#------------------------------------------------------------------------------ #$Date: 2017-10-13 07:09:21 +0100 (Fri, 13 Oct 2017) $ #$Revision: 201973 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/44/2204425.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204425 loop_ _publ_author_name 'Chopra, Reenu' 'Ning Shan' 'Motherwell, W. D. Sam' 'Jones, William' _publ_section_title ; 2-(p-Nitrophenoxy)tetrahydropyran ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1923 _journal_page_last o1924 _journal_paper_doi 10.1107/S1600536804023748 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C11 H13 N O4' _chemical_formula_moiety 'C11 H13 N O4' _chemical_formula_sum 'C11 H13 N O4' _chemical_formula_weight 223.22 _chemical_melting_point 332 _chemical_name_common ; 2-(p-Nitrophenoxy)terahydropyran ; _chemical_name_systematic ; 2-(p-Nitrophenoxy)terahydropyran ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 102.4910(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.47720(10) _cell_length_b 21.9462(4) _cell_length_c 6.78280(10) _cell_measurement_reflns_used 12872 _cell_measurement_temperature 180(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 1.00 _cell_volume 1086.69(3) _computing_cell_refinement 'HKL SCALEPACK (Otwinowski & Minor, 1997)' _computing_data_collection 'COLLECT (Nonius, 1998)' _computing_data_reduction ; HKL Scalepack and DENZO (Otwinowski & Minor 1997) ; _computing_molecular_graphics 'XP (Sheldrick, 1993) and DIAMOND (Brandenburg, 1999)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 180(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Nonius KappaCCD' _diffrn_measurement_method 'Thin-slice \w and \f' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0342 _diffrn_reflns_av_sigmaI/netI 0.0270 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 28 _diffrn_reflns_limit_k_min -28 _diffrn_reflns_limit_l_max 8 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 13336 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.59 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.105 _exptl_absorpt_correction_T_max 0.984 _exptl_absorpt_correction_T_min 0.891 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SORTAV; Blessing, 1995)' _exptl_crystal_colour 'pale yellow' _exptl_crystal_density_diffrn 1.364 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 472 _exptl_crystal_size_max 0.46 _exptl_crystal_size_mid 0.23 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.354 _refine_diff_density_min -0.366 _refine_ls_extinction_coef 0.061(8) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.075 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 146 _refine_ls_number_reflns 2476 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.075 _refine_ls_R_factor_all 0.0587 _refine_ls_R_factor_gt 0.0422 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0567P)^2^+0.2284P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1099 _refine_ls_wR_factor_ref 0.1208 _reflns_number_gt 1970 _reflns_number_total 2476 _reflns_threshold_expression I>2\s(I) _cod_data_source_file ac6124.