#------------------------------------------------------------------------------ #$Date: 2008-03-30 11:21:05 +0100 (Sun, 30 Mar 2008) $ #$Revision: 321 $ #$URL: svn://www.crystallography.net/cod/cif/2/2203472.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203472 loop_ _publ_author_name 'Fang, Rui-Qin' 'Zhang, Xian-Ming' 'Wu, Hai-Shun' 'Ng^a^, Seik Weng' _publ_section_title ; Tetraaquabis(4-pyridylthioacetato)copper(II) ; _journal_issue 4 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m401 _journal_page_last m402 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Cu (C7 H6 N O2 S)2 (H2 O)4]' _chemical_formula_moiety '2C7 H6 N O2 S, 4H2 O, Cu' _chemical_formula_sum 'C14 H20 Cu N2 O8 S2' _chemical_formula_weight 471.98 _chemical_name_systematic ; Tetraaquabis(4-pyridylthioactetato)copper(II) ; _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall '-P 2yab' _symmetry_space_group_name_H-M 'P 21/a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90 _cell_angle_beta 107.435(2) _cell_angle_gamma 90 _cell_formula_units_Z 2 _cell_length_a 7.4810(10) _cell_length_b 10.453(2) _cell_length_c 12.123(2) _cell_measurement_reflns_used 1559 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 26.4 _cell_measurement_theta_min 2.7 _cell_volume 904.4(3) _computing_cell_refinement 'SAINT (Bruker, 2002)' _computing_data_collection 'SMART (Bruker, 2002)' _computing_data_reduction SAINT _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _diffrn_ambient_temperature 298(2) _diffrn_measured_fraction_theta_full 0.978 _diffrn_measured_fraction_theta_max 0.978 _diffrn_measurement_device_type 'Bruker SMART APEX area-detector' _diffrn_measurement_method '\f and \w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.03 _diffrn_reflns_av_sigmaI/netI 0.046 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 4867 _diffrn_reflns_theta_full 27.05 _diffrn_reflns_theta_max 27.1 _diffrn_reflns_theta_min 1.8 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.49 _exptl_absorpt_correction_T_max 0.929 _exptl_absorpt_correction_T_min 0.529 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_process_details 'SADABS (Bruker, 2002)' _exptl_crystal_colour Blue _exptl_crystal_density_diffrn 1.733 _exptl_crystal_description Prism _exptl_crystal_F_000 486 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.16 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.888 _refine_diff_density_min -0.680 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.196 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 136 _refine_ls_number_reflns 1953 _refine_ls_number_restraints 6 _refine_ls_restrained_S_all 1.194 _refine_ls_R_factor_all 0.0681 _refine_ls_R_factor_gt 0.0590 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0727P)^2^+3.5831P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1811 _refine_ls_wR_factor_ref 0.1859 _reflns_number_gt 1671 _reflns_number_total 1953 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file na6303.