#------------------------------------------------------------------------------ #$Date: 2011-09-28 15:24:46 +0100 (Wed, 28 Sep 2011) $ #$Revision: 26848 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/31/2203174.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203174 loop_ _publ_author_name 'Dilovan S. Cati' 'Helen Stoeckli-Evans' _publ_section_title ; An orthorhombic polymorph of N,N'-bis(2-pyridylmethyl)pyrazine-2,3-dicarboxamide ; _journal_issue 2 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o210 _journal_page_last o212 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C18 H16 N6 O2' _chemical_formula_moiety 'C18 H16 N6 O2' _chemical_formula_sum 'C18 H16 N6 O2' _chemical_formula_weight 348.37 _chemical_name_systematic ' ?' _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 8.5131(6) _cell_length_b 31.862(2) _cell_length_c 12.1757(6) _cell_measurement_reflns_used 15934 _cell_measurement_temperature 153 _cell_measurement_theta_max 25.61 _cell_measurement_theta_min 1.28 _cell_volume 3302.6(4) _computing_cell_refinement X-AREA _computing_data_collection 'X-AREA (Stoe & Cie, 2003)' _computing_data_reduction 'X-RED32 Stoe & Cie, 2003)' _computing_molecular_graphics 'PLATON (Spek, 1990)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 153 _diffrn_measured_fraction_theta_full 0.982 _diffrn_measured_fraction_theta_max 0.982 _diffrn_measurement_device_type 'Stoe IPDS-II' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0450 _diffrn_reflns_av_sigmaI/netI 0.0269 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 38 _diffrn_reflns_limit_k_min -38 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 18389 _diffrn_reflns_reduction_process ' ?' _diffrn_reflns_theta_full 25.53 _diffrn_reflns_theta_max 25.53 _diffrn_reflns_theta_min 1.28 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.097 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.401 _exptl_crystal_density_method 'Not Measured' _exptl_crystal_description block _exptl_crystal_F_000 1456 _exptl_crystal_size_max 0.500 _exptl_crystal_size_mid 0.500 _exptl_crystal_size_min 0.400 _refine_diff_density_max 0.171 _refine_diff_density_min -0.140 _refine_ls_extinction_coef 0.0087(9) _refine_ls_extinction_expression FC^*^=KFC[1+0.001XFC^2^\L^3^/SIN(2\Q)]^-1/4^ _refine_ls_extinction_method shelxl97 _refine_ls_goodness_of_fit_ref 1.033 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 300 _refine_ls_number_reflns 3034 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.033 _refine_ls_R_factor_all 0.0437 _refine_ls_R_factor_gt 0.0315 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0478P)^2^+0.1168P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0744 _refine_ls_wR_factor_ref 0.0785 _reflns_number_gt 2456 _reflns_number_total 3034 _reflns_threshold_expression I>2\s(I) _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2203174 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,-y,1/2+z 