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2204425 _cod_database_fobs_code 2204425 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.0794(2) 0.31572(6) 0.83905(18) 0.0541(4) Uani d . 1 N O1 -0.08743(19) 0.30900(6) 0.81357(19) 0.0712(4) Uani d . 1 O O2 0.1547(2) 0.36578(5) 0.8542(2) 0.0771(4) Uani d . 1 O O3 0.49426(12) 0.10316(4) 0.89300(14) 0.0412(3) Uani d . 1 O O4 0.74541(13) 0.12513(5) 0.75296(16) 0.0515(3) Uani d . 1 O C1 0.19406(19) 0.26134(6) 0.85389(18) 0.0395(3) Uani d . 1 C C2 0.10857(18) 0.20498(6) 0.83302(19) 0.0382(3) Uani d . 1 C H2 -0.0211 0.2020 0.8097 0.046 Uiso calc R 1 H C3 0.21496(17) 0.15338(6) 0.84666(19) 0.0364(3) Uani d . 1 C H3 0.1585 0.1144 0.8331 0.044 Uiso calc R 1 H C4 0.40482(17) 0.15789(6) 0.88016(18) 0.0350(3) Uani d . 1 C C5 0.48881(18) 0.21476(6) 0.8987(2) 0.0423(3) Uani d . 1 C H5 0.6183 0.2179 0.9199 0.051 Uiso calc R 1 H C6 0.3819(2) 0.26676(6) 0.8859(2) 0.0444(3) Uani d . 1 C H6 0.4376 0.3059 0.8992 0.053 Uiso calc R 1 H C7 0.69021(17) 0.10322(7) 0.9249(2) 0.0462(4) Uani d . 1 C H7 0.7411 0.1306 1.0414 0.055 Uiso calc R 1 H C8 0.7531(2) 0.03892(8) 0.9800(2) 0.0529(4) Uani d . 1 C H8A 0.6943 0.0240 1.0882 0.063 Uiso calc R 1 H H8B 0.8873 0.0389 1.0332 0.063 Uiso calc R 1 H C9 0.7073(2) -0.00382(7) 0.8016(2) 0.0486(4) Uani d . 1 C H9A 0.5732 -0.0103 0.7642 0.058 Uiso calc R 1 H H9B 0.7666 -0.0438 0.8384 0.058 Uiso calc R 1 H C10 0.7730(2) 0.02266(7) 0.6232(2) 0.0504(4) Uani d . 1 C H10A 0.9085 0.0243 0.6542 0.060 Uiso calc R 1 H H10B 0.7325 -0.0037 0.5033 0.060 Uiso calc R 1 H C11 0.6961(2) 0.08599(7) 0.5787(2) 0.0506(4) Uani d . 1 C H11A 0.7432 0.1036 0.4656 0.061 Uiso calc R 1 H H11B 0.5609 0.0837 0.5366 0.061 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0908(10) 0.0414(7) 0.0316(6) 0.0167(7) 0.0162(6) 0.0050(5) O1 0.0788(9) 0.0680(8) 0.0628(8) 0.0356(7) 0.0064(6) 0.0026(6) O2 0.1359(13) 0.0348(6) 0.0680(8) 0.0119(6) 0.0382(8) 0.0075(5) O3 0.0356(5) 0.0401(5) 0.0492(6) 0.0012(3) 0.0121(4) 0.0002(4) O4 0.0435(5) 0.0500(6) 0.0657(7) -0.0119(4) 0.0219(5) -0.0089(5) C1 0.0592(8) 0.0350(7) 0.0253(6) 0.0061(5) 0.0113(5) 0.0018(5) C2 0.0420(7) 0.0421(7) 0.0309(6) 0.0036(5) 0.0085(5) 0.0027(5) C3 0.0399(6) 0.0354(6) 0.0345(6) -0.0028(5) 0.0094(5) 0.0009(5) C4 0.0405(6) 0.0366(6) 0.0291(6) -0.0004(5) 0.0101(5) -0.0007(5) C5 0.0431(7) 0.0464(8) 0.0386(7) -0.0091(5) 0.0117(5) -0.0057(6) C6 0.0657(9) 0.0362(7) 0.0332(7) -0.0112(6) 