#------------------------------------------------------------------------------ #$Date: 2018-10-05 13:19:55 +0100 (Fri, 05 Oct 2018) $ #$Revision: 211332 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/42/2204284.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204284 loop_ _publ_author_name 'Moghimi, S. Abolghasem' 'Sharif, Mahboubeh A.' 'Aghabozorg, Hossein' _publ_section_title ; Creatininium dipicolinate monohydrate ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1790 _journal_page_last o1792 _journal_paper_doi 10.1107/S1600536804022482 _journal_volume 60 _journal_year 2004 _chemical_formula_moiety 'C4 H8 N3 O +, C7 H4 N O4 -, H2 O' _chemical_formula_sum 'C11 H14 N4 O6' _chemical_formula_weight 298.26 _space_group_IT_number 62 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2c 2n' _symmetry_space_group_name_H-M 'P n a m' _atom_sites_solution_hydrogens mixed _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.485(3) _cell_length_b 15.107(3) _cell_length_c 6.5150(13) _cell_measurement_reflns_used 24 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 11 _cell_measurement_theta_min 10 _cell_volume 1327.2(5) _computing_cell_refinement 'CAD-4 Software (Enraf-Nonius, 1984)' _computing_data_collection 'CAD4 (Enraf-Nonius, 1984)' _computing_data_reduction 'XCAD4 (Harms, 1996)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1998)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.993 _diffrn_measured_fraction_theta_max 0.993 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method '\q-\q scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0131 _diffrn_reflns_av_sigmaI/netI 0.0442 _diffrn_reflns_limit_h_max 21 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 23 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3012 _diffrn_reflns_theta_full 33.96 _diffrn_reflns_theta_max 33.96 _diffrn_reflns_theta_min 2.02 _diffrn_standards_decay_% 2.5 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.123 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.493 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 624 _exptl_crystal_size_max 0.45 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.393 _refine_diff_density_min -0.291 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.030 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 130 _refine_ls_number_reflns 2898 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.030 _refine_ls_R_factor_all 0.1152 _refine_ls_R_factor_gt 0.0483 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0896P)^2^+0.0618P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1357 _refine_ls_wR_factor_ref 0.1624 _reflns_number_gt 1603 _reflns_number_total 2898 _reflns_threshold_expression I>2\s(I) _cod_data_source_file cf6364.