#------------------------------------------------------------------------------ #$Date: 2010-01-30 13:59:17 +0000 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: svn://www.crystallography.net/cod/cif/2/2203522.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203522 loop_ _publ_author_name 'Wang, Li-Wei' 'Chen, Tao' 'Sun, Hong-Xiang' 'Xiong, Yi' 'Zhao, Yu' _publ_section_title ; Kadsuranin: a lignan from the fruit of Schisandra chinensis ; _journal_issue 4 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o513 _journal_page_last o514 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C23 H28 O6' _chemical_formula_moiety 'C23 H28 O6' _chemical_formula_sum 'C23 H28 O6' _chemical_formula_weight 400.45 _chemical_melting_point 392-394 _chemical_name_common Kadsuranin _chemical_name_systematic ; 5,6,7,8-tetrahydro-1,2,3,13-tetramethoxy-6,7- dimethylbenzo[3,4]cycloocta[1,2-f][1,3]benzodioxole ; _symmetry_cell_setting Triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 83.315(2) _cell_angle_beta 70.256(3) _cell_angle_gamma 63.245(2) _cell_formula_units_Z 2 _cell_length_a 10.5346(7) _cell_length_b 10.9409(7) _cell_length_c 11.0568(7) _cell_measurement_reflns_used 642 _cell_measurement_temperature 273(2) _cell_measurement_theta_max 21.98 _cell_measurement_theta_min 2.37 _cell_volume 1070.09(12) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction 'SAINT (Bruker, 2000)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Bruker, 2000)' _diffrn_ambient_temperature 273(2) _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0227 _diffrn_reflns_av_sigmaI/netI 0.0595 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 5758 _diffrn_reflns_theta_full 25.19 _diffrn_reflns_theta_max 25.19 _diffrn_reflns_theta_min 1.96 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.089 _exptl_absorpt_correction_T_max 0.984 _exptl_absorpt_correction_T_min 0.963 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 2000)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.243 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 428 _exptl_crystal_size_max 0.45 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.11 _refine_diff_density_max 0.237 _refine_diff_density_min -0.203 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.101 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 268 _refine_ls_number_reflns 3801 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.101 _refine_ls_R_factor_all 0.1299 _refine_ls_R_factor_gt 0.0831 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0794P)^2^+0.2635P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1776 _refine_ls_wR_factor_ref 0.1964 _reflns_number_gt 2443 _reflns_number_total 3801 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ww6164.