#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/22/2202274.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202274 loop_ _publ_author_name 'Napolitano, H. B.' 'Silva, M.' 'Ellena, J.' 'Rocha, W. C.' 'Vieira, P. C.' 'Thiemann, O. H.' 'Oliva, G.' _publ_section_title ; Redetermination and comparative structural study of isopimpinellin: a new inhibitor against the Leishmania APRT enzyme ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1506 _journal_page_last o1508 _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C13 H10 O5' _chemical_formula_sum 'C13 H10 O5' _chemical_formula_weight 246.21 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 117.2180(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 16.9357(5) _cell_length_b 4.36690(10) _cell_length_c 16.2558(4) _cell_measurement_reflns_used 2772 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.485 _cell_measurement_theta_min 0.998 _cell_volume 1069.10(5) _computing_cell_refinement 'HKL Scalepack (Otwinowski & Minor, 1997)' _computing_data_collection 'COLLECT (Nonius, 1998)' _computing_data_reduction 'HKL Denzo (Otwinowski & Minor, 1997) and Scalepack' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2002)' _computing_publication_material 'WinGX publication routines (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device '95mm CCD camera on\k-goniostat' _diffrn_measurement_device_type KappaCCD _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0229 _diffrn_reflns_limit_h_max 22 _diffrn_reflns_limit_h_min -21 _diffrn_reflns_limit_k_max 5 _diffrn_reflns_limit_k_min -4 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -21 _diffrn_reflns_number 4114 _diffrn_reflns_theta_full 27.51 _diffrn_reflns_theta_max 27.51 _diffrn_reflns_theta_min 2.51 _diffrn_standards_decay_% none _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.119 _exptl_absorpt_correction_type none _exptl_crystal_colour 'light yellow' _exptl_crystal_density_diffrn 1.53 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 512 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.16 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.232 _refine_diff_density_min -0.3 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.044 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 197 _refine_ls_number_reflns 2450 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.044 _refine_ls_R_factor_gt 0.0441 _refine_ls_shift/su_max 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0713P)^2^+0.1752P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.1236 _reflns_number_gt 1841 _reflns_number_total 2450 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ac6055.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_database_code 2202274 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 0.25821(7) -0.3321(2) 0.15311(7) 0.0290(3) Uani d . 1 . . O O2 0.08783(6) -1.0025(3) 0.24125(7) 0.0324(3) Uani d . 1 . . O O3 0.33339(8) 0.0004(2) 0.11387(8) 0.0366(3) Uani d . 1 . . O O4 0.09680(7) -0.6081(3) 0.10486(7) 0.0350(3) Uani d . 