#------------------------------------------------------------------------------ #$Date: 2008-02-08 10:23:56 +0000 (Fri, 08 Feb 2008) $ #$Revision: 101 $ #$URL: svn://www.crystallography.net/cod/cif/2/2204541.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2204541 loop_ _publ_author_name 'G\"orbitz, Carl Henrik' _publ_section_title ; Ammonium L-alanyl-L-phenylalaninate ; _journal_issue 11 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o2065 _journal_page_last o2067 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'N1 H4 +, C12 H15 N2 O3 -' _chemical_formula_moiety 'N1 H4 +, C12 H15 N2 O3 -' _chemical_formula_sum 'C12 H19 N3 O3' _chemical_formula_weight 253.30 _chemical_name_systematic ; Ammonium L-alanyl-L-phenylalaninate ; _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 92.248(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.0494(12) _cell_length_b 6.4253(9) _cell_length_c 12.950(2) _cell_measurement_reflns_used 1233 _cell_measurement_temperature 105(2) _cell_measurement_theta_max 25.06 _cell_measurement_theta_min 2.53 _cell_volume 669.27(17) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Bruker, 2000)' _diffrn_ambient_temperature 105(2) _diffrn_detector_area_resol_mean 8.3 _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'Siemens SMART CCD' _diffrn_measurement_method 'Sets of exposures each taken over 0.3\% \w rotation' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0398 _diffrn_reflns_av_sigmaI/netI 0.0370 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -6 _diffrn_reflns_number 2193 _diffrn_reflns_theta_full 25.06 _diffrn_reflns_theta_max 25.06 _diffrn_reflns_theta_min 2.53 _diffrn_standards_decay_% none _exptl_absorpt_coefficient_mu 0.091 _exptl_absorpt_correction_T_max 0.9833 _exptl_absorpt_correction_T_min 0.8416 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.257 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 272 _exptl_crystal_size_max 0.370 _exptl_crystal_size_mid 0.250 _exptl_crystal_size_min 0.185 _refine_diff_density_max 0.169 _refine_diff_density_min -0.165 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.025 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 187 _refine_ls_number_reflns 1297 _refine_ls_number_restraints 7 _refine_ls_restrained_S_all 1.023 _refine_ls_R_factor_all 0.0416 _refine_ls_R_factor_gt 0.0326 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0513P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0770 _refine_ls_wR_factor_ref 0.0816 _reflns_number_gt 1128 _reflns_number_total 1297 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file lh6291.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.5580(2) 0.6712(3) 0.38745(13) 0.0257(4) Uani d . 1 O O2 0.1563(2) 0.9561(3) 0.32938(14) 0.0270(4) Uani d . 1 O O3 0.1427(2) 0.6590(3) 0.41793(12) 0.0225(4) Uani d . 1 O N1 0.5289(3) 0.1227(4) 0.3283(2) 0.0339(6) Uani d . 