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.3652(3) 0.7451(3) 0.8647(3) 0.0679(8) Uani d . 1 O O2 0.5867(3) 0.6873(3) 0.5977(3) 0.0947(11) Uani d . 1 O O3 0.5238(5) 0.6772(4) 0.4202(3) 0.1072(13) Uani d . 1 O O4 -0.2070(3) 0.8199(3) 1.2783(2) 0.0572(7) Uani d . 1 O O5 0.0419(3) 0.5805(3) 1.2019(2) 0.0639(7) Uani d . 1 O O6 0.2430(3) 0.5462(2) 0.9592(2) 0.0546(7) Uani d . 1 O C1 0.3390(4) 0.7252(4) 0.7577(4) 0.0547(10) Uani d . 1 C C2 0.4416(4) 0.6992(4) 0.6378(4) 0.0665(11) Uani d . 1 C C3 0.4034(5) 0.6965(4) 0.5319(4) 0.0764(14) Uani d . 1 C C4 0.2631(6) 0.7169(4) 0.5395(3) 0.0711(12) Uani d . 1 C H4 0.2396 0.7163 0.4658 0.085 Uiso calc R 1 H C5 0.1547(4) 0.7391(4) 0.6628(3) 0.0547(10) Uani d . 1 C C6 -0.0002(4) 0.7598(4) 0.6735(3) 0.0607(11) Uani d . 1 C H6A -0.0454 0.7336 0.7580 0.073 Uiso calc R 1 H H6B 0.0087 0.6995 0.6103 0.073 Uiso calc R 1 H C7 -0.1067(5) 0.9099(4) 0.6530(3) 0.0612(11) Uani d . 1 C H7 -0.0416 0.9487 0.5954 0.073 Uiso calc R 1 H C8 -0.1930(4) 1.0028(4) 0.7754(3) 0.0562(10) Uani d . 1 C H8 -0.2375 1.0962 0.7464 0.067 Uiso calc R 1 H C9 -0.0920(4) 1.0035(3) 0.8485(3) 0.0463(9) Uani d . 1 C H9A -0.0005 1.0012 0.7857 0.056 Uiso calc R 1 H H9B -0.1430 1.0897 0.8978 0.056 Uiso calc R 1 H C10 -0.0488(4) 0.8890(3) 0.9385(3) 0.0381(8) Uani d . 1 C C11 -0.1446(4) 0.9077(4) 1.0650(3) 0.0433(8) Uani d . 1 C H11 -0.2305 0.9903 1.0903 0.052 Uiso calc R 1 H C12 -0.1166(4) 0.8089(4) 1.1531(3) 0.0440(8) Uani d . 1 C C13 0.0135(4) 0.6855(3) 1.1175(3) 0.0442(8) Uani d . 1 C C14 0.1117(4) 0.6661(3) 0.9935(3) 0.0440(8) Uani d . 1 C C15 0.0827(4) 0.7668(3) 0.9026(3) 0.0423(8) Uani d . 1 C C16 0.1935(4) 0.7419(3) 0.7703(3) 0.0491(9) Uani d . 1 C C17 -0.3256(5) 0.9775(5) 0.8650(4) 0.0833(14) Uani d . 1 C H17A -0.2901 0.8831 0.8872 0.125 Uiso calc R 1 H H17B -0.3981 0.9987 0.8220 0.125 Uiso calc R 1 H H17C -0.3715 1.0349 0.9417 0.125 Uiso calc R 1 H C18 -0.2094(6) 0.9133(5) 0.5819(4) 0.0932(15) Uani d . 1 C H18A -0.2677 0.8664 0.6298 0.140 Uiso calc R 1 H H18B -0.1499 0.8690 0.4984 0.140 Uiso calc R 1 H H18C -0.2755 1.0067 0.5729 0.140 Uiso calc R 1 H C19 0.6475(7) 0.6364(5) 0.4670(6) 0.118(2) Uani d . 1 C H19A 0.7152 0.6743 0.4158 0.142 Uiso calc R 1 H H19B 0.7028 0.5373 0.4624 0.142 Uiso calc R 1 H C20 0.5053(5) 0.6533(5) 0.8820(5) 0.1006(17) Uani d . 1 C H20A 0.5320 0.5620 0.8555 0.151 Uiso calc R 1 H H20B 0.4965 0.6555 0.9711 0.151 Uiso calc R 1 H H20C 0.5815 0.6805 0.8311 0.151 Uiso calc R 1 H C21 -0.3434(4) 0.9408(4) 1.3171(4) 0.0727(12) Uani d . 1 C H21A -0.3222 1.0181 1.3128 0.109 Uiso calc R 1 H H21B -0.4003 0.9334 1.4038 0.109 Uiso calc R 1 H H21C -0.4003 0.9528 1.2611 0.109 Uiso calc R 1 H C22 0.1011(5) 0.5964(5) 1.2926(4) 0.0927(16) Uani d . 