#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2204518.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204518 loop_ _publ_author_name 'Shallard-Brown, Howard A.' 'Harding, Christopher C.' 'Watkin, David J.' 'Soengas, Raquel' 'Skytte, Ulla P.' 'Fleet, George W. J.' _publ_section_title ; 2,3:5,6-Di-O-isopropylidene-2-C-hydroxymethyl-D-talono-1,4-lactone ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o2163 _journal_page_last o2164 _journal_volume 60 _journal_year 2004 _chemical_formula_moiety 'C13 H20 O7' _chemical_formula_sum 'C13 H20 O7' _chemical_formula_weight 288.30 _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _audit_creation_method CRYSTALS_ver_12.39 _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 7.8609(3) _cell_length_b 10.7470(4) _cell_length_c 16.5516(6) _cell_measurement_reflns_used 1577 _cell_measurement_temperature 190 _cell_measurement_theta_max 27 _cell_measurement_theta_min 5 _cell_volume 1398.30(9) _computing_cell_refinement DENZO/SCALEPACK _computing_data_collection 'COLLECT (Nonius BV, 1997)' _computing_data_reduction 'DENZO/SCALEPACK (Otwinowski & Minor, 1996)' _computing_molecular_graphics 'CAMERON (Watkin et al., 1996)' _computing_publication_material CRYSTALS _computing_structure_refinement 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 190 _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.972 _diffrn_measurement_device_type 'Nonius KappaCCD' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.013 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -21 _diffrn_reflns_number 2981 _diffrn_reflns_theta_full 26.104 _diffrn_reflns_theta_max 27.478 _diffrn_reflns_theta_min 5.187 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.111 _exptl_absorpt_correction_T_max 0.98 _exptl_absorpt_correction_T_min 0.97 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(DENZO/SCALEPACK; Otwinowski & Minor, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.369 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 616 _exptl_crystal_size_max 0.65 _exptl_crystal_size_mid 0.25 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.26 _refine_diff_density_min -0.23 _refine_ls_extinction_method None _refine_ls_goodness_of_fit_ref 0.9219 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 181 _refine_ls_number_reflns 1803 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0419 _refine_ls_R_factor_gt 0.0333 _refine_ls_shift/su_max 0.000174 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(F)+0.028 +0.385P], where P = [max(F~o~^2^,0)+2F~c~^2^]/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.0735 _refine_ls_wR_factor_gt 0.0698 _refine_ls_wR_factor_ref 0.0735 _reflns_number_gt 1544 _reflns_number_total 1804 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file hg6094.cif _[local]_cod_data_source_block 1 _cod_database_code 2204518 loop_ _symmetry_equiv_pos_as_xyz x,y,z x+1/2,-y+1/2,-z -x,y+1/2,-z+1/2 -x+1/2,-y,z+1/2 loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_type_symbol C1 0.5577(2) 0.41009(18) 0.13539(11) 0.0255 Uani 1.0000 C C2 0.4493(2) 0.46106(17) 0.20459(10) 0.0242 Uani 1.0000 C C3 0.4697(3) 0.36718(17) 0.27347(11) 0.0257 Uani 1.0000 C C4 0.5906(2) 