1 N H1 0.596(4) 0.007(6) 0.330(3) 0.051 Uiso d . 1 H H2 0.461(4) 0.069(6) 0.369(3) 0.051 Uiso d . 1 H N2 0.3772(3) 0.4814(4) 0.28944(16) 0.0204(5) Uani d . 1 N H4 0.357(3) 0.374(5) 0.264(2) 0.024 Uiso d . 1 H C1 0.6163(3) 0.3050(4) 0.3695(2) 0.0227(6) Uani d . 1 C H11 0.639(3) 0.293(5) 0.442(2) 0.027 Uiso d . 1 H C2 0.7807(3) 0.3253(4) 0.3155(2) 0.0272(6) Uani d . 1 C H21 0.8470 0.1992 0.3275 0.041 Uiso calc R 1 H H22 0.8420 0.4461 0.3431 0.041 Uiso calc R 1 H H23 0.7585 0.3438 0.2411 0.041 Uiso calc R 1 H C3 0.5142(3) 0.5011(4) 0.34980(17) 0.0194(6) Uani d . 1 C C4 0.2762(3) 0.6573(4) 0.25487(17) 0.0213(5) Uani d . 1 C H41 0.3485 0.7603 0.2201 0.026 Uiso calc R 1 H C5 0.1398(3) 0.5824(5) 0.17705(19) 0.0283(6) Uani d . 1 C H51 0.0651 0.4863 0.2129 0.034 Uiso calc R 1 H H52 0.0728 0.7041 0.1538 0.034 Uiso calc R 1 H C6 0.2031(3) 0.4732(5) 0.08310(18) 0.0235(6) Uani d . 1 C C7 0.3015(3) 0.5772(5) 0.01410(19) 0.0284(6) Uani d . 1 C H71 0.3328 0.7174 0.0276 0.034 Uiso calc R 1 H C8 0.3545(4) 0.4802(6) -0.0738(2) 0.0358(7) Uani d . 1 C H81 0.4215 0.5539 -0.1203 0.043 Uiso calc R 1 H C9 0.3102(3) 0.2756(5) -0.0944(2) 0.0375(8) Uani d . 1 C H91 0.3458 0.2094 -0.1553 0.045 Uiso calc R 1 H C10 0.2146(3) 0.1684(5) -0.0263(2) 0.0345(7) Uani d . 1 C H101 0.1847 0.0278 -0.0401 0.041 Uiso calc R 1 H C11 0.1615(3) 0.2657(5) 0.0624(2) 0.0286(6) Uani d . 1 C H111 0.0965 0.1905 0.1094 0.034 Uiso calc R 1 H C12 0.1870(3) 0.7673(4) 0.34264(17) 0.0199(6) Uani d . 1 C N1A 0.8477(3) 0.7501(4) 0.51525(16) 0.0210(5) Uani d D 1 N H1A 0.850(4) 0.649(4) 0.5658(18) 0.031 Uiso d D 1 H H2A 0.847(4) 0.876(4) 0.546(2) 0.031 Uiso d D 1 H H3A 0.753(3) 0.727(5) 0.475(2) 0.031 Uiso d D 1 H H4A 0.948(3) 0.733(5) 0.4819(19) 0.031 Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0251(9) 0.0211(10) 0.0305(9) 0.0016(8) -0.0051(7) -0.0034(8) O2 0.0314(10) 0.0222(11) 0.0278(9) 0.0040(9) 0.0069(8) -0.0005(8) O3 0.0235(9) 0.0229(9) 0.0218(9) 0.0025(8) 0.0078(7) 0.0006(8) N1 0.0279(13) 0.0184(13) 0.0564(16) -0.0029(11) 0.0147(11) -0.0021(12) N2 0.0185(10) 0.0190(10) 0.0238(10) -0.0013(10) 0.0027(8) -0.0063(10) C1 0.0245(13) 0.0207(13) 0.0231(12) 0.0029(12) 0.0044(10) 0.0022(11) C2 0.0213(13) 0.0252(15) 0.0352(14) 0.0017(12) 0.0042(11) -0.0039(12) C3 0.0194(13) 0.0231(14) 0.0163(11) -0.0024(11) 0.0065(10) 0.0009(11) C4 0.0173(11) 0.0249(13) 0.0220(12) 0.0015(12) 0.0034(9) -0.0038(12) C5 0.0181(13) 0.0410(16) 0.0259(13) 0.0029(13) 0.0018(10) -0.0084(13) C6 0.0157(11) 0.0333(15) 0.0212(12) 0.0044(13) -0.0019(10) -0.0041(12) C7 0.0300(15) 0.0291(14) 0.0257(13) 0.0013(13) -0.0029(12) -0.0013(12) C8 0.0318(15) 0.0523(19) 0.0234(13) 0.0036(16) 0.0026(11) 0.0006(14) C9 0.0305(15) 0.053(2) 0.0290(14) 0.0103(15) -0.0009(12) -0.0175(14) C10 0.0308(14) 0.0323(15) 0.0394(15) 0.0031(14) -0.0102(12) -0.0130(14) C11 0.0234(13) 0.0324(16) 0.0298(13) -0.0010(13) -0.0020(11) -0.0017(13) C12 0.0150(11) 0.0228(15) 