1 C H22A 0.1898 0.6089 1.2486 0.139 Uiso calc R 1 H H22B 0.1260 0.5160 1.3424 0.139 Uiso calc R 1 H H22C 0.0278 0.6749 1.3485 0.139 Uiso calc R 1 H C23 0.2282(5) 0.4368(4) 0.9192(4) 0.0784(13) Uani d . 1 C H23A 0.1661 0.4090 0.9908 0.118 Uiso calc R 1 H H23B 0.3256 0.3611 0.8871 0.118 Uiso calc R 1 H H23C 0.1829 0.4659 0.8524 0.118 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0446(16) 0.0691(19) 0.087(2) -0.0203(14) -0.0208(14) -0.0086(15) O2 0.0570(19) 0.076(2) 0.118(3) -0.0322(17) 0.0176(19) -0.0022(19) O3 0.108(3) 0.088(3) 0.075(2) -0.043(2) 0.032(2) -0.0013(18) O4 0.0550(16) 0.0655(18) 0.0378(13) -0.0218(14) -0.0062(12) 0.0027(12) O5 0.0824(19) 0.0564(17) 0.0510(14) -0.0259(15) -0.0302(14) 0.0163(13) O6 0.0480(15) 0.0438(15) 0.0656(16) -0.0123(13) -0.0201(12) -0.0031(12) C1 0.048(2) 0.042(2) 0.062(2) -0.0196(18) -0.004(2) -0.0012(18) C2 0.056(3) 0.046(2) 0.078(3) -0.023(2) 0.002(2) 0.005(2) C3 0.072(3) 0.055(3) 0.064(3) -0.027(2) 0.023(3) -0.002(2) C4 0.099(4) 0.059(3) 0.038(2) -0.032(3) -0.005(2) 0.0024(18) C5 0.070(3) 0.048(2) 0.047(2) -0.029(2) -0.016(2) 0.0039(17) C6 0.090(3) 0.068(3) 0.045(2) -0.044(2) -0.034(2) 0.0072(19) C7 0.081(3) 0.070(3) 0.047(2) -0.041(2) -0.031(2) 0.017(2) C8 0.057(2) 0.063(3) 0.053(2) -0.024(2) -0.029(2) 0.0140(19) C9 0.047(2) 0.042(2) 0.0480(19) -0.0186(17) -0.0148(17) 0.0018(16) C10 0.0413(19) 0.046(2) 0.0368(18) -0.0249(18) -0.0164(16) 0.0038(15) C11 0.0386(19) 0.046(2) 0.047(2) -0.0192(17) -0.0153(17) 0.0003(17) C12 0.047(2) 0.052(2) 0.0398(19) -0.0255(19) -0.0159(17) 0.0016(17) C13 0.049(2) 0.043(2) 0.046(2) -0.0214(18) -0.0215(18) 0.0079(17) C14 0.039(2) 0.045(2) 0.052(2) -0.0181(18) -0.0185(17) -0.0018(17) C15 0.041(2) 0.048(2) 0.0420(19) -0.0204(18) -0.0168(16) 0.0010(17) C16 0.048(2) 0.044(2) 0.050(2) -0.0215(18) -0.0084(18) -0.0002(17) C17 0.061(3) 0.135(4) 0.067(3) -0.048(3) -0.032(2) 0.015(3) C18 0.109(4) 0.108(4) 0.078(3) -0.039(3) -0.060(3) 0.002(3) C19 0.082(4) 0.070(4) 0.133(5) -0.032(3) 0.046(4) 0.004(3) C20 0.051(3) 0.108(4) 0.130(4) -0.020(3) -0.037(3) 0.012(3) C21 0.059(3) 0.075(3) 0.055(2) -0.016(2) -0.001(2) -0.002(2) C22 0.087(3) 0.094(4) 0.074(3) -0.005(3) -0.049(3) 0.007(3) C23 0.085(3) 0.049(3) 0.099(3) -0.016(2) -0.039(3) -0.015(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 1.363(4) y O1 C20 1.426(5) y O2 C2 1.388(5) y O2 C19 1.431(6) y O3 C3 1.393(5) y O3 C19 1.430(7) y O4 C12 1.372(4) y O4 C21 1.416(4) y O5 C13 1.382(4) y O5 C22 1.408(5) y O6 C14 1.380(4) y O6 C23 1.411(4) y C1 C2 1.359(5) ? C1 C16 1.419(5) y C2 C3 1.368(6) ? C3 C4 1.365(6) ? C4 C5 1.414(5) ? C4 H4 0.9300 ? C5 C16 1.389(5) ? C5 C6 1.507(5) ? C6 C7 1.559(5) ? C6 H6A 0.9700 ? C6 H6B 0.9700 ? C7 C18 1.524(5) ? C7 C8 1.532(5) ? C7 H7 0.9800 ? C8 C17 1.536(5) ? C8 C9 1.542(5) ? C8 H8 0.9800 ? C9 C10 1.507(4) ? C9 H9A 0.9700 ? C9 H9B 0.9700 ? C10 C11 1.394(4) ? C10 C15 