#------------------------------------------------------------------------------ #$Date: 2008-03-30 11:21:05 +0100 (Sun, 30 Mar 2008) $ #$Revision: 321 $ #$URL: svn://www.crystallography.net/cod/cif/2/2203362.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203362 loop_ _publ_author_name 'Du, Miao' 'Zhao, Xiao-Jun' 'Guo, Jian-Hua' _publ_section_title ; 5-(4-Pyridyl)-1,3,4-oxadiazole-2(3H)-thione ; _journal_issue 3 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o327 _journal_page_last o328 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C7 H5 N3 O S' _chemical_formula_moiety 'C7 H5 N3 O S' _chemical_formula_sum 'C7 H5 N3 O S' _chemical_formula_weight 179.20 _chemical_name_systematic ; 5-(4-Pyridyl)-1,3,4-oxadiazole-2(3H)-thione ; _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 21/n' _cell_angle_alpha 90.00 _cell_angle_beta 97.930(6) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 4.869(2) _cell_length_b 13.902(5) _cell_length_c 11.839(4) _cell_measurement_reflns_used 683 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 24.10 _cell_measurement_theta_min 2.27 _cell_volume 793.6(5) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction 'SAINT (Bruker, 1998)' _computing_molecular_graphics 'DIAMOND (Brandenburg & Berndt, 1999)' _computing_publication_material 'SHELXTL (Bruker, 1998)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device 'Bruker SMART 1000' _diffrn_measurement_method \w _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0395 _diffrn_reflns_av_sigmaI/netI 0.0465 _diffrn_reflns_limit_h_max 4 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 4439 _diffrn_reflns_theta_full 26.39 _diffrn_reflns_theta_max 26.39 _diffrn_reflns_theta_min 2.27 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.356 _exptl_absorpt_correction_T_max 0.9684 _exptl_absorpt_correction_T_min 0.9546 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1997)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.500 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 368 _exptl_crystal_size_max 0.24 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.208 _refine_diff_density_min -0.221 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.085 _refine_ls_hydrogen_treatment constr _refine_ls_number_parameters 109 _refine_ls_number_reflns 1616 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.085 _refine_ls_R_factor_all 0.0791 _refine_ls_R_factor_gt 0.0447 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0325P)^2^+0.1604P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0818 _refine_ls_wR_factor_ref 0.0920 _reflns_number_gt 1112 _reflns_number_total 1616 _reflns_threshold_expression I>2\s(I) loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol S1 0.20965(15) 0.47730(5) 0.22950(6) 0.0613(3) Uani d . 1 S O1 0.5789(3) 0.58746(11) 0.35848(13) 0.0413(4) Uani d . 1 O N1 0.2735(4) 0.66994(13) 0.25196(15) 0.0400(5) Uani d . 1 N H1 0.1328 0.6853 0.2031 0.048 Uiso calc R 1 H N2 0.4459(4) 0.73605(13) 0.31172(16) 0.0410(5) Uani d . 