#------------------------------------------------------------------------------ #$Date: 2011-09-17 21:27:16 +0100 (Sat, 17 Sep 2011) $ #$Revision: 26029 $ #$URL: svn://www.crystallography.net/cod/cif/2/2204444.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204444 _space_group_IT_number 15 _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _[local]_cod_cif_authors_sg_H-M 'C 2/c' loop_ _publ_author_name 'Shi, Wen-Juan' 'Li, Dan' 'Ng, Seik Weng' _publ_section_title ; trans-Dichlorobis[pyrimidine-2(1H)-thione-\kN^1^]cobalt(II) ; _journal_issue 11 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m1664 _journal_page_last m1665 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Co Cl2 (C4 H4 N2 S)2]' _chemical_formula_moiety 'C8 H8 Cl2 Co N4 S2' _chemical_formula_sum 'C8 H8 Cl2 Co N4 S2' _chemical_formula_weight 354.13 _chemical_name_systematic ; trans-Dichlorobis[pyrimidine-2(1H)-thione-\kN^1^]cobalt(II) ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90 _cell_angle_beta 115.0130(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 12.3690(8) _cell_length_b 8.3050(6) _cell_length_c 13.9204(9) _cell_measurement_reflns_used 2946 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 27.7 _cell_measurement_theta_min 3.1 _cell_volume 1295.9(2) _computing_cell_refinement 'SAINT (Bruker, 2002)' _computing_data_collection 'SMART (Bruker, 2002)' _computing_data_reduction SAINT _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.98 _diffrn_measured_fraction_theta_max 0.98 _diffrn_measurement_device_type 'Bruker APEX area-dectector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.017 _diffrn_reflns_av_sigmaI/netI 0.016 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 5449 _diffrn_reflns_theta_full 27.8 _diffrn_reflns_theta_max 27.84 _diffrn_reflns_theta_min 3.05 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 2.039 _exptl_absorpt_correction_T_max 0.792 _exptl_absorpt_correction_T_min 0.645 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 2002)' _exptl_crystal_colour Blue _exptl_crystal_density_diffrn 1.815 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 708 _exptl_crystal_size_max 0.18 _exptl_crystal_size_mid 0.14 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.32 _refine_diff_density_min -0.25 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.05 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 94 _refine_ls_number_reflns 1518 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 1.05 _refine_ls_R_factor_all 0.028 _refine_ls_R_factor_gt 0.026 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0464P)^2^+0.3426P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.069 _refine_ls_wR_factor_ref 0.071 _reflns_number_gt 1417 _reflns_number_total 1518 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bt6542.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Co1 0.5000 0.85299(4) 0.7500 0.03460(10) Uani d S 1 Co Cl1 0.34264(4) 1.03903(5) 0.70577(3) 0.03700(10) Uani d . 1 Cl S1 0.33306(4) 0.60231(6) 0.63098(4) 0.04010(10) Uani d . 