#------------------------------------------------------------------------------ #$Date: 2016-02-20 03:06:23 +0000 (Sat, 20 Feb 2016) $ #$Revision: 176774 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/45/2204565.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204565 loop_ _publ_author_name 'Wu, Hui' 'Zhou, Jun' 'Yu, Hui-Zhen' 'Lu, Lei-Lei' 'Xu, Zhou' 'Yu, Kai-Bei' 'Shi, Da-Qing' _publ_section_title ; N,N'-Di-2-pyridylmethylenediamine ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o2085 _journal_page_last o2086 _journal_paper_doi 10.1107/S1600536804025929 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C11 H12 N4' _chemical_formula_moiety 'C11 H12 N4' _chemical_formula_sum 'C11 H12 N4' _chemical_formula_weight 200.25 _chemical_name_systematic ; N,N'-Di-2-pyridylmethylenediamine ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 99.72(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 17.960(4) _cell_length_b 5.7230(10) _cell_length_c 20.419(4) _cell_measurement_reflns_used 38 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 13.71 _cell_measurement_theta_min 3.83 _cell_volume 2068.6(7) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1994)' _computing_data_reduction 'SHELXTL (Sheldrick, 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution SHELXTL _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Siemens P4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0244 _diffrn_reflns_av_sigmaI/netI 0.0549 _diffrn_reflns_limit_h_max 21 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 24 _diffrn_reflns_limit_l_min -24 _diffrn_reflns_number 2229 _diffrn_reflns_theta_full 25.25 _diffrn_reflns_theta_max 25.25 _diffrn_reflns_theta_min 2.02 _diffrn_standards_decay_% 3.69 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.082 _exptl_absorpt_correction_type none _exptl_crystal_colour white _exptl_crystal_density_diffrn 1.286 _exptl_crystal_density_meas ? _exptl_crystal_density_method . _exptl_crystal_description rhombohedral _exptl_crystal_F_000 848 _exptl_crystal_size_max 0.62 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.146 _refine_diff_density_min -0.119 _refine_ls_extinction_coef 0.0065(6) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXTL (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 0.812 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 145 _refine_ls_number_reflns 1873 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 0.811 _refine_ls_R_factor_all 0.0792 _refine_ls_R_factor_gt 0.0393 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0407P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0788 _refine_ls_wR_factor_ref 0.0880 _reflns_number_gt 1057 _reflns_number_total 1873 _reflns_threshold_expression I>2\s(I) _cod_data_source_file rz6008.cif _cod_data_source_block I _cod_original_cell_volume 2068.8(7) _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2204565 _cod_database_fobs_code 2204565 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.34502(9) 0.9466(3) 0.34080(8) 0.0533(5) Uani d . 1 N N2 0.26994(10) 0.7053(3) 0.39203(8) 0.0548(5) Uani d D 1 N N3 0.31646(10) 0.3312(3) 0.43926(8) 0.0545(5) Uani d D 1 N N4 0.35483(9) 0.5755(3) 0.52878(7) 0.0519(5) Uani d . 1 N C1 0.38397(12) 0.9842(4) 0.29101(11) 0.0626(6) Uani d . 1 C H1 0.4082 1.1274 0.2901 0.075 Uiso calc R 1 H C2 0.39061(12) 0.8288(4) 0.24194(10) 0.0598(6) Uani d . 1 C H2 0.4189 0.8632 0.2090 0.072 Uiso calc R 1 H C3 0.35379(11) 0.6187(4) 0.24308(9) 0.0563(6) Uani d . 1 C H3 0.3561 0.5089 0.2099 0.068 Uiso calc R 1 H C4 0.31379(10) 0.5705(3) 0.29278(8) 0.0474(5) Uani d . 1 C H4 0.2891 0.4282 0.2940 0.057 Uiso calc R 1 H C5 0.31077(10) 0.7390(3) 0.34175(8) 0.0439(5) Uani d . 1 C C6 0.25273(11) 0.4773(4) 0.41543(9) 0.0560(6) Uani d . 1 C H6A 0.2237 0.4972 0.4510 0.067 Uiso calc R 1 H H6B 0.2208 0.3963 0.3795 0.067 Uiso calc R 1 H C7 0.36757(10) 0.3840(3) 0.49489(9) 0.0450(5) Uani d . 