#------------------------------------------------------------------------------ #$Date: 2012-02-03 17:16:24 +0000 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/22/2202278.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202278 loop_ _publ_author_name 'Yu-Hong Xue' 'Yu Liu' 'Duan-Jun Xu' _publ_section_title catena-Poly[[diaquabis(1H-benzimidazole-\kN^3^)cobalt(II)]-\m-succinato-\kO] _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m944 _journal_page_last m946 _journal_volume 59 _journal_year 2003 _chemical_formula_moiety 'C18 H20 Co N4 O6' _chemical_formula_sum 'C18 H20 Co N4 O6' _chemical_formula_weight 447.31 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 100.699(7) _cell_angle_beta 112.489(9) _cell_angle_gamma 104.780(6) _cell_formula_units_Z 1 _cell_length_a 7.0717(9) _cell_length_b 8.6326(11) _cell_length_c 8.8223(12) _cell_measurement_reflns_used 2067 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 25.0 _cell_measurement_theta_min 2.5 _cell_volume 456.33(11) _computing_cell_refinement PROCESS-AUTO _computing_data_collection 'PROCESS-AUTO (Rigaku Corporation, 1998)' _computing_data_reduction 'CrystalStructure (Rigaku/MSC and Rigaku Corporation, 2002)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR-92 (Altomare et al., 1993)' _diffrn_ambient_temperature 295(2) _diffrn_detector_area_resol_mean 10.00 _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device_type 'Rigaku RAXIS-RAPID' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0146 _diffrn_reflns_av_sigmaI/netI 0.0143 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 4322 _diffrn_reflns_theta_full 27.5 _diffrn_reflns_theta_max 27.5 _diffrn_reflns_theta_min 2.5 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.987 _exptl_absorpt_correction_T_max 0.940 _exptl_absorpt_correction_T_min 0.756 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'ABSCOR (Higashi, 1995)' _exptl_crystal_colour pink _exptl_crystal_density_diffrn 1.628 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 231 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.06 _refine_diff_density_max 0.28 _refine_diff_density_min -0.24 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.090 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 133 _refine_ls_number_reflns 2074 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.090 _refine_ls_R_factor_all 0.030 _refine_ls_R_factor_gt 0.027 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.033P)^2^+0.2062P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.065 _refine_ls_wR_factor_ref 0.067 _reflns_number_gt 1951 _reflns_number_total 2074 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ac6059.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2202278 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Co 0.5000 0.5000 0.5000 0.01885(9) Uani d S 1 . . Co O1 0.25441(18) 0.26566(13) 0.42313(14) 0.0248(2) Uani d . 1 . . O O2 0.09420(19) 0.32133(14) 0.59118(15) 0.0285(2) Uani d . 1 . . O O3 0.69480(19) 0.37887(14) 0.42624(15) 0.0286(2) Uani d . 1 . . O N1 0.2331(2) 0.43888(18) -0.04259(18) 0.0298(3) Uani d . 1 . . N H1 0.1854 0.3764 -0.1471 0.036 Uiso calc R 1 . . H N3 0.3682(2) 0.51426(16) 0.24386(16) 0.0246(3) Uani d . 1 . . N C2 0.3049(3) 0.3929(2) 0.1009(2) 0.0288(3) Uani d . 1 . . C H2 0.3093 0.2858 0.0989 0.035 Uiso calc R 1 . . H C4 0.3723(3) 0.8140(2) 0.2843(2) 0.0291(3) Uani d . 1 . . C H4 0.4283 0.8466 0.4041 0.035 Uiso calc R 1 . . H C5 0.3224(3) 0.9251(2) 0.1942(2) 0.0374(4) Uani d . 