#------------------------------------------------------------------------------ #$Date: 2008-01-27 14:50:57 +0000 (Sun, 27 Jan 2008) $ #$Revision: 30 $ #$URL: svn://www.crystallography.net/cod/cif/2/2203206.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2203206 loop_ _publ_author_name 'Marilyn M. Olmstead' 'Jeff T. Suri' 'Bakthan Singaram' _publ_section_title ; N-[2-(Hydroxymethoxyboryl)benzyl]-4,7-phenanthrolinium bromide methanol solvate ; _journal_issue 2 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o278 _journal_page_last o280 _journal_volume 60 _journal_year 2004 _chemical_formula_moiety 'C20 H18 B N2 O2 1+, Br 1- C H4 O' _chemical_formula_sum 'C21 H22 B Br N2 O3' _chemical_formula_weight 441.13 _chemical_name_systematic ; N-[2-(Hydroxymethoxyboryl)benzyl]-4,7-phenanthrolinium bromide methanol solvate ; _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 21/c' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 103.723(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 16.376(3) _cell_length_b 13.894(3) _cell_length_c 9.0289(15) _cell_measurement_reflns_used 545 _cell_measurement_temperature 90(2) _cell_measurement_theta_max 25. _cell_measurement_theta_min 2.5 _cell_volume 1995.7(7) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2002)' _computing_data_reduction 'SAINT (Bruker, 2002)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1994)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 90(2) _diffrn_detector_area_resol_mean 8.3 _diffrn_measured_fraction_theta_full 0.991 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Bruker SMART 1000' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0612 _diffrn_reflns_av_sigmaI/netI 0.0682 _diffrn_reflns_limit_h_max 19 _diffrn_reflns_limit_h_min -19 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 11491 _diffrn_reflns_theta_full 25.34 _diffrn_reflns_theta_max 25.34 _diffrn_reflns_theta_min 1.95 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 2.084 _exptl_absorpt_correction_T_max 0.9030 _exptl_absorpt_correction_T_min 0.7054 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 2001)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.468 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 904 _exptl_crystal_size_max 0.18 _exptl_crystal_size_mid 0.11 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.526 _refine_diff_density_min -0.631 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.119 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 261 _refine_ls_number_reflns 3618 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.119 _refine_ls_R_factor_all 0.0677 _refine_ls_R_factor_gt 0.0420 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0382P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0901 _refine_ls_wR_factor_ref 0.0962 _reflns_number_gt 2624 _reflns_number_total 3618 _reflns_threshold_expression I>2\s(I) loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Br1 0.78239(2) 0.58393(3) 0.31425(4) 0.01940(13) Uani d . 