#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/42/2204224.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204224 loop_ _publ_author_name 'Meng-Xin Ding' 'Bing Ma' 'Ran Zhu' 'Hai-Tao Sha' 'Ji Shao' 'Xin Sheng' _publ_section_title ; 2,2,5,5-Tetramethyl-1,6-diphenyl-7,8-diselenabicyclo[4.1.1]octane 7,8-dioxide ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1458 _journal_page_last o1459 _journal_paper_doi 10.1107/S1600536804018392 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C22 H26 O2 Se2' _chemical_formula_moiety 'C22 H26 O2 Se2' _chemical_formula_sum 'C22 H26 O2 Se2' _chemical_formula_weight 480.35 _chemical_melting_point 170 _chemical_name_systematic ; 2,2,5,5-Tetramethyl-1,6-diphenyl-7,8-diselenabicyclo[4.1.1]octane 7,8-dioxide ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 103.43(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.1930(18) _cell_length_b 17.752(4) _cell_length_c 12.779(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13 _cell_measurement_theta_min 10 _cell_volume 2028.4(8) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf--Nonius, 1989)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.991 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Enraf--Nonius CAD-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0651 _diffrn_reflns_av_sigmaI/netI 0.0568 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 21 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 4203 _diffrn_reflns_theta_full 25.97 _diffrn_reflns_theta_max 25.97 _diffrn_reflns_theta_min 2.00 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 200 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 3.659 _exptl_absorpt_correction_T_max 0.334 _exptl_absorpt_correction_T_min 0.279 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.573 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 968 _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.3 _refine_diff_density_max 1.047 _refine_diff_density_min -1.066 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.144 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 235 _refine_ls_number_reflns 3951 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.144 _refine_ls_R_factor_all 0.0979 _refine_ls_R_factor_gt 0.0578 _refine_ls_shift/su_max 0.007 _refine_ls_shift/su_mean 0.002 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.14P)^2^+4P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1941 _refine_ls_wR_factor_ref 