1 . . O O5 0.39331(6) -0.8340(2) 0.44430(7) 0.0268(3) Uani d . 1 . . O C1 0.33592(11) -0.1792(3) 0.17207(10) 0.0288(3) Uani d . 1 . . C C2 0.41263(10) -0.2493(3) 0.25869(11) 0.0283(3) Uani d . 1 . . C C3 0.40727(9) -0.4432(3) 0.31994(10) 0.0249(3) Uani d . 1 . . C C4 0.32509(9) -0.5916(3) 0.30127(9) 0.0231(3) Uani d . 1 . . C C5 0.31677(9) -0.7921(3) 0.36502(9) 0.0231(3) Uani d . 1 . . C C6 0.23412(9) -0.9258(3) 0.34167(9) 0.0239(3) Uani d . 1 . . C C7 0.16400(9) -0.8570(3) 0.25405(10) 0.0268(3) Uani d . 1 . . C C8 0.16904(9) -0.6663(3) 0.18827(10) 0.0271(3) Uani d . 1 . . C C9 0.25149(9) -0.5312(3) 0.21538(10) 0.0248(3) Uani d . 1 . . C C10 0.19474(10) -1.1281(4) 0.38392(11) 0.0289(3) Uani d . 1 . . C C11 0.10984(10) -1.1639(4) 0.32247(11) 0.0336(4) Uani d . 1 . . C C12 0.39212(10) -1.0369(4) 0.51305(10) 0.0271(3) Uani d . 1 . . C C13 0.09892(11) -0.7760(4) 0.02912(11) 0.0371(4) Uani d . 1 . . C H12A 0.3524(14) -0.951(5) 0.5385(13) 0.056 Uiso d . 1 . . H H12B 0.4561(14) -1.050(5) 0.5612(13) 0.056 Uiso d . 1 . . H H12C 0.3734(13) -1.249(5) 0.4877(13) 0.056 Uiso d . 1 . . H H13A 0.1549(14) -0.721(5) 0.0262(13) 0.056 Uiso d . 1 . . H H13B 0.0463(14) -0.713(5) -0.0271(14) 0.056 Uiso d . 1 . . H H13C 0.0966(13) -1.003(6) 0.0418(13) 0.056 Uiso d . 1 . . H H3 0.4575(11) -0.486(4) 0.3790(11) 0.028(4) Uiso d . 1 . . H H2 0.4666(12) -0.144(4) 0.2690(11) 0.034(4) Uiso d . 1 . . H H11 0.0613(11) -1.279(4) 0.3229(11) 0.032(4) Uiso d . 1 . . H H10 0.2229(11) -1.225(4) 0.4447(12) 0.035(4) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0350(6) 0.0248(5) 0.0288(5) 0.0057(4) 0.0159(5) 0.0061(4) O2 0.0219(5) 0.0350(6) 0.0388(6) -0.0003(4) 0.0127(4) 0.0017(5) O3 0.0556(7) 0.0274(6) 0.0362(6) 0.0048(5) 0.0292(5) 0.0063(5) O4 0.0284(5) 0.0386(6) 0.0300(6) 0.0096(5) 0.0065(4) 0.0029(5) O5 0.0241(5) 0.0284(6) 0.0247(5) -0.0007(4) 0.0084(4) 0.0040(4) C1 0.0405(8) 0.0210(7) 0.0331(8) 0.0032(6) 0.0239(7) -0.0006(6) C2 0.0334(8) 0.0228(7) 0.0352(8) -0.0001(6) 0.0213(7) -0.0009(6) C3 0.0266(7) 0.0213(7) 0.0290(7) 0.0032(6) 0.0146(6) -0.0012(6) C4 0.0250(7) 0.0204(7) 0.0255(7) 0.0041(5) 0.0129(6) 0.0005(6) C5 0.0224(6) 0.0206(7) 0.0256(7) 0.0036(5) 0.0105(6) -0.0010(6) C6 0.0241(7) 0.0208(7) 0.0278(7) 0.0036(6) 0.0126(6) 0.0004(6) C7 0.0222(7) 0.0250(7) 0.0338(8) 0.0025(6) 0.0134(6) -0.0018(6) C8 0.0241(7) 0.0278(8) 0.0256(7) 0.0081(6) 0.0082(6) 0.0023(6) C9 0.0304(7) 0.0209(7) 0.0260(7) 0.0059(6) 0.0155(6) 0.0026(6) C10 0.0292(7) 0.0272(8) 0.0337(8) -0.0004(6) 0.0173(6) 0.0013(6) C11 0.0289(7) 0.0354(9) 0.0398(8) -0.0015(7) 0.0186(7) 0.0019(7) C12 0.0314(8) 0.0244(7) 0.0248(7) 0.0012(6) 0.0122(6) 0.0029(6) C13 0.0330(9) 0.0427(10) 0.0291(8) 0.0024(8) 0.0085(7) 0.0015(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C9 . 1.3781(17) ? O1 C1 . 1.3789(19) ? O2 C7 . 1.3658(17) ? O2 C11 . 1.3888(19) ? O3 C1 . 1.2145(18) ? O4 C8 . 1.3721(17) ? O4 C13 . 1.447(2) ? O5 C5 . 1.3590(16) ? O5 C12 . 1.4336(17) ? C1 C2 . 1.446(2) ? C2 C3 . 1.341(2) ? C2 H2 . 0.966(18) ? C3 C4 . 1.436(2) ? C3 H3 . 0.967(16) ? C4 C9 . 1.4072(19) ? C4 C5 . 1.412(2) ? C5 C6 . 