#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2202602.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2202602 loop_ _publ_author_name 'Sakai, Ken' 'Okamoto, Ken' 'Takahashi, Satoru' 'Yokokawa, Kazuo' _publ_section_title ; N-Methyl-N'-(3-phthalimidopropyl)-4,4'-bipyridinium diiodide ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o917 _journal_page_last o918 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac 'C22 H21 N3 O2 2+, 2I 1-' _chemical_formula_moiety 'C22 H21 N3 O2 2+, 2I 1-' _chemical_formula_sum 'C22 H21 I2 N3 O2' _chemical_formula_weight 613.22 _chemical_name_systematic ; N-Methyl-N'-(3-phthalimidopropyl)-4,4'-bipyridinium diiodide ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 83.7150(10) _cell_angle_beta 88.570(2) _cell_angle_gamma 82.2230(10) _cell_formula_units_Z 2 _cell_length_a 6.0535(5) _cell_length_b 7.4674(6) _cell_length_c 25.776(2) _cell_measurement_reflns_used 3414 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 27.17 _cell_measurement_theta_min 2.77 _cell_volume 1147.46(16) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT _computing_molecular_graphics 'KENX (Sakai, 2002)' _computing_publication_material ; SHELXL97 (Sheldrick, 1997), TEXSAN (Molecular Structure Corporation, 2001), KENX (Sakai, 2002) and ORTEPII (Johnson, 1976) ; _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 296(2) _diffrn_detector_area_resol_mean 8.366 _diffrn_measured_fraction_theta_full 0.925 _diffrn_measured_fraction_theta_max 0.925 _diffrn_measurement_device 'Bruker SMART APEX CCD-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0189 _diffrn_reflns_av_sigmaI/netI 0.0381 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 33 _diffrn_reflns_limit_l_min -24 _diffrn_reflns_number 6983 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.38 _diffrn_standards_decay_% 0.265 _diffrn_standards_interval_time 330 _diffrn_standards_number 134 _exptl_absorpt_coefficient_mu 2.763 _exptl_absorpt_correction_T_max 0.871 _exptl_absorpt_correction_T_min 0.586 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.775 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 592 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.05 _refine_diff_density_max 1.267 _refine_diff_density_min -0.443 _refine_ls_extinction_expression not_refined _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.049 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 263 _refine_ls_number_reflns 4883 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.049 _refine_ls_R_factor_all 0.0499 _refine_ls_R_factor_gt 0.0408 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.048P)^2^+0.5905P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0968 _refine_ls_wR_factor_ref 0.1017 _reflns_number_gt 4060 _reflns_number_total 4883 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file dn6076.cif _[local]_cod_data_source_block I _cod_original_cell_volume 1147.45(16) _cod_database_code 2202602 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol I1 0.19500(5) 0.72933(4) 0.254201(15) 0.06628(13) Uani d . 