#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/42/2204263.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204263 loop_ _publ_author_name 'Vencato, Ivo' 'Lariucci, Carlito' 'Ferreira, Katiuscia D.' 'Santana, Ricardo C.' 'Carvalho, Jesiel F.' _publ_section_title ; Redetermination of bis(L-asparaginato)copper(II) ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m1428 _journal_page_last m1430 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Cu (C4 H7 N2 O3 )2]' _chemical_formula_moiety 'C8 H14 Cu N4 O6' _chemical_formula_structural ; [Cu(OOC.CHNH~2~.CH~2~.CONH~2~)~2~]~n~ ; _chemical_formula_sum 'C8 H14 Cu N4 O6' _chemical_formula_weight 325.77 _chemical_name_common ; catena-(bis(\u~2~-L-asparaginato-N,O,O')copper(II) ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 96.21(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 5.036(2) _cell_length_b 18.915(2) _cell_length_c 6.1520(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 58.3 _cell_measurement_theta_min 14.4 _cell_volume 582.6(3) _computing_cell_refinement CAD-4/PC _computing_data_collection 'CAD-4/PC (Enraf-Nonius, 1993)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics ; Ortep-3 for Windows (Farrugia, 1997) ; _computing_publication_material ; WinGX publication routines (Farrugia, 1999) ; _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.001 _diffrn_measurement_device_type 'Nonius CAD-4 diffractometer' _diffrn_measurement_method \w--2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54180 _diffrn_reflns_av_R_equivalents 0.020 _diffrn_reflns_av_sigmaI/netI 0.018 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 23 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min -4 _diffrn_reflns_number 2230 _diffrn_reflns_theta_full 73.9 _diffrn_reflns_theta_max 73.9 _diffrn_reflns_theta_min 4.68 _diffrn_standards_decay_% <1.0 _diffrn_standards_interval_time 120 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 2.99 _exptl_absorpt_correction_T_max 0.796 _exptl_absorpt_correction_T_min 0.572 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details 'North, Phillips & Mathews (1968)' _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.857 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 334 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.44 _refine_diff_density_min -0.58 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.05(5) _refine_ls_extinction_coef 0.058(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.23 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 197 _refine_ls_number_reflns 1228 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.22 _refine_ls_R_factor_all 0.034 _refine_ls_R_factor_gt 0.034 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0527P)^2^+0.3521P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.092 _refine_ls_wR_factor_ref 0.092 _reflns_number_gt 1226 _reflns_number_total 1228 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bt6505.