1 Br O1 0.48970(18) 0.5484(2) 0.2154(3) 0.0303(7) Uani d . 1 O H1A 0.527(3) 0.585(3) 0.263(5) 0.036 Uiso d . 1 H O2 0.35007(16) 0.49847(19) 0.1386(3) 0.0202(6) Uani d . 1 O N1 0.16625(18) 0.5979(2) 0.3377(3) 0.0148(7) Uani d . 1 N N2 -0.03533(19) 0.6233(2) -0.2513(3) 0.0177(7) Uani d . 1 N C1 0.1151(2) 0.6048(2) 0.1921(4) 0.0147(8) Uani d . 1 C C2 0.1491(2) 0.5906(3) 0.0625(4) 0.0163(8) Uani d . 1 C H2 0.2073 0.5774 0.0754 0.020 Uiso calc R 1 H C3 0.0978(2) 0.5959(3) -0.0794(4) 0.0173(8) Uani d . 1 C H3 0.1206 0.5843 -0.1652 0.021 Uiso calc R 1 H C4 0.0103(2) 0.6184(3) -0.1035(4) 0.0148(8) Uani d . 1 C C5 -0.1165(2) 0.6429(3) -0.2732(4) 0.0185(9) Uani d . 1 C H5 -0.1492 0.6469 -0.3751 0.022 Uiso calc R 1 H C6 -0.1570(2) 0.6582(3) -0.1548(4) 0.0184(8) Uani d . 1 C H6 -0.2155 0.6721 -0.1772 0.022 Uiso calc R 1 H C7 -0.1117(2) 0.6527(3) -0.0063(4) 0.0165(8) Uani d . 1 C H7 -0.1384 0.6624 0.0752 0.020 Uiso calc R 1 H C8 -0.0252(2) 0.6327(3) 0.0235(4) 0.0134(8) Uani d . 1 C C9 0.0285(2) 0.6249(3) 0.1754(4) 0.0126(8) Uani d . 1 C C10 -0.0025(2) 0.6338(3) 0.3078(4) 0.0157(8) Uani d . 1 C H10 -0.0606 0.6462 0.2983 0.019 Uiso calc R 1 H C11 0.0500(2) 0.6249(3) 0.4498(4) 0.0170(8) Uani d . 1 C H11 0.0288 0.6304 0.5387 0.020 Uiso calc R 1 H C12 0.1347(2) 0.6077(3) 0.4614(4) 0.0179(9) Uani d . 1 C H12 0.1715 0.6026 0.5597 0.021 Uiso calc R 1 H C13 0.2583(2) 0.5821(3) 0.3617(4) 0.0162(8) Uani d . 1 C H13A 0.2682 0.5278 0.2972 0.019 Uiso calc R 1 H H13B 0.2821 0.5644 0.4695 0.019 Uiso calc R 1 H C14 0.3028(2) 0.6715(3) 0.3228(4) 0.0159(8) Uani d . 1 C C15 0.2760(2) 0.7617(3) 0.3585(4) 0.0203(9) Uani d . 1 C H15 0.2288 0.7664 0.4022 0.024 Uiso calc R 1 H C16 0.3167(2) 0.8446(3) 0.3318(4) 0.0219(9) Uani d . 1 C H16 0.2970 0.9057 0.3552 0.026 Uiso calc R 1 H C17 0.3865(2) 0.8383(3) 0.2708(4) 0.0250(9) Uani d . 1 C H17 0.4149 0.8950 0.2518 0.030 Uiso calc R 1 H C18 0.4146(2) 0.7483(3) 0.2375(4) 0.0238(9) Uani d . 1 C H18 0.4635 0.7445 0.1984 0.029 Uiso calc R 1 H C19 0.3733(2) 0.6624(3) 0.2598(4) 0.0169(8) Uani d . 1 C B1 0.4074(3) 0.5655(3) 0.2051(5) 0.0221(10) Uani d . 1 B C20 0.3772(3) 0.4130(3) 0.0738(4) 0.0272(9) Uani d . 1 C H20C 0.4212 0.4298 0.0213 0.041 Uiso calc R 1 H H20A 0.3294 0.3844 0.0007 0.041 Uiso calc R 1 H H20B 0.3995 0.3666 0.1551 0.041 Uiso calc R 1 H O3 0.60938(18) 0.6693(2) 0.3600(3) 0.0324(7) Uani d . 1 O H3A 0.663(3) 0.644(3) 0.349(5) 0.039 Uiso d . 1 H C21 0.6140(3) 0.6727(4) 0.5192(5) 0.0405(12) Uani d . 