1 I I2 0.84565(5) 0.74396(4) 0.065322(12) 0.05327(11) Uani d . 1 I O1 0.4876(5) 0.2479(5) 0.44316(13) 0.0672(9) Uani d . 1 O O2 -0.1257(6) 0.3202(5) 0.34073(14) 0.0749(10) Uani d . 1 O N1 0.1978(6) 0.2446(5) 0.38681(13) 0.0492(8) Uani d . 1 N N2 0.5727(5) 0.2105(4) 0.24093(12) 0.0377(7) Uani d . 1 N N3 1.4807(5) 0.2657(4) 0.06983(12) 0.0398(7) Uani d . 1 N C1 0.3138(7) 0.3200(6) 0.42332(16) 0.0499(10) Uani d . 1 C C2 0.1766(7) 0.4947(6) 0.43191(16) 0.0489(10) Uani d . 1 C C3 0.2117(8) 0.6203(6) 0.46498(18) 0.0586(11) Uani d . 1 C H3 0.3390 0.6064 0.4853 0.070 Uiso calc R 1 H C4 0.0484(10) 0.7685(7) 0.4666(2) 0.0697(14) Uani d . 1 C H4 0.0648 0.8558 0.4889 0.084 Uiso calc R 1 H C5 -0.1378(10) 0.7887(8) 0.4359(2) 0.0776(16) Uani d . 1 C H5 -0.2434 0.8909 0.4373 0.093 Uiso calc R 1 H C6 -0.1721(9) 0.6599(8) 0.4028(2) 0.0715(14) Uani d . 1 C H6 -0.2990 0.6727 0.3824 0.086 Uiso calc R 1 H C7 -0.0104(7) 0.5141(6) 0.40176(17) 0.0527(10) Uani d . 1 C C8 0.0021(7) 0.3550(7) 0.37156(17) 0.0552(11) Uani d . 1 C C9 0.2768(8) 0.0703(6) 0.36789(16) 0.0530(11) Uani d . 1 C H9A 0.1530 0.0257 0.3525 0.064 Uiso calc R 1 H H9B 0.3287 -0.0163 0.3973 0.064 Uiso calc R 1 H C10 0.4626(7) 0.0793(5) 0.32801(15) 0.0465(9) Uani d . 1 C H10A 0.5837 0.1301 0.3425 0.056 Uiso calc R 1 H H10B 0.5191 -0.0427 0.3201 0.056 Uiso calc R 1 H C11 0.3849(6) 0.1939(5) 0.27838(15) 0.0434(9) Uani d . 1 C H11A 0.2703 0.1391 0.2626 0.052 Uiso calc R 1 H H11B 0.3203 0.3139 0.2864 0.052 Uiso calc R 1 H C12 0.6752(7) 0.3591(5) 0.23621(15) 0.0433(9) Uani d . 1 C H12 0.6250 0.4538 0.2560 0.052 Uiso calc R 1 H C13 0.8524(6) 0.3747(5) 0.20284(16) 0.0420(9) Uani d . 1 C H13 0.9205 0.4798 0.1997 0.050 Uiso calc R 1 H C14 0.9306(6) 0.2327(5) 0.17358(14) 0.0345(7) Uani d . 1 C C15 0.8192(6) 0.0811(5) 0.17903(15) 0.0420(9) Uani d . 1 C H15 0.8659 -0.0154 0.1597 0.050 Uiso calc R 1 H C16 0.6415(7) 0.0722(5) 0.21254(16) 0.0453(9) Uani d . 1 C H16 0.5679 -0.0300 0.2157 0.054 Uiso calc R 1 H C17 1.3702(7) 0.1209(6) 0.07274(17) 0.0503(10) Uani d . 1 C H17 1.4133 0.0294 0.0514 0.060 Uiso calc R 1 H C18 1.1957(7) 0.1061(5) 0.10658(17) 0.0478(10) Uani d . 1 C H18 1.1224 0.0037 0.1086 0.057 Uiso calc R 1 H C19 1.1264(6) 0.2432(5) 0.13816(14) 0.0361(8) Uani d . 1 C C20 1.2465(7) 0.3901(5) 0.13447(15) 0.0425(9) Uani d . 1 C H20 1.2072 0.4838 0.1553 0.051 Uiso calc R 1 H C21 1.4225(6) 0.3974(5) 0.10025(15) 0.0417(9) Uani d . 1 C H21 1.5025 0.4958 0.0983 0.050 Uiso calc R 1 H C22 1.6680(7) 0.2759(6) 0.03166(17) 0.0495(10) Uani d . 