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z' '-x, -y, -z' 'x-1/2, -y-1/2, z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu1 0.5000 0.5000 0.5000 0.0206(3) Uani d S 1 Cu S1 0.9169(2) 0.69525(13) 1.03472(11) 0.0298(4) Uani d . 1 S O1 1.0718(6) 0.6958(4) 1.2808(4) 0.0368(10) Uani d . 1 O O2 0.9389(6) 0.5173(5) 1.3214(3) 0.0406(11) Uani d . 1 O O1w 0.5795(6) 0.3165(4) 0.5572(3) 0.0275(8) Uani d D 1 O H1w1 0.513(6) 0.298(6) 0.601(4) 0.033 Uiso d D 1 H H1w2 0.695(2) 0.312(6) 0.595(4) 0.033 Uiso d D 1 H O2w 0.7638(6) 0.5327(5) 0.4895(4) 0.0349(10) Uani d D 1 O H2w1 0.789(9) 0.516(6) 0.427(3) 0.042 Uiso d D 1 H H2w2 0.841(7) 0.496(6) 0.546(3) 0.042 Uiso d D 1 H N1 0.5949(6) 0.5710(4) 0.6698(3) 0.0224(9) Uani d . 1 N C1 0.9664(7) 0.6011(5) 1.2538(4) 0.0273(11) Uani d . 1 C C2 0.8546(8) 0.5812(6) 1.1288(4) 0.0303(12) Uani d . 1 C H2a 0.7222 0.5893 1.1209 0.036 Uiso calc R 1 H H2b 0.8764 0.4953 1.1055 0.036 Uiso calc R 1 H C3 0.6899(8) 0.6815(5) 0.6940(4) 0.0289(12) Uani d . 1 C H3 0.6935 0.7333 0.6323 0.035 Uiso calc R 1 H C4 0.7816(8) 0.7230(5) 0.8033(4) 0.0292(12) Uani d . 1 C H4 0.8438 0.8012 0.8146 0.035 Uiso calc R 1 H C5 0.7809(7) 0.6466(5) 0.8976(4) 0.0220(10) Uani d . 1 C C6 0.6744(7) 0.5334(5) 0.8736(4) 0.0240(10) Uani d . 1 C H6 0.6628 0.4814 0.9333 0.029 Uiso calc R 1 H C7 0.5879(7) 0.5015(5) 0.7605(4) 0.0232(10) Uani d . 1 C H7 0.5194 0.4258 0.7461 0.028 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0240(5) 0.0225(5) 0.0140(4) -0.0002(3) 0.0036(3) 0.0009(3) S1 0.0335(7) 0.0338(7) 0.0179(6) -0.0082(5) 0.0012(5) -0.0037(5) O1 0.037(2) 0.039(2) 0.026(2) 0.0028(18) -0.0015(17) -0.0081(17) O2 0.042(2) 0.061(3) 0.0172(19) 0.002(2) 0.0066(17) 0.0047(19) O1w 0.032(2) 0.0256(19) 0.0211(18) 0.0024(16) 0.0022(15) 0.0047(15) O2w 0.0235(19) 0.055(3) 0.025(2) 0.0010(18) 0.0060(16) 0.0054(19) N1 0.026(2) 0.025(2) 0.0148(19) -0.0032(17) 0.0038(16) -0.0014(16) C1 0.026(3) 0.037(3) 0.017(2) 0.012(2) 0.004(2) -0.003(2) C2 0.033(3) 0.035(3) 0.018(2) -0.001(2) 0.001(2) 0.001(2) C3 0.040(3) 0.028(3) 0.016(2) -0.006(2) 0.003(2) 0.004(2) C4 0.037(3) 0.027(3) 0.021(3) -0.010(2) 0.004(2) -0.001(2) C5 0.021(2) 0.025(2) 0.018(2) 0.0001(19) 0.0018(18) -0.0042(19) C6 0.031(3) 0.023(2) 0.018(2) -0.002(2) 0.008(2) 0.0025(19) C7 0.029(3) 0.018(2) 0.022(2) -0.0032(19) 0.005(2) -0.0013(19) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O1w . 