0.2348 _reflns_number_gt 2764 _reflns_number_total 3951 _reflns_threshold_expression I>2\s(I) _cod_data_source_file su6120.cif _cod_data_source_block I _cod_original_cell_volume 2028.4(7) _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2204224 _cod_database_fobs_code 2204224 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Se1 0.41943(10) 0.16128(5) 0.47740(7) 0.0359(3) Uani d . 1 Se Se2 0.28231(8) 0.25444(5) 0.61144(6) 0.0301(3) Uani d . 1 Se O1 0.5646(7) 0.1448(4) 0.5782(6) 0.0551(19) Uani d . 1 O O2 0.1275(7) 0.3028(4) 0.6068(6) 0.0459(16) Uani d . 1 O C1 0.3735(9) 0.2730(5) 0.4841(7) 0.0302(18) Uani d . 1 C C2 0.2740(9) 0.2968(5) 0.3721(7) 0.036(2) Uani d . 1 C C3 0.1580(10) 0.2362(6) 0.3223(8) 0.045(2) Uani d . 1 C H3A 0.1015 0.2551 0.2536 0.055 Uiso calc R 1 H H3B 0.2122 0.1921 0.3077 0.055 Uiso calc R 1 H C4 0.0459(9) 0.2109(6) 0.3878(7) 0.040(2) Uani d . 1 C H4A -0.0481 0.1999 0.3375 0.048 Uiso calc R 1 H H4B 0.0283 0.2533 0.4311 0.048 Uiso calc R 1 H C5 0.0864(9) 0.1421(5) 0.4635(7) 0.036(2) Uani d . 1 C C6 0.2408(9) 0.1512(5) 0.5473(6) 0.0299(17) Uani d . 1 C C7 0.0850(12) 0.0710(7) 0.4000(8) 0.055(3) Uani d . 1 C H7A 0.1617 0.0734 0.3603 0.083 Uiso calc R 1 H H7B -0.0107 0.0654 0.3508 0.083 Uiso calc R 1 H H7C 0.1030 0.0287 0.4481 0.083 Uiso calc R 1 H C8 -0.0378(10) 0.1376(6) 0.5270(9) 0.048(2) Uani d . 1 C H8A -0.1333 0.1321 0.4776 0.072 Uiso calc R 1 H H8B -0.0373 0.1829 0.5682 0.072 Uiso calc R 1 H H8C -0.0198 0.0950 0.5746 0.072 Uiso calc R 1 H C9 0.1930(11) 0.3718(6) 0.3813(8) 0.049(3) Uani d . 1 C H9A 0.2651 0.4093 0.4129 0.073 Uiso calc R 1 H H9B 0.1232 0.3647 0.4258 0.073 Uiso calc R 1 H H9C 0.1405 0.3880 0.3110 0.073 Uiso calc R 1 H C10 0.3751(11) 0.3076(7) 0.2935(8) 0.052(3) Uani d . 1 C H10A 0.4493 0.3451 0.3211 0.078 Uiso calc R 1 H H10B 0.3159 0.3236 0.2250 0.078 Uiso calc R 1 H H10C 0.4235 0.2608 0.2850 0.078 Uiso calc R 1 H C11 0.5075(9) 0.3226(5) 0.5256(7) 0.0325(19) Uani d . 1 C C12 0.6514(10) 0.3024(6) 0.5156(8) 0.043(2) Uani d . 1 C H12A 0.6662 0.2582 0.4803 0.052 Uiso calc R 1 H C13 0.7717(10) 0.3492(7) 0.5590(9) 0.052(3) Uani d . 1 C H13A 0.8673 0.3352 0.5540 0.063 Uiso calc R 1 H C14 0.7526(10) 0.4149(7) 0.6085(9) 0.057(3) Uani d . 1 C H14A 0.8342 0.4461 0.6345 0.069 Uiso calc R 1 H C15 0.6136(11) 0.4354(6) 0.6204(8) 0.047(2) Uani d . 1 C H15A 0.6002 0.4806 0.6539 0.057 Uiso calc R 1 H C16 0.4904(10) 0.3868(6) 0.5809(7) 0.042(2) Uani d . 