1 C H22A 1.6097 0.3005 -0.0031 0.074 Uiso calc R 1 H H22B 1.7645 0.1622 0.0347 0.074 Uiso calc R 1 H H22C 1.7506 0.3714 0.0387 0.074 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 I1 0.0654(2) 0.03703(17) 0.1002(3) -0.01153(14) -0.01225(18) -0.01576(15) I2 0.05358(18) 0.03899(16) 0.0708(2) -0.01621(12) -0.00222(14) -0.00893(13) O1 0.062(2) 0.074(2) 0.066(2) 0.0056(17) -0.0165(17) -0.0240(17) O2 0.066(2) 0.090(3) 0.075(2) -0.0285(19) -0.0166(18) -0.0111(19) N1 0.052(2) 0.056(2) 0.0440(19) -0.0184(17) -0.0002(16) -0.0115(16) N2 0.0386(16) 0.0334(16) 0.0407(17) -0.0050(13) 0.0008(13) -0.0016(13) N3 0.0373(16) 0.0357(16) 0.0467(18) -0.0064(13) -0.0003(14) -0.0041(13) C1 0.054(2) 0.058(3) 0.041(2) -0.014(2) 0.0009(19) -0.0103(18) C2 0.053(2) 0.051(2) 0.043(2) -0.0112(19) 0.0062(19) -0.0053(18) C3 0.068(3) 0.054(3) 0.055(3) -0.009(2) 0.003(2) -0.010(2) C4 0.094(4) 0.051(3) 0.063(3) -0.009(3) 0.011(3) -0.007(2) C5 0.081(4) 0.064(3) 0.080(4) 0.006(3) 0.019(3) 0.004(3) C6 0.062(3) 0.081(4) 0.065(3) -0.003(3) -0.002(2) 0.011(3) C7 0.051(2) 0.057(3) 0.050(2) -0.011(2) 0.0036(19) 0.002(2) C8 0.052(3) 0.070(3) 0.047(2) -0.025(2) 0.000(2) -0.001(2) C9 0.068(3) 0.052(2) 0.044(2) -0.026(2) 0.001(2) -0.0043(18) C10 0.052(2) 0.041(2) 0.049(2) -0.0124(18) -0.0018(19) -0.0051(17) C11 0.043(2) 0.040(2) 0.048(2) -0.0071(17) 0.0019(17) -0.0038(16) C12 0.049(2) 0.037(2) 0.045(2) -0.0068(17) -0.0011(18) -0.0115(16) C13 0.042(2) 0.0325(18) 0.055(2) -0.0131(16) 0.0019(17) -0.0110(16) C14 0.0359(18) 0.0293(17) 0.0384(19) -0.0046(14) -0.0029(15) -0.0033(14) C15 0.046(2) 0.0301(18) 0.050(2) -0.0065(16) 0.0041(18) -0.0079(16) C16 0.054(2) 0.0302(18) 0.053(2) -0.0114(17) 0.0057(19) -0.0052(16) C17 0.047(2) 0.045(2) 0.065(3) -0.0169(18) 0.009(2) -0.0222(19) C18 0.049(2) 0.039(2) 0.062(3) -0.0173(18) 0.007(2) -0.0207(18) C19 0.0368(18) 0.0293(17) 0.042(2) -0.0052(14) -0.0060(15) -0.0023(14) C20 0.051(2) 0.0305(18) 0.048(2) -0.0105(16) 0.0002(18) -0.0067(15) C21 0.046(2) 0.0293(18) 0.051(2) -0.0118(16) -0.0008(18) -0.0027(16) C22 0.045(2) 0.048(2) 0.057(3) -0.0128(18) 0.0096(19) -0.0081(19) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C8 N1 C1 111.9(4) C8 N1 C9 125.2(4) C1 N1 C9 122.9(4) C12 N2 C16 120.5(3) C12 N2 C11 120.5(3) C16 N2 C11 119.1(3) C21 N3 C17 120.5(3) C21 N3 C22 121.0(3) C17 N3 C22 118.5(3) O1 C1 N1 124.3(4) O1 C1 C2 130.2(4) N1 C1 C2 105.5(4) C7 C2 C3 122.1(5) C7 C2 C1 108.4(4) C3 C2 C1 129.5(4) C2 C3 C4 116.8(5) C2 C3 H3 121.6 C4 C3 H3 121.6 C5 C4 C3 121.0(5) C5 C4 H4 119.5 C3 C4 H4 119.5 C4 C5 C6 121.6(5) C4 C5 H5 119.2 C6 C5 H5 119.2 C7 C6 C5 116.7(5) C7 C6 H6 121.7 C5 C6 H6 121.7 C6 C7 C2 121.8(5) C6 C7 C8 129.9(5) C2 C7 C8 108.3(4) O2 C8 N1 124.5(5) O2 C8 C7 129.6(5) N1 C8 C7 105.8(4) N1 C9 C10 113.5(3) N1 C9 H9A 108.9 C10 C9 H9A 108.9 N1 C9 H9B 108.9 C10 C9 H9B 108.9 H9A C9 H9B 107.7 C11 C10 C9 111.7(3) C11 C10 H10A 109.3 C9 C10 H10A 109.3 C11 C10 H10B 109.3 C9 C10 H10B 109.3 H10A C10 H10B 107.9 N2 C11 C10 110.9(3) N2 C11 H11A 109.5 C10 C11 H11A 109.5 N2 C11 H11B 109.5 