#------------------------------------------------------------------------------ #$Date: 2008-03-30 11:21:05 +0100 (Sun, 30 Mar 2008) $ #$Revision: 321 $ #$URL: svn://www.crystallography.net/cod/cif/2/2203674.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203674 loop_ _publ_author_name 'A-Qing Wu' 'Guang-Hua Guo' 'Fa-Kun Zheng' 'Guo-Cong Guo' 'Jin-Shun Huang' _publ_section_title ; bis(urea-\kO)Bis(picolinato-\k^2^N,O)bis(urea-\kO)nickel(II) urea disolvate monohydrate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m571 _journal_page_last m573 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Ni (C6 H4 N O2)2 (C H4 N2 O)2], 2C H4 N2 O, H2 O' _chemical_formula_moiety 'C14 H16 N6 Ni O6, 2C H4 N2 O, H2 O' _chemical_formula_sum 'C16 H26 N10 Ni O9' _chemical_formula_weight 561.18 _chemical_name_systematic ; ; _symmetry_cell_setting Orthorhombic _symmetry_space_group_name_H-M 'P n m a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.4562(5) _cell_length_b 20.3619(14) _cell_length_c 15.8017(10) _cell_measurement_reflns_used 3906 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25.05 _cell_measurement_theta_min 3.02 _cell_volume 2399.1(3) _computing_cell_refinement 'SMART and SAINT (Siemens, 1994)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction 'XPREP in SHELXTL (Siemens, 1994)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution SHELXTL _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'Siemens SMART CCD' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0362 _diffrn_reflns_av_sigmaI/netI 0.0321 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 24 _diffrn_reflns_limit_k_min -18 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 7104 _diffrn_reflns_theta_full 25.05 _diffrn_reflns_theta_max 25.05 _diffrn_reflns_theta_min 3.02 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.877 _exptl_absorpt_correction_T_max 0.803 _exptl_absorpt_correction_T_min 0.583 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour 'pale blue' _exptl_crystal_density_diffrn 1.554 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 1168 _exptl_crystal_size_max 0.42 _exptl_crystal_size_mid 0.38 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.228 _refine_diff_density_min -0.272 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.012 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 187 _refine_ls_number_reflns 2167 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.012 _refine_ls_R_factor_all 0.0690 _refine_ls_R_factor_gt 0.0418 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0391P)^2^+4.0512P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0918 _refine_ls_wR_factor_ref 0.1090 _reflns_number_gt 1564 _reflns_number_total 2167 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file wn6231.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z' 'x+1/2, -y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z' '-x-1/2, y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Ni1 0.5000 0.5000 -0.5000 0.03140(10) Uani d S 1 Ni N2 1.0168(3) 0.40515(11) -0.49250(14) 0.0509(6) Uani d . 1 N H2A 1.0840 0.4391 -0.4860 0.061 Uiso calc R 1 H H2B 1.0636 0.3665 -0.4932 0.061 Uiso calc R 1 H O1 0.7718(2) 0.46854(7) -0.50045(10) 0.0373(4) Uani d . 1 O N1 0.7445(3) 0.35788(10) -0.51424(15) 0.0565(7) Uani d . 1 N H1A 0.6306 0.3606 -0.5222 0.068 Uiso calc R 1 H H1B 0.7963 0.3202 -0.5145 0.068 Uiso calc R 1 H C1 0.8408(3) 0.41231(11) -0.50144(14) 0.0362(6) Uani d . 