#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/36/2203673.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203673 loop_ _publ_author_name 'Xu, Ying' 'Han, Lei' 'Lou, Ben-Yong' 'Hong, Mao-Chun' _publ_section_title ; Diaquabis(pyridine-2,5-dicarboxylato)cobalt(II) ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m585 _journal_page_last m586 _journal_paper_doi 10.1107/S1600536804008426 _journal_volume 60 _journal_year 2004 _chemical_formula_moiety 'C14 H12 Co N2 O10' _chemical_formula_sum 'C14 H12 Co N2 O10' _chemical_formula_weight 427.19 _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method CrystalClearVersion1.3 _cell_angle_alpha 94.71(3) _cell_angle_beta 98.50(3) _cell_angle_gamma 110.185(16) _cell_formula_units_Z 1 _cell_length_a 5.06990(10) _cell_length_b 6.61840(10) _cell_length_c 12.3638(7) _cell_measurement_reflns_used 792 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25.02 _cell_measurement_theta_min 1.68 _cell_volume 381.13(7) _computing_cell_refinement CrystalClear _computing_data_collection 'CrystalClear (Rigaku, 2000)' _computing_data_reduction CrystalClear _computing_molecular_graphics 'SHELXTL (Bruker, 1997)' _computing_publication_material 'SHELXL97 (Sheldrick, 1997)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Siemens, 1994)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.987 _diffrn_measured_fraction_theta_max 0.987 _diffrn_measurement_device_type 'Rigaku Mercury CCD' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0263 _diffrn_reflns_av_sigmaI/netI 0.0498 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -4 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 2356 _diffrn_reflns_theta_full 25.02 _diffrn_reflns_theta_max 25.02 _diffrn_reflns_theta_min 1.68 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.192 _exptl_absorpt_correction_T_max 0.960 _exptl_absorpt_correction_T_min 0.764 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(CrystalClear; Rigaku, 2000)' _exptl_crystal_colour 'light yellow' _exptl_crystal_density_diffrn 1.861 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 217 _exptl_crystal_size_max .20 _exptl_crystal_size_mid .10 _exptl_crystal_size_min .03 _refine_diff_density_max 0.380 _refine_diff_density_min -0.386 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.197 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 132 _refine_ls_number_reflns 1319 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.197 _refine_ls_R_factor_all 0.0504 _refine_ls_R_factor_gt 0.0390 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0636P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0935 _refine_ls_wR_factor_ref 0.1236 _reflns_number_gt 1152 _reflns_number_total 1319 _reflns_threshold_expression I>2\s(I) _cod_data_source_file wn6228.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 381.12(4) _cod_database_code 2203673 _cod_database_fobs_code 2203673 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Co1 0.5000 1.0000 0.5000 0.0236(3) Uani d S 1 Co O1 -0.3538(7) 0.8131(5) -0.0009(2) 0.0436(9) Uani d . 1 O O2 -0.2923(7) 1.0708(5) 0.1390(2) 0.0429(9) Uani d . 1 O H2 -0.4027 1.1034 0.0947 0.064 Uiso calc R 1 H O3 0.5986(7) 0.4807(5) 0.3324(2) 0.0343(7) Uani d . 1 O O4 0.6516(6) 0.7543(4) 0.4621(2) 0.0275(7) Uani d . 1 O O5 0.8235(7) 1.2190(5) 0.4357(3) 0.0316(7) Uani d . 1 O H51 0.786(11) 1.311(8) 0.410(4) 0.045(16) Uiso d . 1 H H52 0.986(12) 1.256(8) 0.462(4) 0.038(15) Uiso d . 1 H N1 0.2723(7) 0.8731(5) 0.3351(2) 0.0234(7) Uani d . 1 N C1 0.0915(9) 0.9390(6) 0.2703(3) 0.0253(9) Uani d . 1 C H1 0.0602 1.0633 0.2960 0.030 Uiso calc R 1 H C2 -0.0496(8) 0.8292(6) 0.1668(3) 0.0243(9) Uani d . 