1/2+x,1/2-y,-z -x,1/2+y,1/2-z -x,-y,-z 1/2+x,y,1/2-z 1/2-x,1/2+y,z x,1/2-y,1/2+z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0301(5) 0.0389(5) 0.0304(5) 0.0065(4) -0.0037(4) -0.0014(4) O2 0.0300(5) 0.0349(4) 0.0336(5) -0.0025(4) 0.0040(4) 0.0027(4) N1 0.0278(6) 0.0318(5) 0.0352(6) 0.0033(4) -0.0035(5) -0.0004(4) N2 0.0395(7) 0.0370(6) 0.0275(6) 0.0030(5) -0.0036(5) -0.0007(4) N3 0.0264(6) 0.0393(6) 0.0297(6) 0.0019(5) -0.0001(5) -0.0068(4) N4 0.0409(7) 0.0341(5) 0.0428(7) -0.0011(5) 0.0080(6) -0.0040(5) N5 0.0251(6) 0.0287(5) 0.0303(6) 0.0034(4) 0.0033(5) -0.0007(4) N6 0.0266(6) 0.0317(5) 0.0290(6) 0.0011(4) 0.0016(5) -0.0004(4) C1 0.0256(6) 0.0240(5) 0.0297(7) -0.0005(4) 0.0002(5) 0.0010(4) C2 0.0301(7) 0.0250(5) 0.0265(7) -0.0010(5) -0.0005(5) 0.0008(4) C3 0.0404(8) 0.0402(7) 0.0311(8) 0.0030(6) -0.0094(7) 0.0007(5) C4 0.0332(8) 0.0379(7) 0.0378(8) 0.0047(6) -0.0093(6) 0.0007(5) C5 0.0255(6) 0.0255(5) 0.0285(7) -0.0026(5) 0.0006(5) 0.0003(4) C6 0.0332(7) 0.0445(7) 0.0257(7) -0.0062(6) 0.0051(6) -0.0047(5) C7 0.0262(7) 0.0358(6) 0.0300(7) 0.0060(5) -0.0004(6) -0.0042(5) C8 0.0429(9) 0.0441(7) 0.0329(8) 0.0091(6) -0.0017(7) -0.0075(6) C9 0.0636(11) 0.0402(7) 0.0483(10) 0.0137(7) -0.0163(9) -0.0153(7) C10 0.0543(10) 0.0300(7) 0.0661(11) 0.0038(6) -0.0142(9) -0.0062(7) C11 0.0486(9) 0.0338(7) 0.0610(11) -0.0017(6) 0.0050(8) 0.0003(7) C12 0.0301(7) 0.0307(6) 0.0207(6) 0.0022(5) 0.0023(5) -0.0028(4) C13 0.0296(7) 0.0324(6) 0.0272(7) 0.0050(5) 0.0003(5) 0.0001(5) C14 0.0235(6) 0.0298(6) 0.0246(6) 0.0038(5) -0.0018(5) 0.0021(4) C15 0.0336(7) 0.0295(6) 0.0390(8) -0.0005(5) 0.0051(6) -0.0002(5) C16 0.0301(7) 0.0424(7) 0.0356(8) -0.0026(6) 0.0082(6) 0.0040(5) C17 0.0264(7) 0.0409(6) 0.0259(7) 0.0066(5) -0.0001(5) -0.0018(5) C18 0.0287(7) 0.0329(6) 0.0299(7) 0.0009(5) 0.0006(6) -0.0040(5) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_type_symbol O1 0.48512(11) 0.11895(3) 0.67140(7) 0.0331(3) Uani 1.000 O O2 0.66545(11) 0.11705(3) 0.44520(8) 0.0328(3) Uani 1.000 O N1 0.15489(13) 0.14818(3) 0.51065(9) 0.0316(3) Uani 1.000 N N2 0.33433(14) 0.11150(3) 0.34397(9) 0.0347(4) Uani 1.000 N N3 0.27131(14) 0.15786(3) 0.71466(9) 0.0318(3) Uani 1.000 N N4 0.47626(15) 0.22332(3) 0.76079(11) 0.0393(4) Uani 1.000 N N5 0.55206(13) 0.05570(3) 0.49747(9) 0.0280(3) Uani 1.000 N N6 0.76169(13) -0.02198(3) 0.42001(9) 0.0291(3) Uani 1.000 N C1 0.29800(15) 0.13237(3) 0.53071(10) 0.0264(3) Uani 1.000 C C2 0.38618(15) 0.11353(3) 0.44781(10) 0.0272(4) Uani 1.000 C C3 0.19148(18) 0.12732(4) 0.32535(12) 0.0372(4) Uani 1.000 C C4 0.10223(17) 0.14503(4) 0.40816(12) 0.0363(4) Uani 1.000 C C5 0.36065(15) 0.13594(3) 0.64586(10) 0.0265(3) Uani 1.000 C C6 0.31589(17) 0.16569(4) 0.82746(11) 0.0345(4) Uani 1.000 C C7 0.39115(15) 0.20801(4) 0.84357(11) 0.0307(4) Uani 1.000 C C8 0.37539(19) 0.22895(4) 0.94271(12) 0.0400(5) Uani 1.000 C C9 0.4489(2) 0.26717(4) 0.95676(15) 0.0507(5) Uani 1.000 