1 C O11 0.6232(3) 0.64791(9) -0.65844(12) 0.0655(6) Uani d . 1 O O12 0.5905(2) 0.58854(7) -0.54174(9) 0.0359(4) Uani d . 1 O N11 0.4842(2) 0.48409(9) -0.62809(12) 0.0367(5) Uani d . 1 N C11 0.5876(3) 0.59598(11) -0.62147(15) 0.0407(6) Uani d . 1 C C12 0.5330(3) 0.53724(12) -0.67318(14) 0.0379(6) Uani d . 1 C C13 0.5346(4) 0.53706(13) -0.76025(16) 0.0520(7) Uani d . 1 C H13A 0.5675 0.5745 -0.7901 0.062 Uiso calc R 1 H C14 0.4865(4) 0.48050(16) -0.80267(18) 0.0626(9) Uani d . 1 C H14A 0.4881 0.4793 -0.8615 0.075 Uiso calc R 1 H C15 0.4364(4) 0.42598(14) -0.75717(17) 0.0588(8) Uani d . 1 C H15A 0.4035 0.3875 -0.7847 0.071 Uiso calc R 1 H C16 0.4356(4) 0.42939(12) -0.66985(16) 0.0474(7) Uani d . 1 C H16A 0.4004 0.3927 -0.6390 0.057 Uiso calc R 1 H O21 0.7111(4) 0.7500 -0.23655(18) 0.0736(10) Uani d S 1 O N21 0.8593(5) 0.7500 -0.3613(2) 0.0756(12) Uani d S 1 N H21A 0.9619 0.7500 -0.3365 0.091 Uiso calc SR 1 H H21B 0.8535 0.7500 -0.4157 0.091 Uiso calc SR 1 H N22 0.5522(5) 0.7500 -0.3572(2) 0.0637(11) Uani d S 1 N H22A 0.4520 0.7500 -0.3303 0.076 Uiso calc SR 1 H H22B 0.5529 0.7500 -0.4117 0.076 Uiso calc SR 1 H C21 0.7064(6) 0.7500 -0.3147(3) 0.0553(11) Uani d S 1 C O31 0.0379(3) 0.7500 -0.55338(14) 0.0467(7) Uani d S 1 O N31 0.2038(8) 0.7150(3) -0.6644(3) 0.0860(19) Uani d P 0.50 N H31A 0.2739 0.6932 -0.6317 0.103 Uiso calc PR 0.50 H H31B 0.2216 0.7150 -0.7182 0.103 Uiso calc PR 0.50 H N32 -0.0456(7) 0.7826(2) -0.6841(3) 0.0661(15) Uani d P 0.50 N H32A -0.1358 0.8042 -0.6647 0.079 Uiso calc PR 0.50 H H32B -0.0252 0.7819 -0.7377 0.079 Uiso calc PR 0.50 H C31 0.0634(6) 0.7500 -0.6308(3) 0.0587(12) Uani d S 1 C O1W 0.5744(5) 0.7500 -0.53977(19) 0.0709(9) Uani d SD 1 O H1C 0.607(3) 0.7114(6) -0.5698(12) 0.085 Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 0.03151(19) 0.02755(18) 0.03513(19) -0.00091(18) -0.00072(19) 0.00035(17) N2 0.0328(10) 0.0386(10) 0.0813(15) 0.0044(9) -0.0054(11) 0.0028(11) O1 0.0303(7) 0.0293(7) 0.0523(9) 0.0006(7) -0.0010(8) 0.0040(8) N1 0.0371(11) 0.0304(10) 0.1019(18) 0.0009(9) -0.0025(12) -0.0052(12) C1 0.0380(12) 0.0307(11) 0.0399(12) 0.0020(10) 0.0008(11) 0.0054(11) O11 0.1033(16) 0.0403(9) 0.0529(11) -0.0157(10) -0.0007(11) 0.0120(9) O12 0.0368(8) 0.0312(8) 0.0397(8) -0.0038(7) -0.0004(7) 0.0008(7) N11 0.0358(10) 0.0363(10) 0.0380(10) -0.0001(9) -0.0047(9) -0.0004(8) C11 0.0393(13) 0.0353(12) 0.0475(13) 0.0026(11) -0.0011(12) 0.0036(11) C12 0.0355(13) 0.0391(12) 0.0389(12) 0.0052(10) -0.0022(10) 0.0007(11) C13 0.0617(17) 0.0529(15) 0.0414(13) 0.0015(13) -0.0012(13) 0.0064(13) C14 0.074(2) 0.0736(19) 0.0405(14) 0.0060(17) -0.0064(14) -0.0057(14) C15 0.0668(17) 0.0586(15) 0.0509(15) 0.0018(15) -0.0099(14) -0.0196(14) C16 0.0510(15) 0.0381(13) 0.0531(14) -0.0039(12) -0.0023(13) -0.0044(12) O21 0.0576(18) 0.108(2) 0.0550(17) 0.000 -0.0003(15) 0.000 N21 0.058(2) 0.105(3) 0.064(2) 0.000 0.0058(19) 0.000 N22 0.061(2) 0.076(2) 0.0540(19) 0.000 -0.0041(17) 0.000 C21 0.058(2) 0.047(2) 0.061(2) 0.000 0.000(2) 0.000 O31 0.0556(16) 0.0454(13) 0.0393(13) 0.000 0.0017(12) 0.000 N31 0.085(3) 0.122(4) 0.051(3) 0.038(3) 0.012(3) 0.010(3) N32 0.065(3) 0.087(3) 0.047(2) 0.013(3) 0.002(2) 0.017(2) C31 0.043(2) 0.083(3) 0.051(2) 0.000 -0.0008(19) 0.000 O1W 0.096(2) 0.0523(16) 0.0643(17) 0.000 0.0219(17) 0.000 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Ni1 O12 5_664 2.0349(15) No Ni1 O12 . 