#------------------------------------------------------------------------------ #$Date: 2012-02-03 17:16:24 +0000 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/36/2203631.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203631 loop_ _publ_author_name 'Tooke, Duncan M.' 'Spek, Anthony L.' 'Reedijk, Jan' 'Kannappan, Ramu' _publ_section_title ; (2-Pyridylmethyl)ammonium nitrate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o911 _journal_page_last o912 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C6 H9 N2 +, N O3 -' _chemical_formula_moiety 'C6 H9 N2 +, N O3 -' _chemical_formula_sum 'C6 H9 N3 O3' _chemical_formula_weight 171.16 _chemical_name_systematic ; ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens mixed _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 105.171(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.2492(4) _cell_length_b 10.4014(5) _cell_length_c 9.3850(5) _cell_measurement_reflns_used 59 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 20.810 _cell_measurement_theta_min 5.498 _cell_volume 777.20(7) _computing_cell_refinement 'DIRAX (Duisenberg, 1992)' _computing_data_collection 'COLLECT (Nonius, 1998)' _computing_data_reduction 'EvalCCD (Duisenberg et al, 2003)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'PLATON ' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-6 (Sheldrick, 1985)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Nonius KappaCCD' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0565 _diffrn_reflns_av_sigmaI/netI 0.0339 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 18148 _diffrn_reflns_theta_full 27.44 _diffrn_reflns_theta_max 27.44 _diffrn_reflns_theta_min 2.56 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.119 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.463 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 360 _exptl_crystal_size_max 0.2 _exptl_crystal_size_mid 0.1 _exptl_crystal_size_min 0.1 _refine_diff_density_max 0.188 _refine_diff_density_min -0.227 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.052 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 118 _refine_ls_number_reflns 1774 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.052 _refine_ls_R_factor_all 0.0777 _refine_ls_R_factor_gt 0.0429 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0364P)^2^+0.3509P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0847 _refine_ls_wR_factor_ref 0.0972 _reflns_number_gt 1228 _reflns_number_total 1774 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file lh6211.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_database_code 2203631 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y+1/2, z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.30006(17) 0.43664(13) 0.09967(14) 0.0227(3) Uani d . 1 N N2 0.52094(18) 0.32680(14) -0.02714(16) 0.0212(3) Uani d . 1 N H2A 0.502(2) 0.4097(19) -0.073(2) 0.032 Uiso d . 1 H H2B 0.590(2) 0.2819(18) -0.073(2) 0.032 Uiso d . 1 H H2C 0.578(2) 0.3381(17) 0.073(2) 0.032 Uiso d . 