#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/36/2203693.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203693 loop_ _publ_author_name 'Blake, Alexander J.' 'Lippolis, Vito' 'Schr\"oder, Martin' _publ_section_title ; 10,13-Bis(p-tolylsulfonyl)-1,4,7-trithia-10,13-diazacyclopentadecane ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o901 _journal_page_last o903 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C24 H34 N2 O4 S5' _chemical_formula_moiety 'C24 H34 N2 O4 S5' _chemical_formula_sum 'C24 H34 N2 O4 S5' _chemical_formula_weight 574.83 _space_group_IT_number 92 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall 'P 4abw 2nw' _symmetry_space_group_name_H-M 'P 41 21 2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method 'enCIFer editing of SHELXL97 CIF output' _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.377(3) _cell_length_b 12.377(3) _cell_length_c 18.2960(10) _cell_measurement_reflns_used 35 _cell_measurement_temperature 220(2) _cell_measurement_theta_max 14.9 _cell_measurement_theta_min 10.1 _cell_volume 2802.8(10) _computing_cell_refinement STADI4 _computing_data_collection 'STADI4 (Stoe & Cie, 1997)' _computing_data_reduction 'X-RED (Stoe, 1997)' _computing_molecular_graphics 'SHELXTL (Bruker, 2001)' _computing_publication_material 'enCIFer (Allen et al., 2004) and PLATON (Spek, 2003)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 220(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Stoe Stadi-4 four-circle' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.115 _diffrn_reflns_av_sigmaI/netI 0.068 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3449 _diffrn_reflns_theta_full 25.09 _diffrn_reflns_theta_max 25.1 _diffrn_reflns_theta_min 2.6 _diffrn_standards_decay_% 7.4 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.45 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.362 _exptl_crystal_density_method 'not measured' _exptl_crystal_description column _exptl_crystal_F_000 1216 _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.39 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.26 _refine_diff_density_min -0.20 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack 0.0(3) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.11 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 178 _refine_ls_number_reflns 1491 _refine_ls_number_restraints 55 _refine_ls_restrained_S_all 1.09 _refine_ls_R_factor_all 0.129 _refine_ls_R_factor_gt 0.070 _refine_ls_shift/su_max 0.018 _refine_ls_shift/su_mean 0.003 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.017P)^2^+7.15P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.117 _refine_ls_wR_factor_ref 0.149 _reflns_number_gt 911 _reflns_number_total 1491 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ya6205.cif _[local]_cod_data_source_block I _cod_database_code 2203693 