C10 C11 H11B 109.5 H11A C11 H11B 108.0 N2 C12 C13 121.2(3) N2 C12 H12 119.4 C13 C12 H12 119.4 C12 C13 C14 119.8(3) C12 C13 H13 120.1 C14 C13 H13 120.1 C15 C14 C13 117.5(3) C15 C14 C19 121.4(3) C13 C14 C19 121.1(3) C16 C15 C14 120.7(3) C16 C15 H15 119.7 C14 C15 H15 119.7 N2 C16 C15 120.3(3) N2 C16 H16 119.8 C15 C16 H16 119.8 N3 C17 C18 120.9(4) N3 C17 H17 119.6 C18 C17 H17 119.6 C17 C18 C19 120.3(4) C17 C18 H18 119.8 C19 C18 H18 119.8 C20 C19 C18 117.2(3) C20 C19 C14 121.9(3) C18 C19 C14 120.9(3) C21 C20 C19 120.2(4) C21 C20 H20 119.9 C19 C20 H20 119.9 N3 C21 C20 121.0(3) N3 C21 H21 119.5 C20 C21 H21 119.5 N3 C22 H22A 109.5 N3 C22 H22B 109.5 H22A C22 H22B 109.5 N3 C22 H22C 109.5 H22A C22 H22C 109.5 H22B C22 H22C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.213(5) O2 C8 1.195(5) N1 C8 1.387(6) N1 C1 1.397(5) N1 C9 1.456(5) N2 C12 1.336(5) N2 C16 1.345(5) N2 C11 1.482(5) N3 C21 1.329(5) N3 C17 1.341(5) N3 C22 1.486(5) C1 C2 1.483(6) C2 C7 1.372(6) C2 C3 1.375(6) C3 C4 1.384(7) C3 H3 0.9300 C4 C5 1.375(8) C4 H4 0.9300 C5 C6 1.393(8) C5 H5 0.9300 C6 C7 1.364(7) C6 H6 0.9300 C7 C8 1.483(6) C9 C10 1.508(5) C9 H9A 0.9700 C9 H9B 0.9700 C10 C11 1.507(5) C10 H10A 0.9700 C10 H10B 0.9700 C11 H11A 0.9700 C11 H11B 0.9700 C12 C13 1.367(5) C12 H12 0.9300 C13 C14 1.392(5) C13 H13 0.9300 C14 C15 1.386(5) C14 C19 1.483(5) C15 C16 1.367(5) C15 H15 0.9300 C16 H16 0.9300 C17 C18 1.362(6) C17 H17 0.9300 C18 C19 1.392(5) C18 H18 0.9300 C19 C20 1.389(5) C20 C21 1.369(5) C20 H20 0.9300 C21 H21 0.9300 C22 H22A 0.9600 C22 H22B 0.9600 C22 H22C 0.9600 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C8 N1 C1 O1 178.8(4) C9 N1 C1 O1 -1.1(7) C8 N1 C1 C2 0.2(5) C9 N1 C1 C2 -179.6(3) O1 C1 C2 C7 -177.6(5) N1 C1 C2 C7 0.8(5) O1 C1 C2 C3 -0.2(8) N1 C1 C2 C3 178.2(4) C7 C2 C3 C4 0.1(7) C1 C2 C3 C4 -177.0(4) C2 C3 C4 C5 -0.9(7) C3 C4 C5 C6 1.3(8) C4 C5 C6 C7 -0.9(8) C5 C6 C7 C2 0.2(7) C5 C6 C7 C8 179.4(4) C3 C2 C7 C6 0.2(7) C1 C2 C7 C6 177.9(4) C3 C2 C7 C8 -179.1(4) C1 C2 C7 C8 -1.5(5) C1 N1 C8 O2 180.0(4) C9 N1 C8 O2 -0.2(7) C1 N1 C8 C7 -1.1(5) C9 N1 C8 C7 178.7(3) C6 C7 C8 O2 1.1(8) C2 C7 C8 O2 -179.6(5) C6 C7 C8 N1 -177.7(4) C2 C7 C8 N1 1.6(5) C8 N1 C9 C10 103.0(5) C1 N1 C9 C10 -77.2(5) N1 C9 C10 C11 -65.6(5) C12 N2 C11 C10 -99.4(4) C16 N2 C11 C10 79.2(4) C9 C10 C11 N2 176.5(3) C16 N2 C12 C13 -0.3(6) C11 N2 C12 C13 178.3(4) N2 C12 C13 C14 -0.8(6) C12 C13 C14 C15 1.4(6) C12 C13 C14 C19 -178.3(4) C13 C14 C15 C16 -0.9(6) C19 C14 C15 C16 178.8(4) C12 N2 C16 C15 0.9(6) C11 N2 C16 C15 -177.8(4) C14 C15 C16 N2 -0.3(6) C21 N3 C17 C18 0.4(6) C22 N3 C17 C18 -179.2(4) N3 C17 C18 C19 1.2(7) C17 C18 C19 C20 -1.8(6) C17 C18 C19 C14 177.4(4) C15 C14 C19 C20 -176.5(3) C13 C14 C19 C20 3.2(6) C15 C14 C19 C18 4.3(6) C13 C14 C19 C18 -176.0(4) C18 C19 C20 C21 1.0(6) C14 C19 C20 C21 -178.2(4) C17 N3 C21 C20 -1.2(6) C22 N3 C21 C20 178.3(4) C19 C20 C21 N3 0.5(6)