0.0220(12) 0.0006(11) -0.0001(10) -0.0022(11) N1A 0.0177(10) 0.0230(11) 0.0224(11) -0.0008(10) 0.0026(8) -0.0018(10) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C3 1.242(3) O2 C12 1.249(3) O3 C12 1.261(3) N1 C1 1.457(3) N1 H1 0.92(4) N1 H2 0.85(4) N2 C3 1.333(3) N2 C4 1.452(3) N2 H4 0.78(3) C1 C3 1.520(3) C1 C2 1.527(3) C1 H11 0.95(3) C2 H21 0.9800 C2 H22 0.9800 C2 H23 0.9800 C4 C5 1.538(3) C4 C12 1.540(3) C4 H41 1.0000 C5 C6 1.510(4) C5 H51 0.9900 C5 H52 0.9900 C6 C7 1.388(4) C6 C11 1.398(4) C7 C8 1.380(4) C7 H71 0.9500 C8 C9 1.386(5) C8 H81 0.9500 C9 C10 1.377(4) C9 H91 0.9500 C10 C11 1.390(4) C10 H101 0.9500 C11 H111 0.9500 N1A H1A 0.92(2) N1A H2A 0.90(2) N1A H3A 0.92(2) N1A H4A 0.94(2) loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 N1 H1 112(2) C1 N1 H2 114(3) H1 N1 H2 93(3) C3 N2 C4 123.2(2) C3 N2 H4 119(2) C4 N2 H4 117(2) N1 C1 C3 110.8(2) N1 C1 C2 108.4(2) C3 C1 C2 108.9(2) N1 C1 H11 111.6(18) C3 C1 H11 108.3(18) C2 C1 H11 108.9(16) C1 C2 H21 109.5 C1 C2 H22 109.5 H21 C2 H22 109.5 C1 C2 H23 109.5 H21 C2 H23 109.5 H22 C2 H23 109.5 O1 C3 N2 121.9(2) O1 C3 C1 121.3(2) N2 C3 C1 116.7(2) N2 C4 C5 109.6(2) N2 C4 C12 113.65(19) C5 C4 C12 106.58(19) N2 C4 H41 109.0 C5 C4 H41 109.0 C12 C4 H41 109.0 C6 C5 C4 114.7(2) C6 C5 H51 108.6 C4 C5 H51 108.6 C6 C5 H52 108.6 C4 C5 H52 108.6 H51 C5 H52 107.6 C7 C6 C11 118.3(2) C7 C6 C5 120.9(3) C11 C6 C5 120.8(3) C8 C7 C6 121.1(3) C8 C7 H71 119.5 C6 C7 H71 119.5 C7 C8 C9 120.1(3) C7 C8 H81 119.9 C9 C8 H81 119.9 C10 C9 C8 119.8(3) C10 C9 H91 120.1 C8 C9 H91 120.1 C9 C10 C11 120.1(3) C9 C10 H101 119.9 C11 C10 H101 119.9 C10 C11 C6 120.5(3) C10 C11 H111 119.7 C6 C11 H111 119.7 O2 C12 O3 125.6(2) O2 C12 C4 116.1(2) O3 C12 C4 118.1(2) H1A N1A H2A 109(3) H1A N1A H3A 106(3) H2A N1A H3A 112(3) H1A N1A H4A 104(3) H2A N1A H4A 109(3) H3A N1A H4A 115(2) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag N1 C1 C3 N2 -7.9(3) yes C1 C3 N2 C4 -173.5(2) yes C3 N2 C4 C12 -67.3(3) yes N2 C4 C12 O2 152.1(2) yes N2 C4 C5 C6 -57.8(3) yes C4 C5 C6 C7 -62.9(3) yes C4 C5 C6 C11 118.2(3) yes C4 N2 C3 O1 5.8(3) ? N1 C1 C3 O1 172.8(2) ? C2 C1 C3 O1 -68.1(3) ? C2 C1 C3 N2 111.2(2) ? C3 N2 C4 C5 173.7(2) ? C12 C4 C5 C6 178.8(2) ? C11 C6 C7 C8 1.3(4) ? C5 C6 C7 C8 -177.6(2) ? C6 C7 C8 C9 -0.2(4) ? C7 C8 C9 C10 -0.7(4) ? C8 C9 C10 C11 0.4(4) ? C9 C10 C11 C6 0.7(4) ? C7 C6 C11 C10 -1.5(4) ? C5 C6 C11 C10 177.4(2) ? C5 C4 C12 O2 -87.1(3) ? N2 C4 C12 O3 -31.9(3) ? C5 C4 C12 O3 88.9(3) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O1 1_545 0.92(4) 2.31(4) 3.007(3) 133(3) y N1 H2 O2 1_545 0.85(4) 2.59(4) 3.185(3) 129(3) y N2 H4 N1 1_555 0.78(3) 2.27(3) 2.648(3) 111(2) y C1 H11 O3 2_646 0.95(3) 2.62(3) 3.435(3) 144(2) y N1A H1A O2 2_646 0.92(2) 1.84(2) 2.761(3) 176(3) y N1A H2A O3 2_656 0.90(2) 1.88(2) 2.766(3) 168(3) y N1A H3A O1 1_555 0.92(2) 1.93(2) 2.851(3) 178(3) y N1A H4A O3 1_655 0.94(2) 1.86(2) 2.794(3) 172(3) y