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' '-y+1/2, x+1/2, z+1/4' 'y+1/2, -x+1/2, z+3/4' '-x+1/2, y+1/2, -z+1/4' 'x+1/2, -y+1/2, -z+3/4' 'y, x, -z' '-y, -x, -z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 0.7351(6) 0.9277(6) 0.0432(4) 0.0592(19) Uani d DU 1 . . N C2 0.6407(7) 0.8796(11) 0.0804(6) 0.062(4) Uani d PDU 0.705(12) A 1 C H2A 0.6179 0.9266 0.1206 0.075 Uiso calc PR 0.705(12) A 1 H H2B 0.6607 0.8093 0.1010 0.075 Uiso calc PR 0.705(12) A 1 H C3 0.5483(7) 0.8654(11) 0.0270(6) 0.074(4) Uani d PDU 0.705(12) A 1 C H3A 0.5723 0.8211 -0.0144 0.089 Uiso calc PR 0.705(12) A 1 H H3B 0.5263 0.9361 0.0081 0.089 Uiso calc PR 0.705(12) A 1 H C2' 0.6199(11) 0.901(3) 0.0342(16) 0.057(10) Uiso d PDU 0.295(12) A 2 C H2C 0.6096 0.8677 -0.0140 0.068 Uiso calc PR 0.295(12) A 2 H H2D 0.5779 0.9679 0.0352 0.068 Uiso calc PR 0.295(12) A 2 H C3' 0.5756(9) 0.825(3) 0.0920(16) 0.079(12) Uiso d PDU 0.295(12) A 2 C H3C 0.5828 0.8572 0.1406 0.095 Uiso calc PR 0.295(12) A 2 H H3D 0.6157 0.7565 0.0915 0.095 Uiso calc PR 0.295(12) A 2 H S4 0.4336(3) 0.8004(3) 0.07142(19) 0.0888(11) Uani d DU 1 . . S C5 0.4649(11) 0.6577(5) 0.0694(5) 0.058(4) Uani d PDU 0.705(12) A 1 C H5A 0.5404 0.6475 0.0838 0.070 Uiso calc PR 0.705(12) A 1 H H5B 0.4195 0.6203 0.1053 0.070 Uiso calc PR 0.705(12) A 1 H C6 0.4473(9) 0.6071(4) -0.0050(5) 0.057(3) Uani d PDU 0.705(12) A 1 C H6A 0.5003 0.6361 -0.0396 0.068 Uiso calc PR 0.705(12) A 1 H H6B 0.3750 0.6255 -0.0228 0.068 Uiso calc PR 0.705(12) A 1 H C5' 0.434(3) 0.6730(13) 0.0219(15) 0.067(11) Uiso d PDU 0.295(12) A 2 C H5C 0.3609 0.6591 0.0044 0.081 Uiso calc PR 0.295(12) A 2 H H5D 0.4805 0.6817 -0.0213 0.081 Uiso calc PR 0.295(12) A 2 H C6' 0.472(4) 0.5738(15) 0.0633(13) 0.101(15) Uiso d PDU 0.295(12) A 2 C H6C 0.4272 0.5615 0.1064 0.121 Uiso calc PR 0.295(12) A 2 H H6D 0.5475 0.5828 0.0792 0.121 Uiso calc PR 0.295(12) A 2 H S7 0.4611(2) 0.4611(2) 0.0000 0.0771(12) Uani d SDU 1 . . S C15 0.7930(7) 0.8722(7) -0.0165(5) 0.078(3) Uani d DU 1 A . C H15A 0.8316 0.9252 -0.0465 0.093 Uiso calc R 1 . . H H15B 0.7414 0.8339 -0.0478 0.093 Uiso calc R 1 . . H S1T 0.7544(3) 1.0577(2) 0.04642(13) 0.0657(8) Uani d U 1 A . S O1T 0.6996(8) 1.0973(6) 0.1091(3) 0.098(3) Uani d U 1 . . O O2T 0.8685(6) 1.0734(6) 0.0405(4) 0.093(2) Uani d U 1 . . O C1T 0.6935(8) 1.1146(7) -0.0319(4) 0.051(2) Uani d U 1 . . C C2T 0.5864(8) 1.1476(7) -0.0273(5) 0.062(3) Uani d U 1 A . C H2TA 0.5482 1.1421 0.0169 0.074 Uiso calc R 1 . . H C3T 0.5369(8) 1.1889(8) -0.0894(5) 0.066(3) Uani d U 1 . . C H3TA 0.4646 1.2119 -0.0869 0.079 Uiso calc R 1 A . H C4T 0.5921(9) 1.1968(8) -0.1553(6) 0.065(3) Uani d U 1 A . C C5T 0.6984(9) 1.1607(7) -0.1571(5) 0.060(2) Uani d U 1 . . C H5T 0.7367 1.1631 -0.2015 0.072 Uiso calc R 1 A . H C6T 0.7483(8) 1.1219(7) -0.0961(4) 0.054(2) Uani d U 1 A . C H6T 0.8210 1.1001 -0.0984 0.064 Uiso