#------------------------------------------------------------------------------ #$Date: 2013-08-29 16:37:19 +0100 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/31/2203195.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203195 loop_ _publ_author_name 'Zhang, Xian-Ming' 'Fang, Rui-Qin' 'Wu, Hai-Shun' 'Ng, Seik Weng' _publ_section_title ; Tetraaquabis(4-pyridylthioacetato)nickel(II) ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m135 _journal_page_last m136 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Ni (C7 H6 N O2 S)2 (H2 O)4]' _chemical_formula_moiety '4(H2 O), 2(C7 H6 N O2 S), Ni' _chemical_formula_sum 'C14 H20 N2 Ni O8 S2' _chemical_formula_weight 467.15 _chemical_name_systematic ; Tetraaquabis(4-pyridylthioactetato)nickel(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yab' _symmetry_space_group_name_H-M 'P 1 21/a 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 107.3930(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 7.4924(5) _cell_length_b 10.4589(7) _cell_length_c 12.1369(8) _cell_measurement_reflns_used 3212 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 26.9 _cell_measurement_theta_min 2.6 _cell_volume 907.59(10) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction 'SAINT (Bruker, 2001)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'difference Fourier, with Ni at (1/2, 1/2, 1/2)' _diffrn_ambient_temperature 298(2) _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device_type 'Bruker SMART APEX area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.015 _diffrn_reflns_av_sigmaI/netI 0.021 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 5157 _diffrn_reflns_theta_full 27.0 _diffrn_reflns_theta_max 27.0 _diffrn_reflns_theta_min 1.8 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.35 _exptl_absorpt_correction_T_max 0.889 _exptl_absorpt_correction_T_min 0.753 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour Blue _exptl_crystal_density_diffrn 1.709 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 484 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.19 _exptl_crystal_size_min 0.09 _refine_diff_density_max 0.37 _refine_diff_density_min -0.17 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.04 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 164 _refine_ls_number_reflns 1960 _refine_ls_number_restraints 10 _refine_ls_restrained_S_all 1.04 _refine_ls_R_factor_all 0.029 _refine_ls_R_factor_gt 0.026 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0462P)^2^+0.1843P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.070 _refine_ls_wR_factor_ref 0.072 _reflns_number_gt 1813 _reflns_number_total 1960 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file hg6016.