1 N N3 1.3180(4) 0.77811(14) 0.60246(16) 0.0445(5) Uani d . 1 N C1 0.3472(4) 0.57973(17) 0.27766(18) 0.0393(6) Uani d . 1 C C2 0.6246(4) 0.68426(16) 0.37347(17) 0.0336(5) Uani d . 1 C C3 1.2454(5) 0.68580(19) 0.5961(2) 0.0488(6) Uani d . 1 C H3 1.3513 0.6420 0.6430 0.059 Uiso calc R 1 H C4 1.0208(5) 0.65194(17) 0.52339(19) 0.0435(6) Uani d . 1 C H4 0.9774 0.5868 0.5212 0.052 Uiso calc R 1 H C5 0.8613(4) 0.71618(16) 0.45382(18) 0.0346(5) Uani d . 1 C C6 0.9336(5) 0.81280(17) 0.46052(19) 0.0424(6) Uani d . 1 C H6 0.8303 0.8583 0.4154 0.051 Uiso calc R 1 H C7 1.1627(5) 0.83948(17) 0.5359(2) 0.0467(6) Uani d . 1 C H7 1.2110 0.9042 0.5403 0.056 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 0.0599(5) 0.0484(4) 0.0689(5) -0.0058(3) -0.0151(3) -0.0094(4) O1 0.0405(9) 0.0359(9) 0.0435(9) 0.0024(7) -0.0087(7) -0.0030(7) N1 0.0359(11) 0.0437(12) 0.0370(11) 0.0028(9) -0.0070(8) 0.0013(9) N2 0.0403(11) 0.0409(11) 0.0392(11) -0.0002(9) -0.0037(9) 0.0017(9) N3 0.0384(11) 0.0518(13) 0.0415(12) -0.0029(10) -0.0015(9) -0.0045(10) C1 0.0363(13) 0.0466(14) 0.0337(13) 0.0015(11) 0.0003(10) -0.0014(11) C2 0.0352(12) 0.0348(12) 0.0309(12) 0.0020(10) 0.0043(9) 0.0014(11) C3 0.0451(14) 0.0521(16) 0.0453(14) 0.0081(13) -0.0073(11) 0.0012(12) C4 0.0483(15) 0.0347(14) 0.0447(15) 0.0012(11) -0.0034(11) -0.0006(11) C5 0.0309(12) 0.0385(13) 0.0344(12) 0.0012(10) 0.0046(10) -0.0016(10) C6 0.0410(13) 0.0406(14) 0.0436(14) 0.0027(11) -0.0010(11) 0.0056(11) C7 0.0457(15) 0.0423(15) 0.0507(16) -0.0054(11) 0.0019(12) -0.0015(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 O1 C1 105.59(16) yes C1 N1 N2 112.78(18) yes C1 N1 H1 123.6 ? N2 N1 H1 123.6 ? C2 N2 N1 103.71(18) yes C7 N3 C3 117.5(2) yes N1 C1 O1 104.75(19) ? N1 C1 S1 130.91(17) yes O1 C1 S1 124.33(17) yes N2 C2 O1 113.16(18) ? N2 C2 C5 128.0(2) ? O1 C2 C5 118.84(18) ? N3 C3 C4 123.1(2) ? N3 C3 H3 118.4 ? C4 C3 H3 118.4 ? C3 C4 C5 119.0(2) ? C3 C4 H4 120.5 ? C5 C4 H4 120.5 ? C4 C5 C6 118.4(2) ? C4 C5 C2 121.4(2) ? C6 C5 C2 120.20(19) ? C7 C6 C5 118.2(2) ? C7 C6 H6 120.9 ? C5 C6 H6 120.9 ? N3 C7 C6 123.7(2) ? N3 C7 H7 118.1 ? C6 C7 H7 118.1 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S1 C1 1.642(2) yes O1 C2 1.371(2) ? O1 C1 1.379(3) ? N1 C1 1.328(3) yes N1 N2 1.373(2) yes N1 H1 0.8600 ? N2 C2 1.278(3) yes N3 C7 1.325(3) yes N3 C3 1.330(3) yes C2 C5 1.458(3) ? C3 C4 1.378(3) ? C3 H3 0.9300 ? C4 C5 1.379(3) ? C4 H4 0.9300 ? C5 C6 1.388(3) ? C6 C7 1.380(3) ? C6 H6 0.9300 ? C7 H7 0.9300 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 N3 4_475 0.86 1.88 2.737(3) 177 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C1 N1 N2 C2 0.1(3) N2 N1 C1 O1 0.2(2) N2 N1 C1 S1 -179.75(18) C2 O1 C1 N1 -0.4(2) C2 O1 C1 S1 179.54(16) N1 N2 C2 O1 -0.4(2) N1 N2 C2 C5 179.2(2) C1 O1 C2 N2 0.5(2) C1 O1 C2 C5 -179.15(18) C7 N3 C3 C4 0.7(4) N3 C3 C4 C5 -0.3(4) C3 C4 C5 C6 -0.3(3) C3 C4 C5 C2 178.7(2) N2 C2 C5 C4 173.3(2) O1 C2 C5 C4 -7.1(3) N2 C2 C5 C6 -7.7(4) O1 C2 C5 C6 171.9(2) C4 C5 C6 C7 0.5(3) C2 C5 C6 C7 -178.6(2) C3 N3 C7 C6 -0.6(4) C5 C6 C7 N3 0.0(4)