1.396(4) ? C11 C12 1.366(4) ? C11 H11 0.9300 ? C12 C13 1.396(5) ? C13 C14 1.381(4) ? C14 C15 1.401(4) ? C15 C16 1.493(4) y C17 H17A 0.9600 ? C17 H17B 0.9600 ? C17 H17C 0.9600 ? C18 H18A 0.9600 ? C18 H18B 0.9600 ? C18 H18C 0.9600 ? C19 H19A 0.9700 ? C19 H19B 0.9700 ? C20 H20A 0.9600 ? C20 H20B 0.9600 ? C20 H20C 0.9600 ? C21 H21A 0.9600 ? C21 H21B 0.9600 ? C21 H21C 0.9600 ? C22 H22A 0.9600 ? C22 H22B 0.9600 ? C22 H22C 0.9600 ? C23 H23A 0.9600 ? C23 H23B 0.9600 ? C23 H23C 0.9600 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 O1 C20 117.9(3) y C2 O2 C19 104.0(4) y C3 O3 C19 103.3(4) y C12 O4 C21 117.2(3) y C13 O5 C22 114.5(3) y C14 O6 C23 114.3(3) y C2 C1 O1 123.6(4) y C2 C1 C16 117.9(4) ? O1 C1 C16 118.3(3) ? C1 C2 C3 121.1(4) ? C1 C2 O2 129.7(5) y C3 C2 O2 108.9(4) y C4 C3 C2 122.7(4) ? C4 C3 O3 126.8(5) y C2 C3 O3 110.3(5) y C3 C4 C5 118.0(4) ? C3 C4 H4 121.0 ? C5 C4 H4 121.0 ? C16 C5 C4 119.2(4) ? C16 C5 C6 122.0(3) ? C4 C5 C6 118.9(4) ? C5 C6 C7 113.9(3) ? C5 C6 H6A 108.8 ? C7 C6 H6A 108.8 ? C5 C6 H6B 108.8 ? C7 C6 H6B 108.8 ? H6A C6 H6B 107.7 ? C18 C7 C8 112.5(3) ? C18 C7 C6 111.3(3) ? C8 C7 C6 114.4(3) ? C18 C7 H7 106.0 ? C8 C7 H7 106.0 ? C6 C7 H7 106.0 ? C7 C8 C17 113.4(3) ? C7 C8 C9 113.8(3) ? C17 C8 C9 111.7(3) ? C7 C8 H8 105.7 ? C17 C8 H8 105.7 ? C9 C8 H8 105.7 ? C10 C9 C8 116.7(3) ? C10 C9 H9A 108.1 ? C8 C9 H9A 108.1 ? C10 C9 H9B 108.1 ? C8 C9 H9B 108.1 ? H9A C9 H9B 107.3 ? C11 C10 C15 118.5(3) ? C11 C10 C9 117.9(3) ? C15 C10 C9 123.6(3) ? C12 C11 C10 122.2(3) ? C12 C11 H11 118.9 ? C10 C11 H11 118.9 ? C11 C12 O4 125.2(3) y C11 C12 C13 119.6(3) ? O4 C12 C13 115.2(3) ? C14 C13 O5 119.6(3) y C14 C13 C12 119.1(3) ? O5 C13 C12 121.3(3) y O6 C14 C13 119.2(3) y O6 C14 C15 119.3(3) y C13 C14 C15 121.5(3) ? C10 C15 C14 119.0(3) ? C10 C15 C16 121.5(3) ? C14 C15 C16 119.4(3) ? C5 C16 C1 121.0(3) ? C5 C16 C15 121.4(3) ? C1 C16 C15 117.7(3) ? C8 C17 H17A 109.5 ? C8 C17 H17B 109.5 ? H17A C17 H17B 109.5 ? C8 C17 H17C 109.5 ? H17A C17 H17C 109.5 ? H17B C17 H17C 109.5 ? C7 C18 H18A 109.5 ? C7 C18 H18B 109.5 ? H18A C18 H18B 109.5 ? C7 C18 H18C 109.5 ? H18A C18 H18C 109.5 ? H18B C18 H18C 109.5 ? O3 C19 O2 107.1(4) y O3 C19 H19A 110.3 ? O2 C19 H19A 110.3 ? O3 C19 H19B 110.3 ? O2 C19 H19B 110.3 ? H19A C19 H19B 108.5 ? O1 C20 H20A 109.5 ? O1 C20 H20B 109.5 ? H20A C20 H20B 109.5 ? O1 C20 H20C 109.5 ? H20A C20 H20C 109.5 ? H20B C20 H20C 109.5 ? O4 C21 H21A 109.5 ? O4 C21 H21B 109.5 ? H21A C21 H21B 109.5 ? O4 C21 H21C 109.5 ? H21A C21 H21C 109.5 ? H21B C21 H21C 109.5 ? O5 C22 H22A 109.5 ? O5 C22 H22B 109.5 ? H22A C22 H22B 109.5 ? O5 C22 H22C 109.5 ? H22A C22 H22C 109.5 ? H22B C22 H22C 109.5 ? O6 C23 H23A 109.5 ? O6 C23 H23B 109.5 ? H23A C23 H23B 109.5 ? O6 C23 H23C 109.5 ? H23A C23 H23C 109.5 ? H23B C23 H23C 109.5 ? _cod_database_code 2203522