1 C H16A 0.3970 0.3988 0.5927 0.051 Uiso calc R 1 H C17 0.2762(9) 0.0923(5) 0.6351(7) 0.0349(19) Uani d . 1 C C18 0.3372(11) 0.0227(6) 0.6151(8) 0.045(2) Uani d . 1 C H18A 0.3599 0.0132 0.5491 0.054 Uiso calc R 1 H C19 0.3632(11) -0.0318(6) 0.6955(9) 0.050(3) Uani d . 1 C H19A 0.4052 -0.0776 0.6831 0.060 Uiso calc R 1 H C20 0.3285(11) -0.0194(6) 0.7921(8) 0.048(2) Uani d . 1 C H20A 0.3468 -0.0564 0.8451 0.058 Uiso calc R 1 H C21 0.2667(11) 0.0477(6) 0.8105(8) 0.051(3) Uani d . 1 C H21A 0.2412 0.0562 0.8757 0.061 Uiso calc R 1 H C22 0.2420(11) 0.1026(6) 0.7327(8) 0.043(2) Uani d . 1 C H22A 0.2008 0.1482 0.7469 0.052 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Se1 0.0350(5) 0.0365(5) 0.0373(5) 0.0017(4) 0.0104(4) -0.0032(4) Se2 0.0267(5) 0.0325(5) 0.0294(5) -0.0025(3) 0.0032(3) -0.0038(3) O1 0.030(3) 0.063(5) 0.065(5) 0.003(3) -0.004(3) 0.014(4) O2 0.036(3) 0.048(4) 0.057(4) 0.006(3) 0.019(3) 0.001(3) C1 0.027(4) 0.028(4) 0.033(4) -0.007(3) 0.001(3) -0.001(4) C2 0.023(4) 0.048(6) 0.032(4) -0.012(4) -0.004(3) 0.000(4) C3 0.034(5) 0.059(7) 0.036(5) -0.011(4) -0.006(4) 0.010(5) C4 0.033(5) 0.041(5) 0.036(5) -0.013(4) -0.013(4) 0.001(4) C5 0.032(4) 0.041(5) 0.032(4) -0.009(4) -0.001(4) 0.002(4) C6 0.038(4) 0.026(4) 0.027(4) -0.001(3) 0.009(3) -0.009(3) C7 0.050(6) 0.070(8) 0.043(6) -0.021(5) 0.004(5) -0.015(5) C8 0.035(5) 0.046(6) 0.061(6) -0.009(4) 0.006(4) 0.006(5) C9 0.046(5) 0.042(6) 0.047(6) -0.001(4) -0.011(4) 0.016(5) C10 0.047(6) 0.070(8) 0.037(5) -0.010(5) 0.007(4) 0.007(5) C11 0.023(4) 0.036(5) 0.036(5) -0.003(3) 0.001(3) 0.009(4) C12 0.032(5) 0.043(6) 0.053(6) -0.003(4) 0.006(4) 0.002(5) C13 0.020(4) 0.068(8) 0.066(7) -0.009(4) 0.002(4) 0.009(6) C14 0.030(5) 0.063(8) 0.067(7) -0.017(5) -0.015(5) 0.015(6) C15 0.056(6) 0.040(6) 0.043(5) -0.018(5) 0.006(5) -0.001(4) C16 0.033(5) 0.058(6) 0.032(5) -0.013(4) -0.002(4) 0.003(4) C17 0.025(4) 0.034(5) 0.045(5) -0.003(3) 0.005(4) -0.003(4) C18 0.049(5) 0.038(6) 0.048(5) 0.000(4) 0.012(4) -0.001(5) C19 0.043(5) 0.035(6) 0.069(7) 0.004(4) 0.006(5) 0.013(5) C20 0.045(6) 0.053(7) 0.042(5) -0.003(5) 0.003(4) 0.018(5) C21 0.052(6) 0.059(7) 0.041(5) 0.004(5) 0.013(5) 0.007(5) C22 0.049(5) 0.034(5) 0.048(6) 0.000(4) 0.012(5) 0.001(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Se Se -0.0929 2.2259 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 Se1 C1 106.1(4) y O1 Se1 C6 103.2(4) y C1 Se1 C6 82.6(3) ? O2 Se2 C6 112.3(3) y O2 Se2 C1 113.7(3) y