0.41013(19) 0.33943(11) 0.0277 Uani 1.0000 C O5 0.75307(17) 0.43700(13) 0.30500(8) 0.0319 Uani 1.0000 O C6 0.8851(3) 0.37695(19) 0.35196(11) 0.0297 Uani 1.0000 C O7 0.80175(19) 0.34335(14) 0.42604(8) 0.0336 Uani 1.0000 O C8 0.6298(3) 0.3145(2) 0.40505(12) 0.0314 Uani 1.0000 C C9 0.9493(3) 0.2631(2) 0.30810(13) 0.0378 Uani 1.0000 C C10 1.0224(3) 0.4706(2) 0.36946(15) 0.0418 Uani 1.0000 C O11 0.53763(19) 0.25469(12) 0.23691(8) 0.0303 Uani 1.0000 O C12 0.5999(3) 0.27713(18) 0.16246(12) 0.0300 Uani 1.0000 C O13 0.6742(2) 0.19899(14) 0.12498(9) 0.0466 Uani 1.0000 O O14 0.28029(17) 0.46392(13) 0.17367(7) 0.0326 Uani 1.0000 O C15 0.2752(2) 0.41027(19) 0.09403(11) 0.0281 Uani 1.0000 C O16 0.44814(17) 0.40904(13) 0.06706(7) 0.0283 Uani 1.0000 O C17 0.1748(3) 0.4956(2) 0.03974(12) 0.0334 Uani 1.0000 C C18 0.2023(3) 0.2800(2) 0.09667(14) 0.0412 Uani 1.0000 C C19 0.7181(3) 0.4807(2) 0.11313(13) 0.0328 Uani 1.0000 C O20 0.6840(2) 0.60645(13) 0.09396(8) 0.0384 Uani 1.0000 O H21 0.4815 0.5438 0.2213 0.0277 Uiso 1.0000 H H31 0.3573 0.3459 0.2967 0.0300 Uiso 1.0000 H H41 0.5457 0.4871 0.3628 0.0331 Uiso 1.0000 H H81 0.5588 0.3269 0.4530 0.0368 Uiso 1.0000 H H82 0.6180 0.2274 0.3840 0.0363 Uiso 1.0000 H H91 1.0395 0.2233 0.3412 0.0452 Uiso 1.0000 H H92 0.8567 0.2039 0.2983 0.0454 Uiso 1.0000 H H93 0.9972 0.2931 0.2570 0.0453 Uiso 1.0000 H H101 1.1156 0.4318 0.4015 0.0496 Uiso 1.0000 H H102 0.9762 0.5389 0.4013 0.0491 Uiso 1.0000 H H103 1.0713 0.5046 0.3186 0.0498 Uiso 1.0000 H H171 0.1653 0.4613 -0.0154 0.0402 Uiso 1.0000 H H172 0.0586 0.5091 0.0606 0.0408 Uiso 1.0000 H H173 0.2317 0.5765 0.0361 0.0403 Uiso 1.0000 H H181 0.2114 0.2441 0.0426 0.0484 Uiso 1.0000 H H182 0.2692 0.2298 0.1368 0.0481 Uiso 1.0000 H H183 0.0817 0.2850 0.1126 0.0487 Uiso 1.0000 H H191 0.7955 0.4778 0.1597 0.0391 Uiso 1.0000 H H192 0.7723 0.4376 0.0670 0.0387 Uiso 1.0000 H H1 0.6637 0.6131 0.0465 0.0686 Uiso 1.0000 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0251(9) 0.0275(9) 0.0238(9) 0.0017(9) -0.0013(8) -0.0007(8) C2 0.0233(8) 0.0238(9) 0.0255(9) 0.0010(9) -0.0021(8) -0.0022(7) C3 0.0285(10) 0.0236(9) 0.0251(9) 0.0004(9) 0.0010(9) -0.0017(8) C4 0.0299(10) 0.0282(10) 0.0251(9) 0.0027(9) 0.0011(8) -0.0016(8) O5 0.0283(7) 0.0376(7) 0.0299(7) -0.0010(7) -0.0018(6) 0.0059(6) C6 0.0309(10) 0.0329(10) 0.0253(9) 0.0018(9) -0.0029(9) 0.0016(8) O7 0.0343(7) 0.0415(8) 0.0251(7) 0.0004(7) -0.0028(6) 0.0004(6) C8 0.0330(10) 0.0368(11) 0.0245(9) 0.0003(10) -0.0001(9) 0.0021(8) C9 0.0371(11) 0.0395(11) 0.0369(11) 0.0040(11) 0.0016(10) -0.0038(10) C10 0.0356(11) 0.0445(13) 0.0454(12) -0.0052(11) -0.0084(11) -0.0009(11) O11 0.0413(8) 0.0213(6) 0.0283(7) 0.0003(7) -0.0001(7) -0.0008(5) C12 0.0335(10) 0.0277(10) 0.0287(10) 0.0040(9) -0.0033(9) -0.0027(8) O13 0.0621(11) 0.0401(8) 0.0377(8) 0.0207(9) 0.0012(8) -0.0096(7) O14 0.0256(7) 0.0462(8) 0.0261(7) 0.0081(7) -0.0024(6) -0.0065(6) C15 0.0269(9) 0.0332(10) 0.0242(9) -0.0022(10) 0.0008(8) -0.0018(8) O16 0.0257(6) 0.0370(7) 0.0223(6) 0.0012(7) 0.0000(5) -0.0014(6) C17 0.0279(10) 0.0426(12) 0.0297(10) -0.0003(10) -0.0045(9) 0.0004(9) C18 0.0431(13) 0.0412(12) 0.0394(11) -0.0087(12) 0.0015(11) 0.0017(10) C19 0.0264(10) 0.0397(11) 