calc R 1 . . H C7T 0.5386(9) 1.2418(9) -0.2232(5) 0.097(4) Uani d U 1 . . C H7T1 0.5635 1.3151 -0.2314 0.146 Uiso calc R 1 A . H H7T2 0.4608 1.2420 -0.2166 0.146 Uiso calc R 1 . . H H7T3 0.5571 1.1973 -0.2649 0.146 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.060(5) 0.047(4) 0.071(5) 0.005(4) 0.010(4) -0.010(4) C2 0.066(7) 0.058(8) 0.063(9) 0.012(6) 0.003(6) 0.004(8) C3 0.095(9) 0.068(9) 0.059(8) -0.017(8) -0.006(7) 0.010(8) S4 0.068(2) 0.074(2) 0.125(3) -0.0033(17) 0.0213(19) -0.0209(19) C5 0.051(9) 0.063(6) 0.062(8) -0.010(6) -0.008(8) 0.009(6) C6 0.032(7) 0.066(6) 0.071(8) -0.008(6) 0.022(7) -0.004(6) S7 0.0635(15) 0.0635(15) 0.104(3) -0.015(2) 0.0045(18) -0.0045(18) C15 0.082(7) 0.079(7) 0.072(7) 0.016(6) -0.003(6) -0.011(6) S1T 0.093(2) 0.0538(15) 0.0504(13) -0.0074(15) -0.0074(15) -0.0076(13) O1T 0.187(9) 0.062(5) 0.045(4) 0.017(5) 0.008(5) -0.012(3) O2T 0.084(5) 0.094(6) 0.101(5) -0.035(4) -0.040(4) 0.026(5) C1T 0.062(5) 0.042(5) 0.048(4) 0.000(4) 0.004(4) -0.014(4) C2T 0.065(6) 0.059(6) 0.063(5) -0.005(5) 0.015(5) -0.004(5) C3T 0.054(6) 0.052(6) 0.091(6) 0.007(5) 0.003(5) 0.007(6) C4T 0.077(6) 0.045(6) 0.073(5) -0.008(5) -0.005(5) 0.004(5) C5T 0.077(6) 0.058(6) 0.044(4) -0.002(5) 0.009(5) -0.008(5) C6T 0.056(5) 0.047(5) 0.057(5) -0.007(5) 0.010(4) -0.006(4) C7T 0.097(9) 0.100(9) 0.095(7) -0.014(7) -0.026(7) 0.026(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance N1 C2 . 1.477(5) N1 C2' . 1.473(5) N1 C15 . 1.475(11) N1 S1T . 1.629(7) C2 C3 . 1.514(5) C2 H2A . 0.9800 C2 H2B . 0.9800 C3 S4 . 1.823(5) C3 H3A . 0.9800 C3 H3B . 0.9800 C2' C3' . 1.519(5) C2' H2C . 0.9800 C2' H2D . 0.9800 C3' S4 . 1.822(5) C3' H3C . 0.9800 C3' H3D . 0.9800 S4 C5 . 1.809(5) S4 C5' . 1.819(5) C5 C6 . 1.515(5) C5 H5A . 0.9800 C5 H5B . 0.9800 C6 S7 . 1.817(5) C6 H6A . 0.9800 C6 H6B . 0.9800 C5' C6' . 1.518(5) C5' H5C . 0.9800 C5' H5D . 0.9800 C6' S7 . 1.818(5) C6' H6C . 0.9800 C6' H6D . 0.9800 S7 C6 7 1.817(5) S7 C6' 7 1.818(5) C15 C15 7 1.513(12) C15 H15A . 0.9800 C15 H15B . 0.9800 S1T O1T . 1.420(7) S1T O2T . 1.429(7) S1T C1T . 1.766(9) C1T C6T . 1.359(11) C1T C2T . 1.390(12) C2T C3T . 1.388(12) C2T H2TA . 0.9400 C3T C4T . 1.389(12) C3T H3TA . 0.9400 C4T C5T . 1.389(14) C4T C7T . 1.513(12) C5T C6T . 1.364(12) C5T H5T . 0.9400 C6T H6T . 0.9400 C7T H7T1 . 0.9700 C7T H7T2 . 0.9700 C7T H7T3 . 0.9700 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle C15 N1 C2' . . 106.4(16) C15 N1 C2 . . 122.6(9) C15 N1 S1T . . 114.5(6) C2 N1 S1T . . 119.8(7) C2' N1 S1T . . 111.7(14) N1 C2 C3 . . 110.3(7) N1 C2 H2A . . 109.6 C3 C2 H2A . . 109.6 N1 C2 H2B . . 109.6 C3 C2 H2B . . 109.6 H2A C2 H2B . . 108.1 C2 C3 S4 . . 110.6(6) C2 C3 H3A . . 109.5 S4 C3 H3A . . 109.5 C2 C3 H3B . . 109.5 S4 C3 H3B . . 109.5 H3A C3 H3B . . 108.1 N1 C2' C3' . . 114.3(13) N1 C2' H2C . . 108.7 C3' C2' H2C . . 108.7 N1 C2' H2D . . 108.7 C3' C2' H2D . . 