1 C C8 0.42917(12) 0.2399(4) 0.51489(10) 0.0634(6) Uani d . 1 C H8 0.4362 0.1063 0.4908 0.076 Uiso calc R 1 H C9 0.47930(13) 0.2963(5) 0.57024(11) 0.0769(7) Uani d . 1 C H9 0.5211 0.2018 0.5842 0.092 Uiso calc R 1 H C10 0.46790(12) 0.4931(5) 0.60536(10) 0.0678(7) Uani d . 1 C H10 0.5017 0.5355 0.6432 0.081 Uiso calc R 1 H C11 0.40581(12) 0.6247(4) 0.58340(9) 0.0594(6) Uani d . 1 C H11 0.3979 0.7574 0.6076 0.071 Uiso calc R 1 H H3N 0.3285(10) 0.218(2) 0.4145(7) 0.052(6) Uiso d D 1 H H2N 0.2787(11) 0.816(3) 0.4208(8) 0.071(7) Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0599(11) 0.0466(11) 0.0498(10) 0.0070(9) -0.0009(9) -0.0027(9) N2 0.0667(12) 0.0583(13) 0.0398(9) 0.0117(10) 0.0105(9) -0.0058(9) N3 0.0631(12) 0.0548(12) 0.0442(10) 0.0123(10) 0.0055(9) -0.0085(9) N4 0.0518(10) 0.0608(11) 0.0419(9) 0.0088(9) 0.0040(8) -0.0087(9) C1 0.0571(14) 0.0576(15) 0.0696(15) -0.0041(12) 0.0006(12) 0.0066(13) C2 0.0565(13) 0.0698(16) 0.0544(12) 0.0044(12) 0.0137(10) 0.0049(12) C3 0.0618(14) 0.0615(15) 0.0460(12) 0.0097(12) 0.0104(10) -0.0099(11) C4 0.0511(12) 0.0480(12) 0.0422(11) 0.0011(10) 0.0051(9) -0.0073(10) C5 0.0432(11) 0.0486(12) 0.0367(10) 0.0121(10) -0.0023(8) -0.0021(10) C6 0.0517(13) 0.0744(15) 0.0409(11) 0.0021(12) 0.0051(9) -0.0027(11) C7 0.0501(12) 0.0492(12) 0.0379(10) 0.0042(10) 0.0137(9) 0.0036(10) C8 0.0679(14) 0.0611(14) 0.0615(13) 0.0224(13) 0.0122(12) 0.0027(12) C9 0.0590(15) 0.098(2) 0.0711(15) 0.0319(15) 0.0045(13) 0.0125(15) C10 0.0535(14) 0.0962(19) 0.0491(13) 0.0016(14) -0.0042(11) 0.0021(13) C11 0.0624(14) 0.0701(15) 0.0452(11) 0.0022(13) 0.0072(11) -0.0076(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C5 N1 C1 116.84(18) ? C5 N2 C6 123.16(17) yes C5 N2 H2N 110.3(14) ? C6 N2 H2N 117.8(14) ? C7 N3 C6 122.55(17) yes C7 N3 H3N 116.6(12) ? C6 N3 H3N 119.9(12) ? C7 N4 C11 116.61(17) ? N1 C1 C2 125.0(2) ? N1 C1 H1 117.5 ? C2 C1 H1 117.5 ? C1 C2 C3 117.2(2) ? C1 C2 H2 121.4 ? C3 C2 H2 121.4 ? C4 C3 C2 120.26(19) ? C4 C3 H3 119.9 ? C2 C3 H3 119.9 ? C3 C4 C5 118.74(19) ? C3 C4 H4 120.6 ? C5 C4 H4 120.6 ? N1 C5 N2 116.13(18) yes N1 C5 C4 121.91(18) ? N2 C5 C4 121.91(19) yes N3 C6 N2 115.88(17) yes N3 C6 H6A 108.3 ? N2 C6 H6A 108.3 ? N3 C6 H6B 108.3 ? N2 C6 H6B 108.3 ? H6A C6 H6B 107.4 ? N4 C7 N3 117.48(17) yes N4 C7 C8 122.25(18) ? N3 C7 C8 120.26(19) yes C9 C8 C7 119.2(2) ? C9 C8 H8 120.4 ? C7 C8 H8 120.4 ? C8 C9 C10 119.6(2) ? C8 C9 H9 120.2 ? C10 C9 H9 120.2 ? C11 C10 C9 118.1(2) ? C11 C10 H10 121.0 ? C9 C10 H10 121.0 ? N4 C11 C10 124.3(2) ? N4 C11 H11 117.9 ? C10 C11 H11 117.9 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag N1 C5 1.339(2) no N1 C1 1.345(2) no N2 C5 1.372(2) yes N2 C6 1.441(2) yes N2 H2N 0.862(9) no N3 C7 1.368(2) yes N3 C6 1.434(2) yes N3 H3N 0.872(9) no N4 C7 1.336(2) no N4 C11 1.348(2) no C1 C2 1.360(3) no C1 H1 0.9300 no C2 C3 1.374(3) no C2 H2 0.9300 no C3 C4 1.367(2) no C3 H3 0.9300 no C4 C5 1.397(2) no C4 H4 0.9300 no C6 H6A 0.9700 no C6 H6B 0.9700 no C7 C8 1.385(3) no C8 C9 1.360(3) no C8 H8 0.9300 no C9 C10 1.369(3) no C9 H9 0.9300 no C10 C11 1.357(3) no C10 H10 0.9300 no C11 H11 0.9300 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N3 H3N N1 1_545 0.872(9) 2.217(14) 3.082(2) 171.7(12) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C5 N1 C1 C2 0.4(3) no N1 C1 C2 C3 0.9(3) no C1 C2 C3 C4 -1.3(3) no C2 C3 C4 C5 0.5(3) no C1 N1 C5 N2 -178.66(16) no C1 N1 C5 C4 -1.3(2) no C6 N2 C5 N1 -157.00(17) no C6 N2 C5 C4 25.6(3) no C3 C4 C5 N1 0.9(3) no C3 C4 C5 N2 178.10(17) no C7 N3 C6 N2 65.8(2) no C5 N2 C6 N3 57.9(2) no C11 N4 C7 N3 -179.96(17) no C11 N4 C7 C8 1.0(3) no C6 N3 C7 N4 2.4(3) no C6 N3 C7 C8 -178.45(17) no N4 C7 C8 C9 -1.1(3) no N3 C7 C8 C9 179.82(19) no C7 C8 C9 C10 0.3(3) no C8 C9 C10 C11 0.5(3) no C7 N4 C11 C10 -0.1(3) ? C9 C10 C11 N4 -0.7(3) ?