1 C H21A 0.6155 0.6070 0.5592 0.061 Uiso calc R 1 H H21B 0.5647 0.7063 0.5370 0.061 Uiso calc R 1 H H21C 0.6651 0.7070 0.5710 0.061 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Br1 0.0177(2) 0.0239(2) 0.01666(19) -0.00196(19) 0.00435(14) 0.00002(19) O1 0.0200(16) 0.0284(17) 0.0426(19) 0.0021(13) 0.0077(14) -0.0105(14) O2 0.0211(14) 0.0209(15) 0.0194(14) 0.0024(12) 0.0062(11) -0.0012(12) N1 0.0157(15) 0.0162(18) 0.0133(15) 0.0012(13) 0.0050(12) 0.0010(13) N2 0.0211(18) 0.0181(17) 0.0131(16) -0.0050(14) 0.0029(14) -0.0022(13) C1 0.0172(19) 0.011(2) 0.0154(18) -0.0020(14) 0.0019(15) 0.0018(14) C2 0.0163(18) 0.017(2) 0.0168(18) -0.0001(17) 0.0072(15) -0.0013(17) C3 0.022(2) 0.021(2) 0.0126(17) -0.0055(17) 0.0108(15) -0.0036(16) C4 0.018(2) 0.0120(19) 0.0146(18) -0.0009(15) 0.0039(16) 0.0033(15) C5 0.023(2) 0.016(2) 0.0131(19) -0.0046(17) -0.0018(16) 0.0021(16) C6 0.0153(19) 0.014(2) 0.024(2) 0.0005(16) 0.0023(16) -0.0004(17) C7 0.0171(19) 0.019(2) 0.0146(18) -0.0007(16) 0.0051(16) -0.0018(16) C8 0.0190(19) 0.0112(19) 0.0097(17) 0.0004(15) 0.0026(15) 0.0002(14) C9 0.0143(18) 0.0132(19) 0.0124(18) -0.0019(15) 0.0072(15) -0.0007(14) C10 0.0138(19) 0.018(2) 0.0164(19) 0.0025(16) 0.0047(15) 0.0003(16) C11 0.021(2) 0.019(2) 0.0142(19) -0.0007(16) 0.0105(16) 0.0006(16) C12 0.025(2) 0.018(2) 0.0114(18) 0.0016(16) 0.0061(16) 0.0007(15) C13 0.0171(18) 0.018(2) 0.0149(17) 0.0022(17) 0.0063(15) 0.0005(17) C14 0.0111(19) 0.022(2) 0.0107(18) -0.0007(15) -0.0041(15) -0.0010(16) C15 0.020(2) 0.025(2) 0.0174(19) -0.0002(17) 0.0064(16) -0.0001(16) C16 0.023(2) 0.019(2) 0.019(2) 0.0036(18) -0.0043(17) -0.0020(17) C17 0.021(2) 0.023(2) 0.028(2) -0.0053(18) -0.0003(18) 0.0020(19) C18 0.0139(19) 0.028(2) 0.030(2) 0.0010(17) 0.0049(17) 0.0014(19) C19 0.0154(19) 0.019(2) 0.0142(19) 0.0034(16) -0.0003(15) 0.0016(16) B1 0.026(3) 0.023(3) 0.019(2) 0.004(2) 0.009(2) 0.0048(19) C20 0.030(2) 0.029(2) 0.023(2) 0.007(2) 0.0065(18) -0.002(2) O3 0.0258(16) 0.040(2) 0.0306(16) 0.0043(14) 0.0056(14) -0.0022(14) C21 0.044(3) 0.056(3) 0.024(2) 0.006(2) 0.013(2) 0.010(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' B B 0.0013 0.0007 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Br Br -0.2901 2.4595 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle B1 O1 H1A 122(3) B1 O2 C20 119.8(3) C12 N1 C1 121.1(3) C12 N1 C13 118.0(3) C1 N1 C13 120.9(3) C5 N2 C4 116.9(3) N1 C1 C9 118.7(3) N1 C1 C2 120.2(3) C9 C1 C2 121.1(3) C3 C2 C1 119.6(3) C3 C2 H2 120.2 C1 C2 H2 120.2 C2 C3 C4 121.8(3) C2 C3 H3 119.1 C4 C3 H3 119.1 N2 C4 C8 123.3(3) N2 C4 C3 117.0(3) C8 C4 C3 119.7(3) N2 C5 C6 123.8(3) N2 C5 H5 118.1 C6 C5 H5 118.1 C7 C6 C5 119.5(3) C7 C6 H6 120.2 C5 C6 H6 120.2 C6 C7 C8 119.0(3) C6 C7 H7 120.5 C8 C7 H7 120.5 C7 C8 C4 117.4(3) C7 C8 C9 123.6(3) C4 C8 C9 118.9(3) C10 C9 C1 118.6(3) C10 C9 C8 122.5(3) C1 C9 C8 118.8(3) C11 C10 C9 120.8(3) C11 C10 H10 119.6 C9 C10 H10 119.6 C10 C11 C12 118.8(3) C10 C11 H11 120.6 C12 C11 H11 120.6 N1 C12 C11 122.0(3) N1 C12 H12 119.0 C11 C12 H12 119.0 N1 C13 C14 111.7(3) N1 C13 H13A 109.3 C14 C13 H13A 109.3 N1 C13 H13B 109.3 C14 C13 H13B 109.3 H13A C13 H13B 108.0 C15 C14 C19 120.6(4) C15 C14 C13 119.1(3) C19 C14 C13 120.2(3) C16 C15 C14 121.3(3) C16 C15 H15 119.4 C14 C15 H15 119.4 C15 C16 C17 