108.7 H2C C2' H2D . . 107.6 C2' C3' S4 . . 107.9(9) C2' C3' H3C . . 110.1 S4 C3' H3C . . 110.1 C2' C3' H3D . . 110.1 S4 C3' H3D . . 110.1 H3C C3' H3D . . 108.4 C5' S4 C3' . . 103.9(18) C5 S4 C3 . . 104.8(7) C6 C5 S4 . . 113.0(5) C6 C5 H5A . . 109.0 S4 C5 H5A . . 109.0 C6 C5 H5B . . 109.0 S4 C5 H5B . . 109.0 H5A C5 H5B . . 107.8 C5 C6 S7 . . 110.6(5) C5 C6 H6A . . 109.5 S7 C6 H6A . . 109.5 C5 C6 H6B . . 109.5 S7 C6 H6B . . 109.5 H6A C6 H6B . . 108.1 C6' C5' S4 . . 117.0(12) C6' C5' H5C . . 108.0 S4 C5' H5C . . 108.0 C6' C5' H5D . . 108.0 S4 C5' H5D . . 108.0 H5C C5' H5D . . 107.3 C5' C6' S7 . . 106.2(8) C5' C6' H6C . . 110.5 S7 C6' H6C . . 110.5 C5' C6' H6D . . 110.5 S7 C6' H6D . . 110.5 H6C C6' H6D . . 108.7 C6 S7 C6 . 7 100.9(8) C6' S7 C6' . 7 107(3) N1 C15 C15 . 7 108.8(9) N1 C15 H15A . . 109.9 C15 C15 H15A 7 . 109.9 N1 C15 H15B . . 109.9 C15 C15 H15B 7 . 109.9 H15A C15 H15B . . 108.3 O1T S1T O2T . . 119.1(5) O1T S1T N1 . . 107.5(5) O2T S1T N1 . . 106.1(4) O1T S1T C1T . . 108.3(5) O2T S1T C1T . . 107.8(5) N1 S1T C1T . . 107.6(4) C6T C1T C2T . . 120.5(9) C6T C1T S1T . . 121.0(8) C2T C1T S1T . . 118.4(7) C3T C2T C1T . . 118.7(9) C3T C2T H2TA . . 120.7 C1T C2T H2TA . . 120.7 C2T C3T C4T . . 121.3(9) C2T C3T H3TA . . 119.4 C4T C3T H3TA . . 119.4 C3T C4T C5T . . 117.6(9) C3T C4T C7T . . 121.5(10) C5T C4T C7T . . 120.9(10) C6T C5T C4T . . 121.5(9) C6T C5T H5T . . 119.3 C4T C5T H5T . . 119.3 C1T C6T C5T . . 120.3(9) C1T C6T H6T . . 119.8 C5T C6T H6T . . 119.8 C4T C7T H7T1 . . 109.5 C4T C7T H7T2 . . 109.5 H7T1 C7T H7T2 . . 109.5 C4T C7T H7T3 . . 109.5 H7T1 C7T H7T3 . . 109.5 H7T2 C7T H7T3 . . 109.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion C15 N1 C2 C3 . -63.6(13) S1T N1 C2 C3 . 95.5(11) N1 C2 C3 S4 . 177.4(8) C15 N1 C2' C3' . 109(3) C2 N1 C2' C3' . -14(2) S1T N1 C2' C3' . -125(3) N1 C2' C3' S4 . -180(2) C2' C3' S4 C5' . 97(3) C2 C3 S4 C5 . -82.1(11) C3 S4 C5 C6 . -76.6(10) S4 C5 C6 S7 . -171.7(7) C3' S4 C5' C6' . 64(3) S4 C5' C6' S7 . 179(2) C5 C6 S7 C6 7 -76.4(8) C5' C6' S7 C6' 7 76(3) C2' N1 C15 C15 7 -118.6(12) C2 N1 C15 C15 7 -82.4(8) S1T N1 C15 C15 7 117.5(4) C15 N1 S1T O1T . -176.2(6) C2' N1 S1T O1T . 62.7(14) C2 N1 S1T O1T . 23.1(8) C15 N1 S1T O2T . -47.8(7) C2' N1 S1T O2T . -168.8(13) C2 N1 S1T O2T . 151.6(7) C15 N1 S1T C1T . 67.4(7) C2' N1 S1T C1T . -53.7(14) C2 N1 S1T C1T . -93.3(8) O1T S1T C1T C6T . 157.5(8) O2T S1T C1T C6T . 27.4(9) N1 S1T C1T C6T . -86.6(8) O1T S1T C1T C2T . -25.3(9) O2T S1T C1T C2T . -155.4(8) N1 S1T C1T C2T . 90.6(8) C6T C1T C2T C3T . -0.5(14) S1T C1T C2T C3T . -177.7(7) C1T C2T C3T C4T . 0.4(15) C2T C3T C4T C5T . 0.8(15) C2T C3T C4T C7T . -179.9(9) C3T C4T C5T C6T . -2.0(14) C7T C4T C5T C6T . 178.7(9) C2T C1T C6T C5T . -0.7(14) S1T C1T C6T C5T . 176.5(7) C4T C5T C6T C1T . 2.0(14) _cod_database_fobs_code 2203693 _journal_paper_doi 10.1107/S1600536804009201