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21' _cod_database_code 2204263 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu -1.9646 0.5888 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu 0.78210(12) 0.62217(4) 0.22094(10) 0.0328(3) Uani d . 1 Cu O11 0.5925(6) 0.71513(17) 0.2267(5) 0.0289(6) Uani d . 1 O O12 0.5780(9) 0.8239(2) 0.0992(7) 0.0485(10) Uani d . 1 O O13 1.1285(9) 0.6765(2) -0.4130(6) 0.0451(9) Uani d . 1 O N11 1.0333(8) 0.6784(2) 0.0508(6) 0.0275(7) Uani d D 1 N H1N 1.176(10) 0.680(3) 0.158(8) 0.033 Uiso d D 1 H H2N 1.081(11) 0.659(3) -0.056(8) 0.033 Uiso d D 1 H N12 1.1722(9) 0.7923(3) -0.4892(7) 0.0363(9) Uani d D 1 N H3N 1.088(13) 0.830(3) -0.512(12) 0.044 Uiso d D 1 H H4N 1.276(12) 0.787(4) -0.583(9) 0.044 Uiso d D 1 H C11 0.6800(9) 0.7654(2) 0.1141(7) 0.0271(9) Uani d . 1 C C12 0.9237(8) 0.7494(2) -0.0097(7) 0.0239(8) Uani d . 1 C H2A 1.0620 0.7848 0.0319 0.029 Uiso calc R 1 H C13 0.8352(9) 0.7567(3) -0.2569(7) 0.0290(9) Uani d . 1 C H3A 0.6861 0.7251 -0.2971 0.035 Uiso calc R 1 H H3B 0.7748 0.8046 -0.2881 0.035 Uiso calc R 1 H C14 1.0608(9) 0.7393(3) -0.3938(7) 0.0279(9) Uani d . 1 C O21 1.0112(7) 0.53481(19) 0.2708(6) 0.0355(8) Uani d . 1 O O22 1.0387(9) 0.4344(2) 0.4533(7) 0.0442(9) Uani d . 1 O O23 0.5274(8) 0.57414(19) 0.9404(5) 0.0359(7) Uani d . 1 O N21 0.5907(8) 0.5780(2) 0.4653(6) 0.0281(8) Uani d D 1 N H5N 0.564(11) 0.611(3) 0.565(8) 0.034 Uiso d D 1 H H6N 0.452(11) 0.555(3) 0.391(9) 0.034 Uiso d D 1 H N22 0.3578(11) 0.4669(3) 1.0040(9) 0.0463(11) Uani d D 1 N H7N 0.367(15) 0.422(2) 0.996(13) 0.056 Uiso d D 1 H H8N 0.274(14) 0.479(4) 1.112(9) 0.056 Uiso d D 1 H C21 0.9529(9) 0.4945(2) 0.4243(7) 0.0278(9) Uani d . 1 C C22 0.7815(8) 0.5280(2) 0.5880(7) 0.0258(8) Uani d . 1 C H2B 0.9018 0.5566 0.6883 0.031 Uiso calc R 1 H C23 0.6522(9) 0.4753(2) 0.7254(7) 0.0303(9) Uani d . 1 C H3C 0.7882 0.4437 0.7939 0.036 Uiso calc R 1 H H3D 0.5263 0.4471 0.6315 0.036 Uiso calc R 1 H C24 0.5075(9) 0.5095(2) 0.9008(7) 0.0286(9) Uani d . 1 C loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu 0.0370(4) 0.0256(4) 0.0398(4) 0.0090(3) 0.0231(3) 0.0118(3) O11 0.0312(15) 0.0250(15) 0.0327(15) 0.0015(13) 0.0137(12) 0.0023(12) O12 0.059(2) 0.0275(18) 0.065(2) 0.0135(17) 0.034(2) 0.0093(18) O13 0.061(3) 0.0322(19) 0.047(2) 0.0100(18) 0.0274(17) 0.0035(16) N11 0.0302(18) 0.0242(18) 0.0293(18) 0.0052(15) 0.0093(14) 0.0033(15) N12 0.040(2) 0.039(2) 0.032(2) -0.0010(19) 0.0142(17) -0.0002(18) C11 0.032(2) 0.024(2) 0.0268(19) -0.0007(17) 0.0099(16) 