C C10 0.5344(2) 0.28365(4) 0.87083(15) 0.0501(5) Uani 1.000 C C11 0.5456(2) 0.26067(4) 0.77576(16) 0.0478(5) Uani 1.000 C C12 0.54885(15) 0.09581(4) 0.46547(10) 0.0272(4) Uani 1.000 C C13 0.70008(16) 0.03740(4) 0.53576(11) 0.0297(4) Uani 1.000 C C14 0.79668(15) 0.01783(3) 0.44534(10) 0.0260(3) Uani 1.000 C C15 0.91649(16) 0.03958(4) 0.39401(11) 0.0340(4) Uani 1.000 C C16 1.00657(17) 0.01966(4) 0.31531(12) 0.0360(4) Uani 1.000 C C17 0.97450(16) -0.02165(4) 0.29072(11) 0.0311(4) Uani 1.000 C C18 0.85102(15) -0.04081(4) 0.34334(11) 0.0305(4) Uani 1.000 C H3 0.157(2) 0.1258(5) 0.2487(16) 0.051(4) Uiso 1.000 H H3N 0.182(2) 0.1687(5) 0.6879(14) 0.051(5) Uiso 1.000 H H4 -0.002(2) 0.1566(5) 0.3932(13) 0.044(4) Uiso 1.000 H H5N 0.456(2) 0.0453(4) 0.5211(13) 0.042(4) Uiso 1.000 H H6A 0.221(2) 0.1630(4) 0.8713(13) 0.046(4) Uiso 1.000 H H6B 0.3944(19) 0.1431(4) 0.8504(12) 0.038(4) Uiso 1.000 H H8 0.313(2) 0.2173(5) 0.9989(15) 0.049(5) Uiso 1.000 H H9 0.442(2) 0.2812(6) 1.0290(16) 0.064(5) Uiso 1.000 H H10 0.592(2) 0.3114(5) 0.8761(14) 0.058(5) Uiso 1.000 H H11 0.608(2) 0.2717(5) 0.7115(15) 0.058(5) Uiso 1.000 H H13A 0.7658(19) 0.0597(4) 0.5710(12) 0.035(4) Uiso 1.000 H H13B 0.6723(17) 0.0151(4) 0.5890(12) 0.029(3) Uiso 1.000 H H15 0.9327(19) 0.0685(5) 0.4141(12) 0.038(4) Uiso 1.000 H H16 1.093(2) 0.0350(5) 0.2808(14) 0.048(4) Uiso 1.000 H H17 1.0368(19) -0.0376(4) 0.2376(13) 0.037(4) Uiso 1.000 H H18 0.8215(18) -0.0698(5) 0.3263(12) 0.038(4) Uiso 1.000 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 N1 C4 116.68(11) yes C2 N2 C3 116.20(11) yes C5 N3 C6 122.59(11) yes C7 N4 C11 117.46(13) yes C12 N5 C13 119.41(11) yes C14 N6 C18 117.17(11) yes C6 N3 H3N 120.1(11) no C5 N3 H3N 117.3(11) no C13 N5 H5N 121.2(9) no C12 N5 H5N 114.5(9) no C2 C1 C5 121.10(11) no N1 C1 C5 117.61(11) yes N1 C1 C2 121.28(11) yes N2 C2 C12 114.71(11) yes C1 C2 C12 123.47(11) no N2 C2 C1 121.76(11) yes N2 C3 C4 122.04(13) yes N1 C4 C3 121.99(13) yes O1 C5 N3 124.38(12) yes O1 C5 C1 120.52(11) yes N3 C5 C1 115.09(11) yes N3 C6 C7 112.94(11) yes N4 C7 C8 122.33(12) yes C6 C7 C8 120.23(12) no N4 C7 C6 117.40(12) yes C7 C8 C9 119.28(14) no C8 C9 C10 118.79(15) no C9 C10 C11 118.26(13) no N4 C11 C10 123.87(16) yes O2 C12 C2 120.46(11) yes N5 C12 C2 114.68(11) yes O2 C12 N5 124.74(12) yes N5 C13 C14 113.65(11) yes N6 C14 C13 115.99(11) yes N6 C14 C15 122.34(11) yes C13 C14 C15 121.65(10) no C14 C15 C16 119.52(12) no C15 C16 C17 118.67(13) no C16 C17 C18 118.35(12) no N6 C18 C17 123.91(12) yes N2 C3 H3 114.6(10) no C4 C3 H3 123.4(10) no N1 C4 H4 116.9(9) no C3 C4 H4 121.1(9) no N3 C6 H6A 106.8(10) no N3 C6 H6B 108.1(8) no C7 C6 H6A 111.2(8) no C7 C6 H6B 108.5(8) no H6A C6 H6B 109.4(12) no C7 C8 H8 119.8(10) no C9 C8 H8 120.9(10) no C8 C9 H9 118.9(11) no C10 C9 H9 122.3(11) no C9 C10 H10 122.7(10) no C11 C10 H10 119.0(10) no N4 C11 H11 115.8(10) no C10 C11 H11 120.3(10) no N5 C13 H13A 109.6(8) no N5 C13 H13B 