C6 Se2 C1 84.0(3) ? C11 C1 C2 114.8(7) ? C11 C1 Se2 105.6(5) ? C2 C1 Se2 121.0(5) ? C11 C1 Se1 115.1(6) ? C2 C1 Se1 107.9(6) ? Se2 C1 Se1 90.2(3) ? C10 C2 C3 106.5(8) ? C10 C2 C9 108.7(8) ? C3 C2 C9 109.5(7) ? C10 C2 C1 108.6(7) ? C3 C2 C1 112.9(7) ? C9 C2 C1 110.7(7) ? C4 C3 C2 117.8(8) ? C4 C3 H3A 107.9 ? C2 C3 H3A 107.9 ? C4 C3 H3B 107.9 ? C2 C3 H3B 107.9 ? H3A C3 H3B 107.2 ? C3 C4 C5 118.4(8) ? C3 C4 H4A 107.7 ? C5 C4 H4A 107.7 ? C3 C4 H4B 107.7 ? C5 C4 H4B 107.7 ? H4A C4 H4B 107.1 ? C7 C5 C4 110.8(8) ? C7 C5 C8 109.0(8) ? C4 C5 C8 105.6(8) ? C7 C5 C6 110.3(8) ? C4 C5 C6 113.1(7) ? C8 C5 C6 107.9(7) ? C17 C6 C5 116.0(7) ? C17 C6 Se2 109.9(5) ? C5 C6 Se2 115.3(6) ? C17 C6 Se1 109.1(5) ? C5 C6 Se1 113.5(5) ? Se2 C6 Se1 90.2(3) ? C5 C7 H7A 109.5 ? C5 C7 H7B 109.5 ? H7A C7 H7B 109.5 ? C5 C7 H7C 109.5 ? H7A C7 H7C 109.5 ? H7B C7 H7C 109.5 ? C5 C8 H8A 109.5 ? C5 C8 H8B 109.5 ? H8A C8 H8B 109.5 ? C5 C8 H8C 109.5 ? H8A C8 H8C 109.5 ? H8B C8 H8C 109.5 ? C2 C9 H9A 109.5 ? C2 C9 H9B 109.5 ? H9A C9 H9B 109.5 ? C2 C9 H9C 109.5 ? H9A C9 H9C 109.5 ? H9B C9 H9C 109.5 ? C2 C10 H10A 109.5 ? C2 C10 H10B 109.5 ? H10A C10 H10B 109.5 ? C2 C10 H10C 109.5 ? H10A C10 H10C 109.5 ? H10B C10 H10C 109.5 ? C16 C11 C12 118.8(8) ? C16 C11 C1 119.1(7) ? C12 C11 C1 121.9(8) ? C13 C12 C11 119.3(10) ? C13 C12 H12A 120.4 ? C11 C12 H12A 120.4 ? C14 C13 C12 121.5(9) ? C14 C13 H13A 119.3 ? C12 C13 H13A 119.3 ? C13 C14 C15 120.4(9) ? C13 C14 H14A 119.8 ? C15 C14 H14A 119.8 ? C14 C15 C16 119.1(10) ? C14 C15 H15A 120.5 ? C16 C15 H15A 120.5 ? C11 C16 C15 120.8(9) ? C11 C16 H16A 119.6 ? C15 C16 H16A 119.6 ? C22 C17 C18 118.0(9) ? C22 C17 C6 121.9(8) ? C18 C17 C6 119.9(8) ? C19 C18 C17 118.9(9) ? C19 C18 H18A 120.5 ? C17 C18 H18A 120.5 ? C20 C19 C18 121.4(10) ? C20 C19 H19A 119.3 ? C18 C19 H19A 119.3 ? C21 C20 C19 119.4(10) ? C21 C20 H20A 120.3 ? C19 C20 H20A 120.3 ? C20 C21 C22 120.1(10) ? C20 C21 H21A 120.0 ? C22 C21 H21A 120.0 ? C17 C22 C21 122.1(10) ? C17 C22 H22A 119.0 ? C21 C22 H22A 119.0 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Se1 C6 2.051(8) y Se2 O2 1.651(6) y Se2 C6 2.007(8) y Se2 C1 2.023(8) y C1 C11 1.507(11) ? C1 C2 1.567(11) ? C2 C10 1.531(12) ? C2 C3 1.543(12) ? C2 C9 1.543(14) ? C3 C4 1.539(13) ? C3 H3A 0.9700 ? C3 H3B 0.9700 ? C4 C5 1.548(13) ? C4 H4A 0.9700 ? C4 H4B 0.9700 ? C5 C7 1.500(14) ? C5 C8 1.549(13) ? C5 C6 1.575(11) ? C6 C17 1.514(12) ? C7 H7A 0.9600 ? C7 H7B 0.9600 ? C7 H7C 0.9600 ? C8 H8A 0.9600 ? C8 H8B 0.9600 ? C8 H8C 0.9600 ? C9 H9A 0.9600 ? C9 H9B 0.9600 ? C9 H9C 0.9600 ? C10 H10A 0.9600 ? C10 H10B 0.9600 ? C10 H10C 0.9600 ? C11 C16 1.371(13) ? C11 C12 1.405(12) ? C12 C13 1.391(13) ? C12 H12A 0.9300 ? C13 C14 1.357(16) ? C13 H13A 0.9300 ? C14 C15 1.371(15) ? C14 H14A 0.9300 ? C15 C16 1.420(13) ? C15 H15A 0.9300 ? C16 H16A 0.9300 ? C17 C22 1.367(13) ? C17 C18 1.405(13) ? C18 C19 1.391(13) ? C18 H18A 0.9300 ? C19 C20 1.363(15) ? C19 H19A 0.9300 ? C20 C21 1.362(15) ? C20 H20A 0.9300 ? C21 C22 1.373(14) ? C21 H21A 0.9300 ? C22 H22A 0.9300 ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O2 Se2 C1 C11 105.0(6) C6 Se2 C1 C11 -143.3(6) O2 Se2 C1 C2 -27.6(8) C6 Se2 C1 C2 84.1(7) O2 Se2 C1 Se1 -138.8(3) C6 Se2 C1 Se1 -27.1(3) O1 Se1 C1 C11 32.3(7) C6 Se1 C1 C11 134.0(6) O1 Se1 C1 C2 162.0(5) C6 Se1 C1 C2 -96.3(5) O1 Se1 C1 Se2 -75.1(4) C6 Se1 C1 Se2 26.6(3) C11 C1 C2 C10 50.6(10) Se2 C1 C2 C10 179.2(7) Se1 C1 C2 C10 -79.3(8) C11 C1 C2 C3 168.3(8) Se2 C1 C2 C3 -63.1(10) Se1 C1 C2 C3 38.5(9) C11 C1 C2 C9 -68.6(9) Se2 C1 C2 C9 60.0(9) Se1 C1 C2 C9 161.5(6) C10 C2 C3 C4 176.8(8) C9 C2 C3 C4 -65.9(11) C1 C2 C3 C4 57.8(11) C2 C3 C4 C5 -92.0(11) C3 C4 C5 C7 -69.0(10) C3 C4 C5 C8 173.1(8) C3 C4 C5 C6 55.4(11) C7 C5 C6 C17 -64.8(9) C4 C5 C6 C17 170.5(7) C8 C5 C6 C17 54.2(10) C7 C5 C6 Se2 164.8(6) C4 C5 C6 Se2 40.1(9) C8 C5 C6 Se2 -76.3(8) C7 C5 C6 Se1 62.7(8) C4 C5 C6 Se1 -62.0(9) C8 C5 C6 Se1 -178.3(6) O2 Se2 C6 C17 -109.6(6) C1 Se2 C6 C17 137.3(6) O2 Se2 C6 C5 23.7(7) C1 Se2 C6 C5 -89.4(6) O2 Se2 C6 Se1 140.0(3) C1 Se2 C6 Se1 26.8(3) O1 Se1 C6 C17 -33.0(6) C1 Se1 C6 C17 -138.0(6) O1 Se1 C6 C5 -164.0(6) C1 Se1 C6 C5 91.0(6) O1 Se1 C6 Se2 78.1(4) C1 Se1 C6 Se2 -26.8(3) C2 C1 C11 C16 84.9(10) Se2 C1 C11 C16 -51.0(9) Se1 C1 C11 C16 -148.8(7) C2 C1 C11 C12 -99.4(10) Se2 C1 C11 C12 124.6(8) Se1 C1 C11 C12 26.8(11) C16 C11 C12 C13 -2.0(14) C1 C11 C12 C13 -177.7(9) C11 C12 C13 C14 -1.6(16) C12 C13 C14 C15 2.4(17) C13 C14 C15 C16 0.4(16) C12 C11 C16 C15 4.8(13) C1 C11 C16 C15 -179.4(8) C14 C15 C16 C11 -4.1(14) C5 C6 C17 C22 -93.1(10) Se2 C6 C17 C22 39.9(10) Se1 C6 C17 C22 137.3(7) C5 C6 C17 C18 82.8(10) Se2 C6 C17 C18 -144.2(7) Se1 C6 C17 C18 -46.8(9) C22 C17 C18 C19 -1.4(13) C6 C17 C18 C19 -177.4(8) C17 C18 C19 C20 1.1(15) C18 C19 C20 C21 0.1(16) C19 C20 C21 C22 -1.0(16) C18 C17 C22 C21 0.5(14) C6 C17 C22 C21 176.5(9) C20 C21 C22 C17 0.7(16) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139066975