0.0151(6) -0.0037(5) C7 0.0338(7) 0.0586(9) 0.0446(8) -0.0008(6) 0.0052(5) -0.0105(6) C8 0.0450(7) 0.0688(10) 0.0434(8) 0.0164(7) 0.0063(6) 0.0034(7) C9 0.0473(7) 0.0473(8) 0.0522(8) 0.0113(6) 0.0133(6) 0.0061(6) C10 0.0499(8) 0.0542(9) 0.0499(8) 0.0040(6) 0.0171(6) -0.0048(7) C11 0.0597(9) 0.0501(8) 0.0467(8) -0.0045(6) 0.0218(7) 0.0014(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O2 N1 O1 123.43(14) O2 N1 C1 118.27(15) O1 N1 C1 118.29(13) C4 O3 C7 118.57(10) C7 O4 C11 114.06(11) C6 C1 C2 121.65(12) C6 C1 N1 120.21(13) C2 C1 N1 118.14(13) C3 C2 C1 118.73(12) C3 C2 H2 120.6 C1 C2 H2 120.6 C2 C3 C4 120.47(12) C2 C3 H3 119.8 C4 C3 H3 119.8 O3 C4 C5 125.25(11) O3 C4 C3 114.53(11) C5 C4 C3 120.22(12) C6 C5 C4 119.37(13) C6 C5 H5 120.3 C4 C5 H5 120.3 C1 C6 C5 119.54(12) C1 C6 H6 120.2 C5 C6 H6 120.2 O4 C7 O3 110.46(11) O4 C7 C8 113.22(12) O3 C7 C8 106.88(12) O4 C7 H7 108.7 O3 C7 H7 108.7 C8 C7 H7 108.7 C7 C8 C9 112.19(12) C7 C8 H8A 109.2 C9 C8 H8A 109.2 C7 C8 H8B 109.2 C9 C8 H8B 109.2 H8A C8 H8B 107.9 C8 C9 C10 110.15(13) C8 C9 H9A 109.6 C10 C9 H9A 109.6 C8 C9 H9B 109.6 C10 C9 H9B 109.6 H9A C9 H9B 108.1 C11 C10 C9 109.71(12) C11 C10 H10A 109.7 C9 C10 H10A 109.7 C11 C10 H10B 109.7 C9 C10 H10B 109.7 H10A C10 H10B 108.2 O4 C11 C10 111.43(13) O4 C11 H11A 109.3 C10 C11 H11A 109.3 O4 C11 H11B 109.3 C10 C11 H11B 109.3 H11A C11 H11B 108.0 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 O2 1.2284(18) N1 O1 1.2308(19) N1 C1 1.4600(17) O3 C4 1.3684(15) O3 C7 1.4340(15) O4 C7 1.4033(18) O4 C11 1.4430(18) C1 C6 1.379(2) C1 C2 1.3855(18) C2 C3 1.3754(17) C2 H2 0.9500 C3 C4 1.3918(17) C3 H3 0.9500 C4 C5 1.3905(18) C5 C6 1.385(2) C5 H5 0.9500 C6 H6 0.9500 C7 C8 1.509(2) C7 H7 1.0000 C8 C9 1.511(2) C8 H8A 0.9900 C8 H8B 0.9900 C9 C10 1.517(2) C9 H9A 0.9900 C9 H9B 0.9900 C10 C11 1.510(2) C10 H10A 0.9900 C10 H10B 0.9900 C11 H11A 0.9900 C11 H11B 0.9900 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C2 H2 O4 1_455 0.95 2.40 3.1783(16) 139 yes C7 H7 O1 4_666 1.00 2.41 3.3956(18) 170 yes C9 H9B O2 2_646 0.99 2.52 3.2930(19) 135 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O2 N1 C1 C6 0.57(18) O1 N1 C1 C6 -178.88(12) O2 N1 C1 C2 -178.83(12) O1 N1 C1 C2 1.72(18) C6 C1 C2 C3 0.60(19) N1 C1 C2 C3 179.99(11) C1 C2 C3 C4 -0.21(19) C7 O3 C4 C5 -1.07(18) C7 O3 C4 C3 179.24(10) C2 C3 C4 O3 179.24(11) C2 C3 C4 C5 -0.47(19) O3 C4 C5 C6 -178.91(11) C3 C4 C5 C6 0.77(19) C2 C1 C6 C5 -0.31(19) N1 C1 C6 C5 -179.69(11) C4 C5 C6 C1 -0.4(2) C11 O4 C7 O3 -66.70(15) C11 O4 C7 C8 53.12(15) C4 O3 C7 O4 -69.12(14) C4 O3 C7 C8 167.31(11) O4 C7 C8 C9 -50.17(16) O3 C7 C8 C9 71.68(15) C7 C8 C9 C10 50.86(16) C8 C9 C10 C11 -54.19(16) C7 O4 C11 C10 -57.01(15) C9 C10 C11 O4 56.86(16) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 8903118