1 H C1 0.2010(2) 0.49371(18) 0.17383(18) 0.0270(4) Uani d . 1 C H1 0.2345 0.5751 0.2176 0.032 Uiso calc R 1 H C2 0.0542(2) 0.44125(18) 0.19013(19) 0.0295(4) Uani d . 1 C H2 -0.0119 0.4854 0.2435 0.035 Uiso calc R 1 H C3 0.0050(2) 0.32320(19) 0.12727(19) 0.0314(4) Uani d . 1 C H3 -0.0961 0.2844 0.1363 0.038 Uiso calc R 1 H C4 0.1047(2) 0.26232(18) 0.05104(18) 0.0272(4) Uani d . 1 C H4 0.0739 0.1807 0.0069 0.033 Uiso calc R 1 H C5 0.2507(2) 0.32224(16) 0.03990(17) 0.0210(4) Uani d . 1 C C6 0.3627(2) 0.25603(16) -0.04054(18) 0.0248(4) Uani d . 1 C H6A 0.3888 0.1683 0.0000 0.030 Uiso calc R 1 H H6B 0.3025 0.2479 -0.1462 0.030 Uiso calc R 1 H O1 0.66629(15) 0.31660(11) 0.28255(12) 0.0263(3) Uani d . 1 O O2 0.68263(16) 0.52342(12) 0.26607(14) 0.0349(3) Uani d . 1 O O3 0.7063(2) 0.43410(13) 0.47739(14) 0.0455(4) Uani d . 1 O N3 0.68525(17) 0.42684(14) 0.34289(15) 0.0249(3) Uani d . 1 N loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0275(8) 0.0202(7) 0.0217(7) 0.0009(6) 0.0089(6) 0.0011(6) N2 0.0266(8) 0.0185(8) 0.0211(8) 0.0002(6) 0.0105(6) -0.0023(6) C1 0.0340(10) 0.0246(9) 0.0245(9) 0.0058(8) 0.0116(7) 0.0019(7) C2 0.0279(10) 0.0372(11) 0.0264(9) 0.0110(8) 0.0124(8) 0.0062(8) C3 0.0206(9) 0.0426(11) 0.0311(10) -0.0001(8) 0.0072(7) 0.0095(9) C4 0.0253(9) 0.0281(10) 0.0260(9) -0.0034(8) 0.0028(7) 0.0020(8) C5 0.0238(8) 0.0205(8) 0.0178(8) 0.0020(7) 0.0036(6) 0.0038(7) C6 0.0291(9) 0.0205(9) 0.0264(9) -0.0036(7) 0.0103(7) -0.0029(7) O1 0.0348(7) 0.0205(6) 0.0253(6) -0.0015(5) 0.0110(5) -0.0025(5) O2 0.0394(8) 0.0256(7) 0.0358(7) -0.0061(6) 0.0031(6) 0.0124(6) O3 0.0800(11) 0.0351(8) 0.0205(7) -0.0064(7) 0.0118(7) -0.0032(6) N3 0.0243(8) 0.0248(8) 0.0253(8) -0.0015(6) 0.0061(6) 0.0029(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C5 1.333(2) N1 C1 1.342(2) N2 C6 1.475(2) N2 H2A 0.96(2) N2 H2B 0.93(2) N2 H2C 0.94(2) C1 C2 1.373(2) C1 H1 0.9500 C2 C3 1.377(3) C2 H2 0.9500 C3 C4 1.378(2) C3 H3 0.9500 C4 C5 1.384(2) C4 H4 0.9500 C5 C6 1.505(2) C6 H6A 0.9900 C6 H6B 0.9900 O1 N3 1.2703(18) O2 N3 1.2334(17) O3 N3 1.2307(18) loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C5 N1 C1 116.90(15) C6 N2 H2A 111.9(11) C6 N2 H2B 110.3(11) H2A N2 H2B 107.1(15) C6 N2 H2C 110.6(11) H2A N2 H2C 108.5(16) H2B N2 H2C 108.4(16) N1 C1 C2 123.81(17) N1 C1 H1 118.1 C2 C1 H1 118.1 C1 C2 C3 118.46(16) C1 C2 H2 120.8 C3 C2 H2 120.8 C2 C3 C4 118.90(17) C2 C3 H3 120.6 C4 C3 H3 120.6 C3 C4 C5 118.82(17) C3 C4 H4 120.6 C5 C4 H4 120.6 N1 C5 C4 123.12(15) N1 C5 C6 117.35(14) C4 C5 C6 119.52(15) N2 C6 C5 112.02(14) N2 C6 H6A 109.2 C5 C6 H6A 109.2 N2 C6 H6B 109.2 C5 C6 H6B 109.2 H6A C6 H6B 107.9 O3 N3 O2 121.72(15) O3 N3 O1 118.72(14) O2 N3 O1 119.56(13) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2A O2 3_665 0.958(19) 2.155(18) 2.8817(19) 131.7(15) yes N2 H2A N1 3_665 0.958(19) 2.345(18) 3.037(2) 128.7(13) yes N2 H2B O1 4_554 0.925(18) 1.931(18) 2.8237(19) 161.4(16) yes N2 H2B O3 4_554 0.925(18) 2.440(19) 3.110(2) 129.3(15) yes N2 H2C O1 . 0.942(18) 1.923(18) 2.8412(18) 164.3(16) yes