2.0349(15) Yes Ni1 N11 . 2.0531(18) Yes Ni1 N11 5_664 2.0531(18) No Ni1 O1 . 2.1255(15) Yes Ni1 O1 5_664 2.1255(15) No N2 C1 . 1.328(3) No N2 H2A . 0.8600 No N2 H2B . 0.8600 No O1 C1 . 1.255(3) No N1 C1 . 1.336(3) No N1 H1A . 0.8600 No N1 H1B . 0.8600 No O11 C11 . 1.237(3) No O12 C11 . 1.269(3) No N11 C16 . 1.344(3) No N11 C12 . 1.346(3) No C11 C12 . 1.504(3) No C12 C13 . 1.376(3) No C13 C14 . 1.380(4) No C13 H13A . 0.9300 No C14 C15 . 1.374(4) No C14 H14A . 0.9300 No C15 C16 . 1.382(4) No C15 H15A . 0.9300 No C16 H16A . 0.9300 No O21 C21 . 1.235(5) No N21 C21 . 1.357(5) No N21 H21A . 0.8600 No N21 H21B . 0.8600 No N22 C21 . 1.332(5) No N22 H22A . 0.8600 No N22 H22B . 0.8600 No O31 C31 . 1.238(5) No N31 C31 . 1.373(6) No N31 N32 7_575 1.886(7) No N31 H31A . 0.8600 No N31 H31B . 0.8600 No N32 C31 . 1.346(6) No N32 N31 7_575 1.886(7) No N32 H32A . 0.8600 No N32 H32B . 0.8600 No O1W H1C . 0.950(9) No loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O12 Ni1 O12 5_664 . 180 Yes O12 Ni1 N11 5_664 . 99.24(7) Yes O12 Ni1 N11 . . 80.76(7) Yes O12 Ni1 N11 5_664 5_664 80.76(7) No O12 Ni1 N11 . 5_664 99.24(7) No N11 Ni1 N11 . 5_664 180 Yes O12 Ni1 O1 5_664 . 92.88(6) Yes O12 Ni1 O1 . . 87.12(6) Yes N11 Ni1 O1 . . 90.22(7) Yes N11 Ni1 O1 5_664 . 89.78(7) Yes O12 Ni1 O1 5_664 5_664 87.12(6) No O12 Ni1 O1 . 5_664 92.88(6) No N11 Ni1 O1 . 5_664 89.78(7) No N11 Ni1 O1 5_664 5_664 90.22(7) NO O1 Ni1 O1 . 5_664 180 Yes C1 N2 H2A . . 120.0 NO C1 N2 H2B . . 120.0 NO H2A N2 H2B . . 120.0 NO C1 O1 Ni1 . . 131.75(14) NO C1 N1 H1A . . 120.0 NO C1 N1 H1B . . 120.0 NO H1A N1 H1B . . 120.0 NO O1 C1 N2 . . 120.3(2) NO O1 C1 N1 . . 122.5(2) NO N2 C1 N1 . . 117.1(2) NO C11 O12 Ni1 . . 114.95(14) NO C16 N11 C12 . . 118.6(2) NO C16 N11 Ni1 . . 129.06(16) NO C12 N11 Ni1 . . 112.30(15) NO O11 C11 O12 . . 124.6(2) NO O11 C11 C12 . . 118.8(2) NO O12 C11 C12 . . 116.7(2) NO N11 C12 C13 . . 122.0(2) NO N11 C12 C11 . . 115.14(19) NO C13 C12 C11 . . 122.9(2) NO C12 C13 C14 . . 119.1(2) NO C12 C13 H13A . . 120.5 NO C14 C13 H13A . . 120.5 NO C15 C14 C13 . . 119.4(2) NO C15 C14 H14A . . 120.3 NO C13 C14 H14A . . 120.3 NO C14 C15 C16 . . 118.9(3) NO C14 C15 H15A . . 120.6 NO C16 C15 H15A . . 120.6 NO N11 C16 C15 . . 122.1(2) NO N11 C16 H16A . . 119.0 NO C15 C16 H16A . . 119.0 NO C21 N21 H21A . . 120.0 NO C21 N21 H21B . . 120.0 NO H21A N21 H21B . . 120.0 NO C21 N22 H22A . . 120.0 NO C21 N22 H22B . . 120.0 NO H22A N22 H22B . . 120.0 NO O21 C21 N22 . . 122.0(4) NO O21 C21 N21 . . 121.2(4) NO N22 C21 N21 . . 116.8(4) NO C31 N31 N32 . 7_575 45.5(3) NO C31 N31 H31A . . 120.0 NO N32 N31 H31A 7_575 . 135.4 NO C31 N31 H31B . . 120.0 NO N32 N31 H31B 7_575 . 89.4 NO H31A N31 H31B . . 120.0 NO C31 N32 N31 . 7_575 46.7(3) NO C31 N32 H32A . . 120.0 NO N31 N32 H32A 7_575 . 134.3 NO C31 N32 H32B . . 120.0 NO N31 N32 H32B 7_575 . 89.3 NO H32A N32 H32B . . 120.0 NO O31 C31 N32 . . 121.7(4) NO O31 C31 N31 . . 119.9(4) NO N32 C31 N31 . . 118.3(4) NO loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N1 H1A O12 5_664 0.86 2.19 2.866(3) 135 N1 H1B O31 5_664 0.86 2.17 2.932(3) 147 N2 H2A O1 5_764 0.86 2.18 3.019(3) 166 N2 H2A O12 5_764 0.86 2.53 2.980(3) 114 N21 H21A O21 6_655 0.86 2.19 3.045(5) 175 N22 H22B O1W . 0.86 2.03 2.889(5) 176 N22 H22A O21 6 0.86 2.08 2.944(5) 179 N31 H31B N32 4_563 0.86 2.32 3.036(7) 141 N32 H32A O11 7_475 0.86 2.05 2.874(5) 161 O1W H1C O11 . 0.950(9) 1.909(12) 2.823(3) 161(2)