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_atom_sites_solution_hydrogens' value 'geom and difmap' was changed to 'mixed'. Automatic conversion script Id: cif_fix_values 6452 2018-10-05 10:23:21Z andrius ; _cod_database_code 2204284 _cod_database_fobs_code 2204284 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z' '-x, -y, z+1/2' 'x+1/2, -y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z' 'x, y, -z-1/2' '-x-1/2, y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol C1 0.09689(11) 0.41937(12) 0.2500 0.0299(4) Uani d S 1 C O1 0.43871(10) 0.44580(11) 0.2500 0.0560(5) Uani d S 1 O O2 0.37232(10) 0.31205(10) 0.2500 0.0467(4) Uani d S 1 O O3 0.02884(9) 0.27545(9) 0.2500 0.0431(4) Uani d S 1 O H1O3 -0.0289 0.2369 0.2500 0.052 Uiso d SR 1 H O4 -0.07581(9) 0.38924(11) 0.2500 0.0482(4) Uani d S 1 O O5 0.91100(11) 0.65500(11) 0.2500 0.0505(4) Uani d S 1 O N1 0.18733(9) 0.38221(9) 0.2500 0.0274(3) Uani d S 1 N N2 0.65486(11) 0.62312(11) 0.2500 0.0370(4) Uani d S 1 N N3 0.79273(11) 0.54497(10) 0.2500 0.0329(3) Uani d S 1 N H1N3 0.8254 0.4993 0.2500 0.039 Uiso d SR 1 H N4 0.64137(11) 0.46844(11) 0.2500 0.0387(4) Uani d S 1 N H2N4 0.6772 0.4142 0.2500 0.046 Uiso d SR 1 H H1N4 0.5712 0.4714 0.2500 0.046 Uiso d SR 1 H C2 0.08199(13) 0.50963(13) 0.2500 0.0423(5) Uani d S 1 C H2A 0.0181 0.5329 0.2500 0.051 Uiso calc SR 1 H C3 0.16321(15) 0.56460(13) 0.2500 0.0464(6) Uani d S 1 C H3A 0.1552 0.6257 0.2500 0.056 Uiso calc SR 1 H C4 0.25624(14) 0.52809(12) 0.2500 0.0367(4) Uani d S 1 C H4A 0.3123 0.5639 0.2500 0.044 Uiso calc SR 1 H C5 0.26502(11) 0.43632(11) 0.2500 0.0277(3) Uani d S 1 C C6 0.36790(12) 0.39522(12) 0.2500 0.0308(4) Uani d S 1 C C7 0.00823(12) 0.35870(13) 0.2500 0.0337(4) Uani d S 1 C C8 0.69129(12) 0.54208(12) 0.2500 0.0302(4) Uani d S 1 C C9 0.82597(14) 0.63143(12) 0.2500 0.0354(4) Uani d S 1 C C10 0.73403(14) 0.68813(12) 0.2500 0.0386(4) Uani d S 1 C H10 0.7301 0.7312 0.1321 0.046 Uiso d R 1 H C11 0.55006(15) 0.64668(16) 0.2500 0.0447(5) Uani d S 1 C H11A 0.5149 0.6109 0.1478 0.067 Uiso d PR 0.50 H H11B 0.5298 0.7066 0.1612 0.067 Uiso d PR 0.50 H H11C 0.5311 0.6605 0.3869 0.067 Uiso d PR 0.50 H O1W 0.72297(15) 0.31002(12) 0.1810(4) 0.0588(9) Uani d P 0.50 O H1W 0.7928 0.3073 0.2500 0.071 Uiso d SR 1 H H2W 0.6783 0.2751 0.2811 0.071 Uiso d PR 0.50 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0207(6) 0.0283(8) 0.0408(10) -0.0002(5) 0.000 0.000 O1 0.0206(6) 0.0465(9) 0.1008(14) -0.0054(5) 0.000 0.000 O2 0.0246(6) 0.0333(7) 0.0821(11) 0.0067(5) 0.000 0.000 O3 0.0253(5) 0.0304(6) 0.0735(11) -0.0062(5) 0.000 0.000 O4 0.0200(5) 0.0444(8) 0.0801(11) 0.0001(5) 0.000 0.000 O5 0.0312(7) 0.0453(8) 0.0749(11) -0.0059(6) 0.000 0.000 N1 0.0192(5) 0.0259(6) 0.0371(8) -0.0013(5) 0.000 0.000 N2 0.0254(6) 0.0303(7) 0.0553(11) 0.0055(5) 0.000 0.000 N3 0.0241(6) 0.0270(7) 0.0475(9) 0.0033(5) 0.000 0.000 N4 0.0264(7) 0.0324(8) 0.0573(11) 0.0009(5) 0.000 0.000 C2 0.0232(7) 0.0318(9) 0.0720(15) 0.0039(6) 0.000 0.000 C3 0.0343(9) 0.0232(8) 0.0815(17) 0.0017(7) 0.000 0.000 C4 0.0305(8) 0.0243(7) 0.0553(12) -0.0043(6) 0.000 0.000 C5 0.0195(6) 0.0271(7) 0.0364(9) -0.0012(5) 0.000 0.000 C6 0.0216(6) 0.0309(8) 0.0399(10) 0.0008(6) 0.000 0.000 C7 0.0219(7) 0.0353(9) 0.0439(10) -0.0012(6) 0.000 0.000 C8 0.0244(7) 0.0318(8) 0.0344(9) 0.0035(6) 0.000 0.000 C9 0.0304(8) 0.0329(9) 0.0430(11) -0.0010(7) 0.000 0.000 C10 0.0343(9) 0.0278(8) 0.0538(12) 0.0016(7) 0.000 0.000 C11 0.0295(8) 0.0500(12) 0.0546(13) 0.0139(8) 0.000 0.000 O1W 0.0417(10) 0.0333(9) 0.101(3) 0.0012(8) 0.0021(11) 0.0030(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle N1 C1 C2 . 