0.0322(10) -0.0026(10) -0.0007(9) 0.0031(9) O20 0.0462(9) 0.0385(8) 0.0306(7) -0.0123(8) -0.0028(7) 0.0065(6) loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C 0.0033 0.0016 'International Tables Vol C 4.2.6.8 and 6.1.1.4' H 0.0000 0.0000 'International Tables Vol C 4.2.6.8 and 6.1.1.4' O 0.0106 0.0060 'International Tables Vol C 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 C1 C12 103.61(15) no C2 C1 O16 105.14(14) no C12 C1 O16 110.86(15) no C2 C1 C19 117.78(16) no C12 C1 C19 110.91(16) no O16 C1 C19 108.32(15) no C1 C2 C3 105.26(15) no C1 C2 O14 104.97(14) no C3 C2 O14 112.33(16) no C1 C2 H21 113.439 no C3 C2 H21 111.502 no O14 C2 H21 109.170 no C2 C3 C4 113.61(16) no C2 C3 O11 106.07(13) no C4 C3 O11 108.78(15) no C2 C3 H31 110.304 no C4 C3 H31 110.477 no O11 C3 H31 107.301 no C3 C4 O5 109.52(15) no C3 C4 C8 115.63(16) no O5 C4 C8 103.88(15) no C3 C4 H41 108.333 no O5 C4 H41 107.994 no C8 C4 H41 111.181 no C4 O5 C6 109.68(13) no O5 C6 O7 104.06(15) no O5 C6 C9 110.03(16) no O7 C6 C9 111.06(17) no O5 C6 C10 108.64(17) no O7 C6 C10 109.34(16) no C9 C6 C10 113.29(18) no C6 O7 C8 106.18(14) no C4 C8 O7 102.53(16) no C4 C8 H81 111.741 no O7 C8 H81 108.162 no C4 C8 H82 111.239 no O7 C8 H82 111.980 no H81 C8 H82 110.888 no C6 C9 H91 108.835 no C6 C9 H92 110.979 no H91 C9 H92 109.980 no C6 C9 H93 106.107 no H91 C9 H93 110.057 no H92 C9 H93 110.800 no C6 C10 H101 110.508 no C6 C10 H102 109.925 no H101 C10 H102 107.531 no C6 C10 H103 111.096 no H101 C10 H103 108.681 no H102 C10 H103 109.013 no C3 O11 C12 111.42(14) no C1 C12 O11 110.81(16) no C1 C12 O13 127.44(18) no O11 C12 O13 121.73(18) no C2 O14 C15 110.28(13) no O14 C15 O16 105.25(14) no O14 C15 C17 108.47(16) no O16 C15 C17 108.49(15) no O14 C15 C18 110.78(16) no O16 C15 C18 111.11(17) no C17 C15 C18 112.46(17) no C15 O16 C1 109.10(14) no C15 C17 H171 111.309 no C15 C17 H172 111.435 no H171 C17 H172 107.957 no C15 C17 H173 109.723 no H171 C17 H173 107.997 no H172 C17 H173 108.303 no C15 C18 H181 108.134 no C15 C18 H182 108.548 no H181 C18 H182 110.829 no C15 C18 H183 108.724 no H181 C18 H183 109.643 no H182 C18 H183 110.889 no C1 C19 O20 112.00(17) no C1 C19 H191 107.952 no O20 C19 H191 108.905 no C1 C19 H192 108.151 no O20 C19 H192 110.815 no H191 C19 H192 108.928 no C19 O20 H1 109.949 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 C2 1.529(3) no C1 C12 1.534(3) no C1 O16 1.421(2) no C1 C19 1.517(3) no C2 C3 1.531(3) no C2 O14 1.424(2) no C2 H21 0.965 no C3 C4 1.519(3) no C3 O11 1.454(2) no C3 H31 0.990 no C4 O5 1.428(2) no C4 C8 1.527(3) no C4 H41 0.979 no O5 C6 1.449(2) no C6 O7 1.437(2) no C6 C9 1.509(3) no C6 C10 1.504(3) no O7 C8 1.430(3) no C8 H81 0.979 no C8 H82 1.003 no C9 H91 0.994 no C9 H92 0.981 no C9 H93 0.980 no C10 H101 0.996 no C10 H102 0.974 no C10 H103 0.996 no O11 C12 1.348(2) no C12 O13 1.196(2) no O14 C15 1.439(2) no C15 O16 1.431(2) no C15 C17 1.507(3) no C15 C18 1.513(3) no C17 H171 0.987 no C17 H172 0.987 no C17 H173 0.979 no C18 H181 0.976 no C18 H182 1.005 no C18 H183 0.986 no C19 O20 1.414(3) no C19 H191 0.983 no C19 H192 0.989 no O20 H1 0.805 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O20 H1 O7 4_664 0.80 2.07 2.833(3) 159.42(6) no