119.7(4) C15 C16 H16 120.1 C17 C16 H16 120.1 C16 C17 C18 119.3(4) C16 C17 H17 120.3 C18 C17 H17 120.3 C17 C18 C19 122.4(4) C17 C18 H18 118.8 C19 C18 H18 118.8 C18 C19 C14 116.7(4) C18 C19 B1 117.3(3) C14 C19 B1 125.9(3) O1 B1 O2 119.0(4) O1 B1 C19 123.3(4) O2 B1 C19 117.6(4) O2 C20 H20C 109.5 O2 C20 H20A 109.5 H20C C20 H20A 109.5 O2 C20 H20B 109.5 H20C C20 H20B 109.5 H20A C20 H20B 109.5 C21 O3 H3A 106(3) O3 C21 H21A 109.5 O3 C21 H21B 109.5 H21A C21 H21B 109.5 O3 C21 H21C 109.5 H21A C21 H21C 109.5 H21B C21 H21C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 B1 1.349(5) O1 H1A 0.83(5) O2 B1 1.357(5) O2 C20 1.440(5) N1 C12 1.345(4) N1 C1 1.384(4) N1 C13 1.487(4) N2 C5 1.326(5) N2 C4 1.368(4) C1 C9 1.418(5) C1 C2 1.424(5) C2 C3 1.357(5) C2 H2 0.9500 C3 C4 1.433(5) C3 H3 0.9500 C4 C8 1.416(5) C5 C6 1.401(5) C5 H5 0.9500 C6 C7 1.372(5) C6 H6 0.9500 C7 C8 1.406(5) C7 H7 0.9500 C8 C9 1.447(5) C9 C10 1.410(5) C10 C11 1.370(5) C10 H10 0.9500 C11 C12 1.386(5) C11 H11 0.9500 C12 H12 0.9500 C13 C14 1.524(5) C13 H13A 0.9900 C13 H13B 0.9900 C14 C15 1.391(5) C14 C19 1.408(5) C15 C16 1.381(5) C15 H15 0.9500 C16 C17 1.384(5) C16 H16 0.9500 C17 C18 1.390(6) C17 H17 0.9500 C18 C19 1.409(5) C18 H18 0.9500 C19 B1 1.582(6) C20 H20C 0.9800 C20 H20A 0.9800 C20 H20B 0.9800 O3 C21 1.422(5) O3 H3A 0.98(4) C21 H21A 0.9800 C21 H21B 0.9800 C21 H21C 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1 H1A O3 . 0.83(5) 1.84(5) 2.674(4) 178(5) O3 H3A Br1 . 0.97(5) 2.22(5) 3.187(3) 177(4) C12 H12 Br1 3_666 0.95 2.86 3.425(4) 119 C10 H10 Br1 1_455 0.95 2.75 3.604(4) 150 C13 H13A O2 . 0.99 2.22 3.017(5) 137 C11 H11 N2 1_556 0.95 2.38 3.320(5) 172 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C12 N1 C1 C9 1.7(5) C13 N1 C1 C9 -176.8(3) C12 N1 C1 C2 -177.6(3) C13 N1 C1 C2 4.0(5) N1 C1 C2 C3 178.9(3) C9 C1 C2 C3 -0.3(5) C1 C2 C3 C4 2.0(6) C5 N2 C4 C8 0.4(5) C5 N2 C4 C3 179.1(3) C2 C3 C4 N2 179.1(3) C2 C3 C4 C8 -2.1(5) C4 N2 C5 C6 -0.3(5) N2 C5 C6 C7 -0.1(6) C5 C6 C7 C8 0.5(5) C6 C7 C8 C4 -0.4(5) C6 C7 C8 C9 -179.7(3) N2 C4 C8 C7 0.0(5) C3 C4 C8 C7 -178.8(3) N2 C4 C8 C9 179.4(3) C3 C4 C8 C9 0.6(5) N1 C1 C9 C10 -2.2(5) C2 C1 C9 C10 177.0(3) N1 C1 C9 C8 179.6(3) C2 C1 C9 C8 -1.1(5) C7 C8 C9 C10 2.2(6) C4 C8 C9 C10 -177.1(3) C7 C8 C9 C1 -179.7(3) C4 C8 C9 C1 0.9(5) C1 C9 C10 C11 1.1(5) C8 C9 C10 C11 179.2(3) C9 C10 C11 C12 0.6(5) C1 N1 C12 C11 0.0(5) C13 N1 C12 C11 178.5(3) C10 C11 C12 N1 -1.1(6) C12 N1 C13 C14 -106.7(3) C1 N1 C13 C14 71.8(4) N1 C13 C14 C15 37.5(4) N1 C13 C14 C19 -146.2(3) C19 C14 C15 C16 0.8(5) C13 C14 C15 C16 177.1(3) C14 C15 C16 C17 -1.2(5) C15 C16 C17 C18 -0.1(6) C16 C17 C18 C19 1.8(6) C17 C18 C19 C14 -2.1(5) C17 C18 C19 B1 175.2(4) C15 C14 C19 C18 0.8(5) C13 C14 C19 C18 -175.4(3) C15 C14 C19 B1 -176.2(3) C13 C14 C19 B1 7.5(5) C20 O2 B1 O1 -3.1(5) C20 O2 B1 C19 174.1(3) C18 C19 B1 O1 36.2(5) C14 C19 B1 O1 -146.8(4) C18 C19 B1 O2 -140.9(4) C14 C19 B1 O2 36.1(5)