106.8(8) no C14 C13 H13A 107.5(9) no C14 C13 H13B 108.1(8) no H13A C13 H13B 111.2(12) no C14 C15 H15 118.1(9) no C16 C15 H15 122.4(9) no C15 C16 H16 119.1(10) no C17 C16 H16 122.2(10) no C16 C17 H17 122.2(8) no C18 C17 H17 119.5(8) no N6 C18 H18 115.0(9) no C17 C18 H18 121.1(9) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C5 1.2299(15) yes O2 C12 1.2265(16) yes N1 C1 1.3408(16) yes N1 C4 1.3298(18) yes N2 C2 1.3407(17) yes N2 C3 1.3358(19) yes N3 C5 1.3297(16) yes N3 C6 1.4466(17) yes N4 C7 1.3337(18) yes N4 C11 1.3409(17) yes N5 C12 1.3363(16) yes N5 C13 1.4647(17) yes N6 C14 1.3389(14) yes N6 C18 1.3453(17) yes N3 H3N 0.896(17) no N5 H5N 0.928(16) no C1 C2 1.3938(17) no C1 C5 1.5044(17) no C2 C12 1.5109(18) no C3 C4 1.383(2) no C6 C7 1.5057(18) no C7 C8 1.3857(19) no C8 C9 1.3798(19) no C9 C10 1.379(2) no C10 C11 1.373(2) no C13 C14 1.5090(18) no C14 C15 1.3824(18) no C15 C16 1.382(2) no C16 C17 1.3772(18) no C17 C18 1.3741(19) no C3 H3 0.980(19) no C4 H4 0.978(17) no C6 H6A 0.972(17) no C6 H6B 1.021(15) no C8 H8 0.942(18) no C9 H9 0.99(2) no C10 H10 1.013(16) no C11 H11 1.009(18) no C13 H13A 1.001(14) no C13 H13B 0.990(14) no C15 H15 0.963(16) no C16 H16 0.978(17) no C17 H17 0.979(15) no C18 H18 0.980(16) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N3 H3N N1 . 0.896(17) 2.267(17) 2.6921(16) 108.7(13) yes N3 H3N N4 6_456 0.896(17) 2.547(17) 3.2785(16) 139.2(14) yes N5 H5N N6 5_656 0.928(16) 2.122(16) 3.0493(16) 178.3(13) yes C3 H3 O2 6_455 0.980(19) 2.378(19) 3.3178(18) 160.5(14) yes C6 H6A O1 6_456 0.972(17) 2.505(16) 3.1855(17) 127.0(11) yes C6 H6B O1 . 1.021(15) 2.437(15) 2.8114(16) 100.7(9) yes C10 H10 O2 8_555 1.013(16) 2.509(16) 3.4749(17) 159.2(13) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C4 N1 C1 C2 -0.16(16) no C4 N1 C1 C5 179.44(10) no C1 N1 C4 C3 -1.57(18) no C3 N2 C2 C1 -2.09(16) no C3 N2 C2 C12 -179.31(10) no C2 N2 C3 C4 0.37(18) no C6 N3 C5 O1 2.93(18) no C6 N3 C5 C1 -177.86(10) no C5 N3 C6 C7 97.34(13) no C11 N4 C7 C6 -178.86(13) no C11 N4 C7 C8 -1.1(2) no C7 N4 C11 C10 0.3(2) no C13 N5 C12 O2 14.69(19) no C13 N5 C12 C2 -169.22(11) no C12 N5 C13 C14 -89.76(13) no C18 N6 C14 C13 -176.90(11) no C18 N6 C14 C15 1.56(18) no C14 N6 C18 C17 0.15(19) no N1 C1 C2 N2 2.08(16) no C5 C1 C2 C12 -0.54(16) no N1 C1 C2 C12 179.05(10) no C5 C1 C2 N2 -177.51(10) no C2 C1 C5 O1 -6.56(16) no C2 C1 C5 N3 174.20(10) no N1 C1 C5 O1 173.85(10) no N1 C1 C5 N3 -5.40(14) no C1 C2 C12 O2 -95.14(15) no N2 C2 C12 O2 82.03(14) no N2 C2 C12 N5 -94.24(13) no C1 C2 C12 N5 88.60(14) no N2 C3 C4 N1 1.5(2) no N3 C6 C7 N4 -32.27(17) no N3 C6 C7 C8 149.91(13) no C6 C7 C8 C9 178.23(14) no N4 C7 C8 C9 0.5(2) no C7 C8 C9 C10 0.8(2) no C8 C9 C10 C11 -1.6(2) no C9 C10 C11 N4 1.0(3) no N5 C13 C14 N6 -85.59(13) no N5 C13 C14 C15 95.95(14) no C13 C14 C15 C16 176.92(12) no N6 C14 C15 C16 -1.5(2) no C14 C15 C16 C17 -0.4(2) no C15 C16 C17 C18 1.9(2) no C16 C17 C18 N6 -1.9(2) no