0.0002(16) C12 0.0276(19) 0.022(2) 0.0229(18) 0.0006(15) 0.0076(15) 0.0030(14) C13 0.030(2) 0.035(2) 0.0237(19) 0.0046(18) 0.0083(16) 0.0021(16) C14 0.036(2) 0.028(2) 0.0213(18) 0.0012(18) 0.0088(16) -0.0002(16) O21 0.0387(17) 0.0332(17) 0.0387(17) 0.0075(14) 0.0226(14) 0.0059(14) O22 0.050(2) 0.0325(19) 0.055(2) 0.0130(16) 0.0273(18) 0.0070(17) O23 0.053(2) 0.0249(15) 0.0321(16) -0.0028(15) 0.0138(14) -0.0024(13) N21 0.0308(18) 0.0275(19) 0.0277(17) 0.0031(15) 0.0111(14) 0.0010(14) N22 0.062(3) 0.031(2) 0.053(3) -0.006(2) 0.039(2) -0.010(2) C21 0.029(2) 0.028(2) 0.0280(19) -0.0006(17) 0.0122(16) -0.0007(17) C22 0.0273(18) 0.0250(19) 0.0262(19) 0.0013(16) 0.0085(15) 0.0001(16) C23 0.036(2) 0.027(2) 0.031(2) 0.0038(18) 0.0173(18) 0.0011(17) C24 0.036(2) 0.027(2) 0.0251(18) 0.0013(18) 0.0115(16) 0.0012(17) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu O11 . 2.003(3) yes Cu O21 . 2.020(3) yes Cu N11 . 2.029(4) yes Cu N21 . 2.049(4) yes Cu O13 1_556 2.885(4) yes Cu O23 1_554 2.229(4) yes O11 C11 . 1.282(6) yes O12 C11 . 1.219(6) yes O13 C14 . 1.244(6) yes N11 C12 . 1.483(5) yes N11 H1N . 0.92(4) ? N11 H2N . 0.81(4) ? N12 C14 . 1.317(7) yes N12 H3N . 0.84(4) ? N12 H4N . 0.82(4) ? C11 C12 . 1.543(6) yes C12 C13 . 1.543(5) yes C12 H2A . 0.9800 ? C13 C14 . 1.522(6) yes C13 H3A . 0.9700 ? C13 H3B . 0.9700 ? O21 C21 . 1.273(6) yes O22 C21 . 1.222(6) yes O23 C24 . 1.249(6) yes N21 C22 . 1.493(6) yes N21 H5N . 0.90(4) ? N21 H6N . 0.90(4) ? N22 C24 . 1.313(7) yes N22 H7N . 0.86(5) ? N22 H8N . 0.85(5) ? C21 C22 . 1.533(6) yes C22 C23 . 1.501(6) yes C22 H2B . 0.9800 ? C23 C24 . 1.511(6) yes C23 H3C . 0.9700 ? C23 H3D . 0.9700 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O11 Cu O21 . . 168.86(15) yes O11 Cu N11 . . 82.75(14) yes O21 Cu N11 . . 97.44(15) yes O11 Cu N21 . . 94.70(14) yes O21 Cu N21 . . 82.04(14) yes N11 Cu N21 . . 164.02(16) yes O11 Cu O23 . 1_554 97.81(14) yes O21 Cu O23 . 1_554 93.18(15) yes N11 Cu O23 . 1_554 98.80(14) yes N21 Cu O23 . 1_554 97.18(15) yes O23 Cu O13 1_554 1_556 176.61(13) yes O11 Cu O13 . 1_556 85.56(12) yes O21 Cu O13 . 1_556 83.45(13) yes N11 Cu O13 . 1_556 81.82(14) yes N21 Cu O13 . 1_556 82.26(14) yes C11 O11 Cu . . 116.7(3) yes C12 N11 Cu . . 111.6(3) yes C12 N11 H1N . . 113(4) ? Cu N11 H1N . . 97(4) ? C12 N11 H2N . . 110(4) ? Cu N11 H2N . . 116(4) ? H1N N11 H2N . . 109(6) ? C14 N12 H3N . . 119(5) ? C14 N12 H4N . . 125(5) ? H3N N12 H4N . . 109(7) ? O12 C11 O11 . . 123.1(4) yes O12 C11 C12 . . 119.5(4) yes O11 C11 C12 . . 117.4(4) yes N11 C12 C11 . . 110.4(3) yes N11 C12 C13 . . 112.8(3) yes C11 C12 C13 . . 108.0(3) yes N11 C12 H2A . . 108.5 ? C11 C12 H2A . . 108.5 ? C13 C12 H2A . . 108.5 ? C14 C13 C12 . . 111.9(4) yes C14 C13 H3A . . 