1 S N1 0.50050(10) 0.7716(2) 0.61150(10) 0.0325(3) Uani d . 1 N N2 0.38260(10) 0.6242(2) 0.46140(10) 0.0353(3) Uani d D 1 N C1 0.40820(10) 0.6680(2) 0.56360(10) 0.0304(3) Uani d . 1 C C2 0.5668(2) 0.8175(2) 0.5622(2) 0.0405(4) Uani d D 1 C C3 0.5440(2) 0.7688(2) 0.4601(2) 0.0454(4) Uani d D 1 C C4 0.4467(2) 0.6742(2) 0.40980(10) 0.0417(4) Uani d D 1 C H2n 0.321(2) 0.568(3) 0.426(2) 0.064(7) Uiso d D 1 H H2 0.6340(10) 0.881(2) 0.604(2) 0.045(6) Uiso d D 1 H H3 0.591(2) 0.810(3) 0.427(2) 0.059(7) Uiso d D 1 H H4 0.420(2) 0.640(3) 0.3390(10) 0.050(6) Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Co1 0.0320(2) 0.0457(2) 0.0280(2) 0.000 0.01460(10) 0.000 Cl1 0.0323(2) 0.0412(2) 0.0342(2) 0.0013(2) 0.0109(2) -0.0008(2) S1 0.0359(2) 0.0440(3) 0.0444(3) -0.0041(2) 0.0207(2) -0.0007(2) N1 0.0303(6) 0.0352(7) 0.0313(7) -0.0017(5) 0.0123(5) -0.0011(6) N2 0.0310(7) 0.0371(7) 0.0313(7) 0.0040(6) 0.0069(6) -0.0028(6) C1 0.0260(10) 0.0310(10) 0.0320(10) 0.0050(10) 0.0100(10) 0.0000(10) C2 0.0410(10) 0.0390(10) 0.0460(10) -0.0060(10) 0.0230(10) -0.0010(10) C3 0.0580(10) 0.0440(10) 0.0460(10) 0.0020(10) 0.0340(10) 0.0080(10) C4 0.0520(10) 0.0410(10) 0.0310(10) 0.0120(10) 0.0170(10) 0.0030(10) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Co1 N1 . 2.0450(10) yes Co1 N1 2_656 2.0450(10) no Co1 Cl1 . 2.3540(5) yes Co1 Cl1 2_656 2.3540(5) no S1 C1 . 1.667(2) no N1 C2 . 1.329(2) no N1 C1 . 1.359(2) no N2 C4 . 1.341(3) no N2 C1 . 1.368(2) no C2 C3 . 1.386(3) no C3 C4 . 1.357(3) no N2 H2n . 0.850(10) no C2 H2 . 0.950(10) no C3 H3 . 0.940(10) no C4 H4 . 0.950(10) no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag N1 Co1 N1 . 2_656 141.41(8) yes N1 Co1 Cl1 . . 107.57(4) yes N1 Co1 Cl1 . 2_656 97.58(4) yes N1 Co1 Cl1 2_656 . 97.58(4) no N1 Co1 Cl1 2_656 2_656 107.57(4) no Cl1 Co1 Cl1 . 2_656 97.95(2) yes C2 N1 C1 . . 120.1(2) no C2 N1 Co1 . . 129.90(10) no C1 N1 Co1 . . 109.60(10) no C4 N2 C1 . . 123.0(2) no N1 C1 N2 . . 117.1(2) no N1 C1 S1 . . 118.90(10) no N2 C1 S1 . . 124.00(10) no N1 C2 C3 . . 122.9(2) no C4 C3 C2 . . 116.7(2) no N2 C4 C3 . . 119.9(2) no C4 N2 H2n . . 117(2) no C1 N2 H2n . . 120(2) no N1 C2 H2 . . 114.0(10) no C3 C2 H2 . . 123.0(10) no C4 C3 H3 . . 124(2) no C2 C3 H3 . . 120(2) no N2 C4 H4 . . 116.0(10) no C3 C4 H4 . . 124.0(10) no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion _geom_torsion_publ_flag N1 Co1 N1 C2 2_656 -133.5(2) no Cl1 Co1 N1 C2 2_656 -2.6(2) no Cl1 Co1 N1 C2 . 98.3(2) no N1 Co1 N1 C1 2_656 54.00(10) no Cl1 Co1 N1 C1 2_656 -175.10(10) no Cl1 Co1 N1 C1 . -74.20(10) no C2 N1 C1 N2 . -4.6(2) no Co1 N1 C1 N2 . 168.80(10) no C2 N1 C1 S1 . 175.60(10) no Co1 N1 C1 S1 . -11.1(2) no C4 N2 C1 N1 . 2.5(2) no C4 N2 C1 S1 . -177.70(10) no C1 N1 C2 C3 . 2.4(3) no Co1 N1 C2 C3 . -169.50(10) no N1 C2 C3 C4 . 2.1(3) no C1 N2 C4 C3 . 2.1(3) no C2 C3 C4 N2 . -4.3(3) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2n Cl1 7_566 0.850(10) 2.260(10) 3.088(2) 164(2) yes _cod_database_code 2204444