123.10(15) N1 C1 C7 . 117.81(15) C2 C1 C7 . 119.08(15) C7 O3 H1O3 . 114.3 C5 N1 C1 . 117.33(14) C8 N2 C10 . 110.75(14) C8 N2 C11 . 126.00(17) C10 N2 C11 . 123.26(16) C8 N3 C9 . 110.76(15) C8 N3 H1N3 . 120.7 C9 N3 H1N3 . 128.5 C8 N4 H2N4 . 118.3 C8 N4 H1N4 . 118.5 H2N4 N4 H1N4 . 123.2 C3 C2 C1 . 118.78(16) C3 C2 H2A . 120.6 C1 C2 H2A . 120.6 C4 C3 C2 . 119.10(17) C4 C3 H3A . 120.5 C2 C3 H3A . 120.5 C3 C4 C5 . 118.62(16) C3 C4 H4A . 120.7 C5 C4 H4A . 120.7 N1 C5 C4 . 123.08(15) N1 C5 C6 . 117.93(15) C4 C5 C6 . 118.99(14) O1 C6 O2 . 125.95(17) O1 C6 C5 . 117.22(17) O2 C6 C5 . 116.83(14) O4 C7 O3 . 124.61(17) O4 C7 C1 . 120.38(18) O3 C7 C1 . 115.01(14) N4 C8 N2 . 126.96(16) N4 C8 N3 . 123.00(16) N2 C8 N3 . 110.04(16) O5 C9 N3 . 126.19(17) O5 C9 C10 . 128.11(17) N3 C9 C10 . 105.70(15) N2 C10 C9 . 102.75(15) N2 C10 H10 . 113.4 C9 C10 H10 . 114.2 N2 C11 H11A . 109.5 N2 C11 H11B . 116.0 H11A C11 H11B . 88.6 N2 C11 H11C . 108.3 H11A C11 H11C . 129.0 H11B C11 H11C . 104.1 O1W O1W H1W 7_556 64.7 O1W O1W H2W 7_556 50.8 H1W O1W H2W . 103.7 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 N1 1.342(2) C1 C2 1.378(3) C1 C7 1.507(2) O1 C6 1.223(2) O2 C6 1.258(2) O3 C7 1.288(2) O3 H1O3 0.973 O4 C7 1.224(2) O5 C9 1.201(2) N1 C5 1.329(2) N2 C8 1.319(2) N2 C10 1.451(2) N2 C11 1.457(3) N3 C8 1.369(2) N3 C9 1.381(2) N3 H1N3 0.819 N4 C8 1.300(2) N4 H2N4 0.951 N4 H1N4 0.948 C2 C3 1.375(3) C2 H2A 0.930 C3 C4 1.370(3) C3 H3A 0.930 C4 C5 1.391(2) C4 H4A 0.930 C5 C6 1.520(2) C9 C10 1.507(3) C10 H10 1.007 C11 H11A 0.9806 C11 H11B 1.108 C11 H11C 0.951 O1W H1W 1.042 O1W H2W 1.032 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H1O3 O2 6_565 0.97 1.52 2.490(2) 172 yes N3 H1N3 O4 1_655 0.82 2.13 2.946(2) 174 yes N4 H2N4 O1W . 0.95 1.75 2.672(3) 163 yes N4 H2N4 O1W 7_556 0.95 1.75 2.672(3) 163 yes N4 H1N4 O1 . 0.95 1.83 2.754(2) 165 yes O1W H1W O2 6_665 1.04 2.10 2.768(2) 120 yes O1W H1W O4 1_655 1.04 2.16 2.999(3) 136 yes O1W H2W O3 6_665 1.03 2.17 2.953(2) 132 yes O1W H2W N1 6_665 1.03 2.39 2.978(3) 115 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C2 C1 N1 C5 0.0 C7 C1 N1 C5 180.0 N1 C1 C2 C3 0.0 C7 C1 C2 C3 180.0 C1 C2 C3 C4 0.0 C2 C3 C4 C5 0.0 C1 N1 C5 C4 0.0 C1 N1 C5 C6 180.0 C3 C4 C5 N1 0.0 C3 C4 C5 C6 180.0 N1 C5 C6 O1 180.0 C4 C5 C6 O1 0.0 N1 C5 C6 O2 0.0 C4 C5 C6 O2 180.0 N1 C1 C7 O4 180.0 C2 C1 C7 O4 0.0 N1 C1 C7 O3 0.0 C2 C1 C7 O3 180.0 C10 N2 C8 N4 180.0 C11 N2 C8 N4 0.0 C10 N2 C8 N3 0.0 C11 N2 C8 N3 180.0 C9 N3 C8 N4 180.0 C9 N3 C8 N2 0.0 C8 N3 C9 O5 180.0 C8 N3 C9 C10 0.0 C8 N2 C10 C9 0.0 C11 N2 C10 C9 180.0 O5 C9 C10 N2 180.0 N3 C9 C10 N2 0.0