 H200 . 1.37(5) n O2 C9 . 1.320(3) y O2 H200 . 1.20(5) n N C18 . 1.371(3) y N C19 . 1.367(3) y N H1N . 0.85(3) n C1 C2 . 1.396(3) n C1 C6 . 1.397(3) n C1 H1 . 0.98(3) n C2 C3 . 1.386(3) n C2 H2 . 1.00(3) n C3 C4 . 1.386(3) n C3 H3 . 0.92(2) n C4 C5 . 1.391(3) n C4 H4 . 1.02(2) n C5 C6 . 1.404(3) n C5 H5 . 0.87(2) n C6 C7 . 1.486(3) y C7 C8 . 1.415(3) y C8 C9 . 1.387(3) y C8 H8 . 0.93(3) n C9 C10 . 1.455(3) y C10 C11 . 1.339(3) y C10 H10 . 1.01(3) n C11 C12 . 1.452(3) y C11 H11 . 0.95(3) n C12 C13 . 1.449(3) y C12 C19 . 1.384(3) y C13 C14 . 1.400(3) n C13 C18 . 1.422(3) y C14 C15 . 1.390(3) n C14 H14 . 0.97(3) n C15 C16 . 1.412(3) n C15 H15 . 0.94(3) n C16 C17 . 1.383(3) n C16 H16 . 0.94(3) n C17 C18 . 1.400(3) n C17 H17 . 0.93(2) n C19 H19 . 1.00(2) n loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA C1 H1 C5 3_575 0.98(3) 2.96(3) 3.872(3) 155.4(19) C4 H4 C1 3_465 1.02(2) 2.95(2) 3.812(3) 142.4(15) C14 H14 N 1_565 0.97(3) 2.87(3) 3.459(3) 120.1(19) N H1N C13 3_455 0.85(3) 2.50(3) 3.225(3) 143(2) C3 H3 C15 4_655 0.92(2) 3.07(3) 3.939(3) 159.7(18) C16 H16 C2 2_764 0.94(3) 3.02(3) 3.877(3) 150.9(19) O2 H200 O1 . 1.20(5) 1.37(5) 2.498(2) 154(4) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C6 C1 C2 C3 0.5(3) n C1 C2 C3 C4 -1.0(4) n C2 C3 C4 C5 0.8(4) n C3 C4 C5 C6 -0.1(4) n C2 C1 C6 C5 0.2(3) n C2 C1 C6 C7 -178.96(19) y C4 C5 C6 C1 -0.4(3) n C4 C5 C6 C7 178.7(2) y C1 C6 C7 O1 -7.5(3) y C5 C6 C7 O1 173.4(2) y C1 C6 C7 C8 170.7(2) y C5 C6 C7 C8 -8.4(3) y O1 C7 C8 C9 0.2(3) y C6 C7 C8 C9 -177.9(2) y C7 C8 C9 O2 2.2(3) y C7 C8 C9 C10 -177.3(2) y O2 C9 C10 C11 1.0(3) y C8 C9 C10 C11 -179.5(2) y C9 C10 C11 C12 -176.7(2) y C10 C11 C12 C19 0.4(4) y C10 C11 C12 C13 178.7(2) y C19 C12 C13 C14 179.6(2) n C11 C12 C13 C14 1.0(4) n C19 C12 C13 C18 -0.1(2) n C11 C12 C13 C18 -178.71(19) n C18 C13 C14 C15 -1.1(3) n C12 C13 C14 C15 179.3(2) n C13 C14 C15 C16 1.2(3) n C14 C15 C16 C17 -0.6(3) n C15 C16 C17 C18 -0.2(3) n C19 N C18 C17 -179.8(2) n C19 N C18 C13 0.7(2) n C16 C17 C18 N -179.1(2) n C16 C17 C18 C13 0.2(3) n C14 C13 C18 N 179.89(17) n C12 C13 C18 N -0.4(2) n C14 C13 C18 C17 0.4(3) n C12 C13 C18 C17 -179.87(19) n C18 N C19 C12 -0.8(2) n C13 C12 C19 N 0.6(2) n C11 C12 C19 N 179.1(2) n loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 30654701 2 PubChem 71692088