1.3993(19) ? C6 C7 . 1.4078(19) ? C6 C10 . 1.455(2) ? C7 C8 . 1.388(2) ? C8 C9 . 1.389(2) ? C10 C11 . 1.333(2) ? C10 H10 . 0.976(18) ? C11 H11 . 0.966(18) ? C12 H12A . 1.01(2) ? C12 H12B . 1.01(2) ? C12 H12C . 1.00(2) ? C13 H13A . 1.00(2) ? C13 H13B . 0.98(2) ? C13 H13C . 1.02(2) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C9 O1 C1 122.16(11) C7 O2 C11 105.49(11) C8 O4 C13 112.89(11) C5 O5 C12 118.37(11) O3 C1 O1 116.64(14) O3 C1 C2 126.23(14) O1 C1 C2 117.13(12) C3 C2 C1 121.37(14) C3 C2 H2 123.4(10) C1 C2 H2 115.2(10) C2 C3 C4 121.06(14) C2 C3 H3 122.2(10) C4 C3 H3 116.7(10) C9 C4 C5 120.26(13) C9 C4 C3 117.27(13) C5 C4 C3 122.48(13) O5 C5 C6 127.08(12) O5 C5 C4 114.05(12) C6 C5 C4 118.87(12) C5 C6 C7 117.50(13) C5 C6 C10 137.99(13) C7 C6 C10 104.50(12) O2 C7 C8 123.24(13) O2 C7 C6 110.85(12) C8 C7 C6 125.91(13) O4 C8 C7 122.09(13) O4 C8 C9 123.19(13) C7 C8 C9 114.68(13) O1 C9 C8 116.35(12) O1 C9 C4 120.91(13) C8 C9 C4 122.74(13) C11 C10 C6 106.74(14) C11 C10 H10 124.6(10) C6 C10 H10 128.7(10) C10 C11 O2 112.42(14) C10 C11 H11 133.3(10) O2 C11 H11 114.3(10) O5 C12 H12A 109.8(12) O5 C12 H12B 104.3(12) H12A C12 H12B 112.6(16) O5 C12 H12C 111.4(11) H12A C12 H12C 111.6(17) H12B C12 H12C 106.9(17) O4 C13 H13A 108.2(12) O4 C13 H13B 106.6(12) H13A C13 H13B 111.5(16) O4 C13 H13C 107.7(11) H13A C13 H13C 111.6(17) H13B C13 H13C 111.1(17) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA C12 H12B O5 3_636 1.01(2) 2.64(2) 3.4200(10) 134.2(14) C13 H13B O4 3_545 0.98(2) 2.58(2) 3.455(2) 149.4(16) C12 H12A O3 4_556 1.01(2) 2.41(2) 3.2640(10) 141.3(16) C12 H12C O3 4_546 1.00(2) 2.67(2) 3.0430(10) 102.0(13) C11 H11 O2 2_545 0.960(10) 2.450(10) 3.3600(10) 156.7(13) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C9 O1 C1 O3 -177.04(12) C9 O1 C1 C2 3.43(19) O3 C1 C2 C3 177.32(14) O1 C1 C2 C3 -3.2(2) C1 C2 C3 C4 0.7(2) C2 C3 C4 C9 1.7(2) C2 C3 C4 C5 -178.70(13) C12 O5 C5 C6 0.3(2) C12 O5 C5 C4 -179.20(11) C9 C4 C5 O5 178.82(12) C3 C4 C5 O5 -0.82(19) C9 C4 C5 C6 -0.8(2) C3 C4 C5 C6 179.60(12) O5 C5 C6 C7 -178.03(13) C4 C5 C6 C7 1.49(19) O5 C5 C6 C10 3.0(3) C4 C5 C6 C10 -177.52(16) C11 O2 C7 C8 -178.94(14) C11 O2 C7 C6 0.55(15) C5 C6 C7 O2 -179.81(12) C10 C6 C7 O2 -0.50(15) C5 C6 C7 C8 -0.3(2) C10 C6 C7 C8 178.98(14) C13 O4 C8 C7 -103.24(16) C13 O4 C8 C9 79.52(18) O2 C7 C8 O4 0.4(2) C6 C7 C8 O4 -179.00(13) O2 C7 C8 C9 177.88(12) C6 C7 C8 C9 -1.5(2) C1 O1 C9 C8 178.98(12) C1 O1 C9 C4 -1.16(19) O4 C8 C9 O1 -0.4(2) C7 C8 C9 O1 -177.84(12) O4 C8 C9 C4 179.73(12) C7 C8 C9 C4 2.3(2) C5 C4 C9 O1 178.89(12) C3 C4 C9 O1 -1.45(19) C5 C4 C9 C8 -1.3(2) C3 C4 C9 C8 178.39(13) C5 C6 C10 C11 179.33(17) C7 C6 C10 C11 0.24(16) C6 C10 C11 O2 0.09(18) C7 O2 C11 C10 -0.40(17) O1 O2 O4 O5 2.02(5) O2 O4 O5 C1 -177.46(5) O4 O5 C1 C2 -177.19(11) O5 C1 C2 C3 0.57(9) C1 C2 C3 C4 0.7(2) C2 C3 C4 C5 -178.70(13) C3 C4 C5 C6 179.60(12) C4 C5 C6 C7 1.49(19) C5 C6 C7 C8 -0.3(2) C6 C7 C8 C9 -1.5(2) C7 C8 C9 C10 -0.14(9) C8 C9 C10 C11 -1.91(12) C9 C10 C11 C12 27.4(17) _cod_database_fobs_code 2202274 _journal_paper_doi 10.1107/S1600536803019925