1 C C3 -0.0115(9) 0.6408(7) 0.1295(3) 0.0322(10) Uani d . 1 C H3 -0.1126 0.5602 0.0614 0.039 Uiso calc R 1 H C4 0.1793(10) 0.5741(7) 0.1948(3) 0.0306(10) Uani d . 1 C H4 0.2129 0.4498 0.1708 0.037 Uiso calc R 1 H C5 0.3182(9) 0.6948(6) 0.2958(3) 0.0238(9) Uani d . 1 C C6 -0.2471(9) 0.9055(6) 0.0939(3) 0.0276(9) Uani d . 1 C C7 0.5411(8) 0.6358(6) 0.3693(3) 0.0242(9) Uani d . 1 C loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Co1 0.0234(5) 0.0269(5) 0.0213(4) 0.0138(3) -0.0037(3) 0.0020(3) O1 0.055(2) 0.054(2) 0.0256(16) 0.0347(18) -0.0138(15) -0.0007(14) O2 0.050(2) 0.0451(19) 0.0390(17) 0.0334(17) -0.0121(15) -0.0004(15) O3 0.043(2) 0.0365(17) 0.0332(15) 0.0291(15) 0.0023(14) 0.0051(13) O4 0.0274(16) 0.0347(16) 0.0240(14) 0.0201(13) -0.0049(12) 0.0027(12) O5 0.0244(19) 0.0338(18) 0.0397(18) 0.0158(15) -0.0016(14) 0.0131(14) N1 0.0224(18) 0.0260(17) 0.0242(16) 0.0133(14) 0.0001(13) 0.0046(13) C1 0.026(2) 0.027(2) 0.026(2) 0.0158(18) 0.0003(17) 0.0029(16) C2 0.022(2) 0.029(2) 0.024(2) 0.0136(18) 0.0001(16) 0.0042(16) C3 0.034(3) 0.040(2) 0.021(2) 0.020(2) -0.0073(18) -0.0048(17) C4 0.036(3) 0.029(2) 0.029(2) 0.019(2) -0.0023(18) -0.0014(17) C5 0.025(2) 0.028(2) 0.0209(19) 0.0144(18) 0.0008(16) 0.0049(16) C6 0.028(2) 0.035(2) 0.022(2) 0.0157(19) 0.0005(17) 0.0052(17) C7 0.022(2) 0.029(2) 0.025(2) 0.0122(18) 0.0032(17) 0.0081(17) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O4 Co1 O4 . 2_676 180 yes O4 Co1 O5 . 2_676 89.55(12) yes O4 Co1 O5 2_676 2_676 90.45(12) no O4 Co1 O5 . . 90.45(12) yes O4 Co1 O5 2_676 . 89.55(12) no O5 Co1 O5 2_676 . 180 yes O4 Co1 N1 . 2_676 101.17(11) yes O4 Co1 N1 2_676 2_676 78.83(11) no O5 Co1 N1 2_676 2_676 88.59(13) no O5 Co1 N1 . 2_676 91.41(13) yes O4 Co1 N1 . . 78.83(11) yes O4 Co1 N1 2_676 . 101.17(11) no O5 Co1 N1 2_676 . 91.41(13) no O5 Co1 N1 . . 88.59(13) yes N1 Co1 N1 2_676 . 180 yes C6 O2 O1 . 2_475 111.4(2) ? C6 O2 H2 . . 109.5 ? O1 O2 H2 2_475 . 1.9 ? C7 O4 Co1 . . 116.8(2) ? Co1 O5 O3 . 1_565 107.48(16) ? Co1 O5 O4 . 2_776 111.25(14) ? O3 O5 O4 1_565 2_776 136.74(15) ? Co1 O5 H51 . . 116(4) ? O3 O5 H51 1_565 . 11(4) ? O4 O5 H51 2_776 . 126(4) ? Co1 O5 H52 . . 123(4) ? O3 O5 H52 1_565 . 123(3) ? O4 O5 H52 2_776 . 14(3) ? H51 O5 H52 . . 112(5) ? C1 N1 C5 . . 118.0(3) ? C1 N1 Co1 . . 130.1(3) ? C5 N1 Co1 . . 111.8(2) ? N1 C1 C2 . . 122.2(3) ? N1 C1 H1 . . 118.9 ? C2 C1 H1 . . 118.9 ? C1 C2 C3 . . 119.3(3) no C1 C2 C6 . . 122.1(3) ? C3 C2 C6 . . 118.6(3) ? C2 C3 C4 . . 118.9(4) ? C2 C3 H3 . . 120.6 ? C4 C3 H3 . . 120.6 ? C5 C4 C3 . . 118.6(4) ? C5 C4 H4 . . 120.7 ? C3 C4 H4 . . 120.7 ? N1 C5 C4 . . 122.9(3) no N1 C5 C7 . . 116.0(3) ? C4 C5 C7 . . 121.1(3) ? O1 C6 O2 . . 124.8(4) no O1 C6 C2 . . 120.5(4) ? O2 C6 C2 . . 114.7(3) ? O3 C7 O4 . . 126.6(4) no O3 C7 C5 . . 117.2(3) ? O4 C7 C5 . . 116.2(3) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Co1 O4 . 2.074(2) yes Co1 O4 2_676 2.074(2) . Co1 O5 2_676 2.088(3) . Co1 O5 . 2.088(3) yes Co1 N1 2_676 2.132(3) . Co1 N1 . 2.132(3) yes O1 C6 . 1.228(5) ? O2 C6 . 1.293(5) no O2 O1 2_475 2.643(4) ? O2 H2 . 0.8200 ? O3 C7 . 1.231(5) ? O4 C7 . 1.266(5) yes O5 O3 1_565 2.688(4) ? O5 O4 2_776 2.712(4) ? O5 H51 . 0.78(5) ? O5 H52 . 0.78(5) ? N1 C1 . 1.338(5) no N1 C5 . 1.346(5) yes C1 C2 . 1.376(5) ? C1 H1 . 0.9300 ? C2 C3 . 1.379(5) ? C2 C6 . 1.493(5) no C3 C4 . 1.380(6) ? C3 H3 . 0.9300 ? C4 C5 . 1.373(5) ? C4 H4 . 0.9300 ? C5 C7 . 1.521(5) yes loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O2 H2 O1 2_475 0.82 1.82 2.643(4) 177 O5 H51 O3 1_565 0.78(5) 1.93(5) 2.688(4) 165(5) O5 H52 O4 2_776 0.78(5) 1.96(5) 2.712(4) 160(5) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 168308589