109.2 ? C12 C13 H3A . . 109.2 ? C14 C13 H3B . . 109.2 ? C12 C13 H3B . . 109.2 ? H3A C13 H3B . . 107.9 ? O13 C14 N12 . . 123.3(5) yes O13 C14 C13 . . 119.2(4) yes N12 C14 C13 . . 117.5(4) yes C21 O21 Cu . . 115.4(3) yes C24 O23 Cu . 1_556 125.3(3) yes C22 N21 Cu . . 107.5(3) yes C22 N21 H5N . . 103(4) ? Cu N21 H5N . . 109(4) ? C22 N21 H6N . . 112(4) ? Cu N21 H6N . . 103(4) ? H5N N21 H6N . . 121(6) ? C24 N22 H7N . . 123(5) ? C24 N22 H8N . . 124(6) ? H7N N22 H8N . . 111(8) ? O22 C21 O21 . . 124.0(4) yes O22 C21 C22 . . 120.3(4) yes O21 C21 C22 . . 115.5(4) yes N21 C22 C23 . . 114.3(4) yes N21 C22 C21 . . 107.9(3) yes C23 C22 C21 . . 113.9(4) yes N21 C22 H2B . . 106.8 ? C23 C22 H2B . . 106.8 ? C21 C22 H2B . . 106.8 ? C22 C23 C24 . . 113.0(4) yes C22 C23 H3C . . 109.0 ? C24 C23 H3C . . 109.0 ? C22 C23 H3D . . 109.0 ? C24 C23 H3D . . 109.0 ? H3C C23 H3D . . 107.8 ? O23 C24 N22 . . 123.0(4) yes O23 C24 C23 . . 121.6(4) yes N22 C24 C23 . . 115.4(4) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion O21 Cu O11 C11 . 98.0(7) N11 Cu O11 C11 . 6.3(3) N21 Cu O11 C11 . 170.4(3) O23 Cu O11 C11 1_554 -91.6(3) O11 Cu N11 C12 . -9.9(3) O21 Cu N11 C12 . -178.7(3) N21 Cu N11 C12 . -91.6(6) O23 Cu N11 C12 1_554 86.9(3) Cu O11 C11 O12 . 178.0(4) Cu O11 C11 C12 . -1.1(5) Cu N11 C12 C11 . 11.6(4) Cu N11 C12 C13 . -109.3(3) O12 C11 C12 N11 . 173.7(4) O11 C11 C12 N11 . -7.2(5) O12 C11 C12 C13 . -62.6(6) O11 C11 C12 C13 . 116.5(4) N11 C12 C13 C14 . -55.8(5) C11 C12 C13 C14 . -178.0(4) C12 C13 C14 O13 . 73.8(6) C12 C13 C14 N12 . -107.2(5) O11 Cu O21 C21 . 71.1(8) N11 Cu O21 C21 . 161.3(3) N21 Cu O21 C21 . -2.6(3) O23 Cu O21 C21 1_554 -99.4(3) O11 Cu N21 C22 . -147.8(3) O21 Cu N21 C22 . 21.5(3) N11 Cu N21 C22 . -67.8(7) O23 Cu N21 C22 1_554 113.7(3) Cu O21 C21 O22 . 167.2(4) Cu O21 C21 C22 . -17.6(5) Cu N21 C22 C23 . -162.1(3) Cu N21 C22 C21 . -34.4(4) O22 C21 C22 N21 . -149.2(4) O21 C21 C22 N21 . 35.5(5) O22 C21 C22 C23 . -21.2(6) O21 C21 C22 C23 . 163.4(4) N21 C22 C23 C24 . -61.2(5) C21 C22 C23 C24 . 174.2(4) Cu O23 C24 N22 1_556 79.4(6) Cu O23 C24 C23 1_556 -101.9(4) C22 C23 C24 O23 . -8.7(7) C22 C23 C24 N22 . 170.2(5) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N11 H1N O11 1_655 0.92(4) 2.20(5) 2.987(5) 143(5) yes N11 H2N O13 . 0.81(4) 2.26(5) 2.944(5) 143(6) yes N12 H3N O22 2_755 0.84(4) 2.11(5) 2.908(7) 158(7) yes N12 H4N O11 1_654 0.82(4) 2.49(5) 3.235(5) 151(6) yes N21 H5N O13 1_456 0.90(4) 2.54(5) 3.135(5) 125(4) yes N21 H5N O23 . 0.90(4) 2.44(5) 2.975(5) 119(5) yes N21 H6N O21 1_455 0.90(4) 2.30(5) 3.141(6) 156(6) yes N22 H7N O12 2_646 0.86(5) 1.97(5) 2.805(6) 165(8) yes N22 H8N O21 1_456 0.85(5) 2.03(5) 2.830(6) 157(7) yes _cod_database_fobs_code 2204263 _journal_paper_doi 10.1107/S1600536804022202