2.066(4) yes Cu1 O1w 3_666 2.066(4) ? Cu1 O2w . 2.044(4) yes Cu1 O2w 3_666 2.044(4) ? Cu1 N1 . 2.101(4) yes Cu1 N1 3_666 2.101(4) ? S1 C5 . 1.745(5) ? S1 C2 . 1.805(6) ? O1 C1 . 1.246(7) ? O2 C1 . 1.258(7) ? O1w H1w1 . 0.85 ? O1w H1w2 . 0.85 ? O2w H2w1 . 0.85 ? O2w H2w2 . 0.85 ? N1 C7 . 1.332(7) ? N1 C3 . 1.342(7) ? C1 C2 . 1.509(7) ? C2 H2a . 0.9700 ? C2 H2b . 0.9700 ? C3 C4 . 1.368(7) ? C3 H3 . 0.9300 ? C4 C5 . 1.397(7) ? C4 H4 . 0.9300 ? C5 C6 . 1.407(7) ? C6 C7 . 1.371(7) ? C6 H6 . 0.9300 ? C7 H7 . 0.9300 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1w Cu1 O1w . 3_666 180 ? O1w Cu1 O2w . . 89.4(2) yes O1w Cu1 O2w . 3_666 90.6(2) yes O1w Cu1 N1 . . 91.2(2) yes O1w Cu1 N1 . 3_666 88.9(2) yes O1w Cu1 O2w 3_666 . 90.6(2) ? O1w Cu1 O2w 3_666 3_666 89.4(2) ? O1w Cu1 N1 3_666 . 88.9(2) ? O1w Cu1 N1 3_666 3_666 91.2(2) ? O2w Cu1 O2w . 3_666 180 ? O2w Cu1 N1 . . 87.3(2) yes O2w Cu1 N1 . 3_666 92.7(2) yes O2w Cu1 N1 3_666 . 92.7(2) ? O2w Cu1 N1 3_666 3_666 87.3(2) ? N1 Cu1 N1 . 3_666 180 ? C5 S1 C2 . . 102.8(3) ? Cu1 O1w H1w1 . . 105 ? Cu1 O1w H1w2 . . 112 ? H1w1 O1w H1w2 . . 110 ? Cu1 O2w H2w1 . . 120 ? Cu1 O2w H2w2 . . 108 ? H2w1 O2w H2w2 . . 111 ? C7 N1 C3 . . 116.0(4) ? C7 N1 Cu1 . . 122.1(3) ? C3 N1 Cu1 . . 121.3(3) ? O1 C1 O2 . . 126.6(5) ? O1 C1 C2 . . 119.3(5) ? O2 C1 C2 . . 114.1(5) ? C1 C2 S1 . . 111.9(4) ? C1 C2 H2a . . 109.2 ? S1 C2 H2a . . 109.2 ? C1 C2 H2b . . 109.2 ? S1 C2 H2b . . 109.2 ? H2a C2 H2b . . 107.9 ? N1 C3 C4 . . 124.3(5) ? N1 C3 H3 . . 117.8 ? C4 C3 H3 . . 117.8 ? C3 C4 C5 . . 119.2(5) ? C3 C4 H4 . . 120.4 ? C5 C4 H4 . . 120.4 ? C4 C5 C6 . . 116.9(4) ? C4 C5 S1 . . 118.0(4) ? C6 C5 S1 . . 125.1(4) ? C7 C6 C5 . . 118.7(5) ? C7 C6 H6 . . 120.7 ? C5 C6 H6 . . 120.7 ? N1 C7 C6 . . 124.7(5) ? N1 C7 H7 . . 117.6 ? C6 C7 H7 . . 117.6 ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion O2w Cu1 N1 C7 3_666 58.3(4) O2w Cu1 N1 C7 . -121.7(4) O1w Cu1 N1 C7 . -32.4(4) O1w Cu1 N1 C7 3_666 147.6(4) O2w Cu1 N1 C3 3_666 -131.3(4) O2w Cu1 N1 C3 . 48.7(4) O1w Cu1 N1 C3 . 138.1(4) O1w Cu1 N1 C3 3_666 -41.9(4) O1 C1 C2 S1 . 6.5(7) O2 C1 C2 S1 . -174.4(4) C5 S1 C2 C1 . 176.7(4) C7 N1 C3 C4 . 2.1(8) Cu1 N1 C3 C4 . -168.9(5) N1 C3 C4 C5 . 0.8(9) C3 C4 C5 C6 . -3.7(8) C3 C4 C5 S1 . 174.2(5) C2 S1 C5 C4 . 174.0(4) C2 S1 C5 C6 . -8.2(5) C4 C5 C6 C7 . 3.7(8) S1 C5 C6 C7 . -174.1(4) C3 N1 C7 C6 . -2.1(8) Cu1 N1 C7 C6 . 168.8(4) C5 C6 C7 N1 . -0.8(8) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O1w H1w2 O1 3_767 0.85 1.94 2.758(6) 163 yes O1w H1w1 O1 2_647 0.85 2.04 2.840(6) 157 yes O2w H2w1 O2 1_554 0.85 1.94 2.738(6) 156 yes O2w H2w2 O2 3_767 0.85 1.93 2.724(6) 156 yes C7 H7 O1 2_647 0.93 2.49 3.395(6) 163 yes