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/a' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 907.60(10) _cod_database_code 2203195 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z' '-x, -y, -z' 'x-1/2, -y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Ni1 0.5000 0.5000 0.5000 0.02070(10) Uani d S 1 Ni S1 0.91703(6) 0.69526(4) 1.03479(3) 0.03140(10) Uani d . 1 S O1 1.0723(2) 0.69551(12) 1.28100(10) 0.0382(3) Uani d . 1 O O2 0.9398(2) 0.51701(14) 1.32120(10) 0.0418(3) Uani d . 1 O O1w 0.5797(2) 0.31611(11) 0.55720(10) 0.0301(3) Uani d D 1 O O2w 0.7633(2) 0.53151(15) 0.48900(10) 0.0387(3) Uani d D 1 O N1 0.5955(2) 0.57068(12) 0.67000(10) 0.0251(3) Uani d . 1 N C1 0.9667(2) 0.60111(16) 1.25410(10) 0.0297(3) Uani d . 1 C C2 0.8545(2) 0.58104(17) 1.12810(10) 0.0313(4) Uani d D 1 C C3 0.6892(2) 0.68180(16) 0.69340(10) 0.0316(4) Uani d D 1 C C4 0.7813(2) 0.72242(16) 0.80360(10) 0.0307(3) Uani d D 1 C C5 0.7802(2) 0.64573(15) 0.89750(10) 0.0236(3) Uani d . 1 C C6 0.6759(2) 0.53384(16) 0.87420(10) 0.0264(3) Uani d D 1 C C7 0.5875(2) 0.50083(14) 0.76070(10) 0.0263(3) Uani d D 1 C H1w1 0.691(2) 0.318(3) 0.600(2) 0.065(8) Uiso d D 1 H H1w2 0.517(3) 0.277(2) 0.594(2) 0.061(7) Uiso d D 1 H H2w1 0.801(3) 0.526(2) 0.431(2) 0.048(7) Uiso d D 1 H H2w2 0.852(3) 0.515(2) 0.548(2) 0.056(8) Uiso d D 1 H H2a 0.725(2) 0.589(2) 1.121(2) 0.042(6) Uiso d D 1 H H2b 0.878(4) 0.4950(10) 1.110(2) 0.053(7) Uiso d D 1 H H3 0.698(3) 0.731(2) 0.6300(10) 0.046(6) Uiso d D 1 H H4 0.845(2) 0.8020(10) 0.814(2) 0.036(5) Uiso d D 1 H H6 0.669(3) 0.475(2) 0.9320(10) 0.035(5) Uiso d D 1 H H7 0.525(2) 0.4210(10) 0.747(2) 0.027(4) Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 0.0223(2) 0.0242(2) 0.0147(2) -0.00040(10) 0.00410(10) 0.00100(10) S1 0.0354(2) 0.0352(2) 0.0196(2) -0.0083(2) 0.0021(2) -0.0036(2) O1 0.0402(7) 0.0397(7) 0.0268(6) 0.0042(5) -0.0021(5) -0.0075(5) O2 0.0422(8) 0.0611(9) 0.0216(6) 0.0018(6) 0.0086(5) 0.0050(5) O1w 0.0353(7) 0.0279(6) 0.0241(6) 0.0027(5) 0.0044(5) 0.0042(4) O2w 0.0258(6) 0.0661(8) 0.0243(6) -0.0024(6) 0.0080(5) 0.0051(6) N1 0.0287(6) 0.0276(7) 0.0174(6) -0.0006(5) 0.0045(5) 0.0002(5) C1 0.0280(8) 0.0414(9) 0.0183(7) 0.0102(7) 0.0046(6) -0.0038(6) C2 0.0324(8) 0.0397(9) 0.0196(7) -0.0015(7) 0.0045(6) -0.0002(6) C3 0.0409(9) 0.0306(8) 0.0217(8) -0.0060(7) 0.0070(7) 0.0034(6) C4 0.0381(9) 0.0279(8) 0.0249(8) -0.0084(7) 0.0077(7) -0.0003(6) C5 0.0229(7) 0.0281(8) 0.0180(7) 0.0009(6) 0.0036(5) -0.0022(6) C6 0.0333(8) 0.0259(7) 0.0191(7) -0.0010(6) 0.0067(6) 0.0015(6) C7 0.0310(9) 0.0263(8) 0.0203(8) -0.0039(6) 0.0057(6) -0.0018(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1w Ni1 O1w . 3_666 180 yes O1w Ni1 O2w . . 89.10(10) yes O1w Ni1 O2w . 3_666 90.90(10) yes O1w Ni1 N1 . . 91.00(10) yes O1w Ni1 N1 . 3_666 89.00(10) yes O1w Ni1 O2w 3_666 . 90.90(10) no O1w Ni1 O2w 3_666 3_666 89.10(10) no O1w Ni1 N1 3_666 . 