1 . . C H5 0.3470 1.0345 0.2546 0.045 Uiso calc R 1 . . H C6 0.2355(4) 0.8755(3) 0.0135(3) 0.0439(5) Uani d . 1 . . C H6 0.2027 0.9528 -0.0433 0.053 Uiso calc R 1 . . H C7 0.1973(3) 0.7155(3) -0.0821(2) 0.0385(4) Uani d . 1 . . C H7 0.1389 0.6828 -0.2020 0.046 Uiso calc R 1 . . H C8 0.2501(3) 0.6049(2) 0.0093(2) 0.0261(3) Uani d . 1 . . C C9 0.3358(2) 0.65176(19) 0.18982(19) 0.0225(3) Uani d . 1 . . C C11 0.1238(2) 0.22120(18) 0.48490(19) 0.0219(3) Uani d . 1 . . C C12 -0.0113(3) 0.0345(2) 0.4250(2) 0.0304(4) Uani d . 1 . . C H12A 0.0349 -0.0277 0.3512 0.036 Uiso calc R 1 . . H H12B -0.1644 0.0169 0.3567 0.036 Uiso calc R 1 . . H H31 0.8067 0.3548 0.4950 0.050 Uiso d . 1 . . H H32 0.7643 0.4654 0.4072 0.050 Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Co 0.02170(15) 0.01563(14) 0.02000(15) 0.00553(10) 0.01049(11) 0.00669(10) O1 0.0279(6) 0.0193(5) 0.0263(6) 0.0039(4) 0.0144(4) 0.0068(4) O2 0.0346(6) 0.0238(6) 0.0320(6) 0.0089(5) 0.0204(5) 0.0098(5) O3 0.0316(6) 0.0263(6) 0.0358(6) 0.0133(5) 0.0198(5) 0.0133(5) N1 0.0359(7) 0.0300(7) 0.0203(6) 0.0126(6) 0.0110(6) 0.0042(5) N3 0.0282(7) 0.0209(6) 0.0224(6) 0.0072(5) 0.0099(5) 0.0076(5) C2 0.0325(8) 0.0243(8) 0.0269(8) 0.0099(6) 0.0115(7) 0.0068(6) C4 0.0357(9) 0.0265(8) 0.0239(8) 0.0110(7) 0.0126(7) 0.0075(6) C5 0.0509(11) 0.0271(8) 0.0378(10) 0.0178(8) 0.0204(8) 0.0123(7) C6 0.0671(13) 0.0419(11) 0.0396(10) 0.0322(10) 0.0268(10) 0.0261(9) C7 0.0540(11) 0.0477(11) 0.0254(8) 0.0286(9) 0.0195(8) 0.0191(8) C8 0.0286(8) 0.0302(8) 0.0225(7) 0.0126(6) 0.0129(6) 0.0088(6) C9 0.0224(7) 0.0240(7) 0.0218(7) 0.0080(6) 0.0101(6) 0.0091(6) C11 0.0241(7) 0.0198(7) 0.0196(7) 0.0063(6) 0.0076(6) 0.0088(6) C12 0.0378(9) 0.0208(7) 0.0262(8) 0.0008(6) 0.0144(7) 0.0075(6) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Co O1 . 2.0894(11) y Co N3 . 2.1309(13) y Co O3 . 2.1407(11) y O1 C11 . 1.2568(18) y O2 C11 . 1.2695(19) y O3 H31 . 0.895 ? O3 H32 . 0.866 ? N1 C2 . 1.347(2) ? N1 C8 . 1.380(2) ? N1 H1 . 0.86 ? N3 C2 . 1.315(2) ? N3 C9 . 1.3979(19) ? C2 H2 . 0.93 ? C4 C5 . 1.385(2) ? C4 C9 . 1.393(2) ? C4 H4 . 0.93 ? C5 C6 . 1.402(3) ? C5 H5 . 0.93 ? C6 C7 . 1.377(3) ? C6 H6 . 0.93 ? C7 C8 . 1.392(2) ? C7 H7 . 0.93 ? C8 C9 . 1.402(2) ? C11 C12 . 1.517(2) y C12 C12 2_556 1.521(3) y C12 H12A . 0.97 ? C12 H12B . 0.97 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Co N3 . . 91.30(5) y O1 Co O3 . . 90.50(4) y N3 Co O3 . . 86.21(5) y C11 O1 Co . . 128.74(10) ? Co O3 H31 . . 127.52 ? Co O3 H32 . . 94.40 ? H31 O3 H32 . . 100.91 ? C2 N1 C8 . . 107.30(13) ? C2 N1 H1 . . 126.3 ? C8 N1 H1 . . 126.3 ? C2 N3 C9 . . 104.90(13) ? C2 N3 Co . . 126.25(11) ? C9 N3 Co . . 128.82(10) ? N3 C2 N1 . . 113.35(15) ? N3 C2 H2 . . 123.3 ? N1 C2 H2 . . 123.3 ? C5 C4 C9 . . 117.86(15) ? C5 C4 H4 . . 121.1 ? C9 C4 H4 . . 121.1 ? C4 C5 C6 . . 121.13(17) ? C4 C5 H5 . . 119.4 ? C6 C5 H5 . . 119.4 ? C7 C6 C5 . . 121.83(17) ? C7 C6 H6 . . 119.1 ? C5 C6 H6 . . 119.1 ? C6 C7 C8 . . 116.81(16) ? C6 C7 H7 . . 121.6 ? C8 C7 H7 . . 121.6 ? N1 C8 C7 . . 132.49(16) ? N1 C8 C9 . . 105.28(14) ? C7 C8 C9 . . 122.23(16) ? C4 C9 N3 . . 130.70(14) ? C4 C9 C8 . . 120.13(14) ? N3 C9 C8 . . 109.16(13) ? O1 C11 O2 . . 124.77(13) ? O1 C11 C12 . . 117.41(13) ? O2 C11 C12 . . 117.81(13) ? C11 C12 C12 . 2_556 112.50(17) ? C11 C12 H12A . . 109.1 ? C12 C12 H12A 2_556 . 109.1 ? C11 C12 H12B . . 109.1 ? C12 C12 H12B 2_556 . 109.1 ? H12A C12 H12B . . 107.8 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H32 O2 2_666 0.87 1.85 2.7020(18) 167 y N1 H1 O2 1_554 0.86 2.07 2.8775(19) 157 y O3 H31 O2 1_655 0.89 2.00 2.860(2) 160 y