89.00(10) no O1w Ni1 N1 3_666 3_666 91.00(10) no O2w Ni1 O2w . 3_666 180 yes O2w Ni1 N1 . . 87.50(10) yes O2w Ni1 N1 . 3_666 92.50(10) yes O2w Ni1 N1 3_666 . 92.50(10) no O2w Ni1 N1 3_666 3_666 87.50(10) no N1 Ni1 N1 . 3_666 180 yes C5 S1 C2 . . 102.30(10) no C7 N1 C3 . . 116.60(10) no C7 N1 Ni1 . . 122.00(10) no C3 N1 Ni1 . . 120.90(10) no O1 C1 O2 . . 126.7(2) no O1 C1 C2 . . 119.3(2) no O2 C1 C2 . . 114.0(2) no C1 C2 S1 . . 111.70(10) no N1 C3 C4 . . 123.40(10) no C3 C4 C5 . . 119.5(2) no C6 C5 C4 . . 117.30(10) no C6 C5 S1 . . 125.10(10) no C4 C5 S1 . . 117.50(10) no C7 C6 C5 . . 119.10(10) no N1 C7 C6 . . 123.90(10) no Ni1 O1w H1w1 . . 109(2) no Ni1 O1w H1w2 . . 118(2) no H1w1 O1w H1w2 . . 107(2) no Ni1 O2w H2w1 . . 129(2) no Ni1 O2w H2w2 . . 117(2) no H2w1 O2w H2w2 . . 109(3) no C1 C2 H2a . . 109.0(10) no S1 C2 H2a . . 110.0(10) no C1 C2 H2b . . 106(2) no S1 C2 H2b . . 113(2) no H2a C2 H2b . . 108(2) no N1 C3 H3 . . 117.0(10) no C4 C3 H3 . . 119.0(10) no C3 C4 H4 . . 119.0(10) no C5 C4 H4 . . 122.0(10) no C7 C6 H6 . . 118.0(10) no C5 C6 H6 . . 123.0(10) no N1 C7 H7 . . 118.0(10) no C6 C7 H7 . . 118.0(10) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Ni1 O1w . 2.0710(10) yes Ni1 O1w 3_666 2.0710(10) ? Ni1 O2w . 2.0440(10) yes Ni1 O2w 3_666 2.0440(10) ? Ni1 N1 . 2.1060(10) yes Ni1 N1 3_666 2.1060(10) ? S1 C2 . 1.802(2) ? S1 C5 . 1.754(2) ? O1 C1 . 1.246(2) ? O2 C1 . 1.255(2) ? N1 C7 . 1.337(2) ? N1 C3 . 1.344(2) ? C1 C2 . 1.523(2) ? C3 C4 . 1.376(2) ? C4 C5 . 1.395(2) ? C5 C6 . 1.389(2) ? C6 C7 . 1.382(2) ? O1w H1w1 . 0.840(10) ? O1w H1w2 . 0.840(10) ? O2w H2w1 . 0.830(10) ? O2w H2w2 . 0.840(10) ? C2 H2a . 0.950(10) ? C2 H2b . 0.950(10) ? C3 H3 . 0.950(10) ? C4 H4 . 0.950(10) ? C6 H6 . 0.950(10) ? C7 H7 . 0.950(10) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O1w H1w1 O1 3_767 0.840(10) 1.930(10) 2.759(2) 168(3) yes O1w H1w2 O1 2_647 0.840(10) 2.020(10) 2.842(2) 165(2) yes O2w H2w1 O2 1_554 0.830(10) 1.920(10) 2.744(2) 168(2) yes O2w H2w2 O2 3_767 0.840(10) 1.890(10) 2.729(2) 177(3) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion _geom_torsion_publ_flag O2w Ni1 N1 C7 . -121.80(10) no O2w Ni1 N1 C7 3_666 58.20(10) no O1w Ni1 N1 C7 . -32.70(10) no O1w Ni1 N1 C7 3_666 147.30(10) no O2w Ni1 N1 C3 . 49.50(10) no O2w Ni1 N1 C3 3_666 -130.50(10) no O1w Ni1 N1 C3 . 138.50(10) no O1w Ni1 N1 C3 3_666 -41.50(10) no O1 C1 C2 S1 . 6.2(2) no O2 C1 C2 S1 . -174.10(10) no C5 S1 C2 C1 . 176.80(10) no C7 N1 C3 C4 . 2.8(2) no Ni1 N1 C3 C4 . -168.90(10) no N1 C3 C4 C5 . 0.4(3) no C3 C4 C5 C6 . -3.4(2) no C3 C4 C5 S1 . 174.40(10) no C2 S1 C5 C6 . -8.4(2) no C2 S1 C5 C4 . 174.00(10) no C4 C5 C6 C7 . 3.3(2) no S1 C5 C6 C7 . -174.30(10) no C3 N1 C7 C6 . -2.9(2) no Ni1 N1 C7 C6 . 168.70(10) no C5 C6 C7 N1 . -0.1(3) no _cod_database_fobs_code 2203195