#------------------------------------------------------------------------------ #$Date: 2016-02-20 03:06:23 +0000 (Sat, 20 Feb 2016) $ #$Revision: 176774 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/45/2204575.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204575 loop_ _publ_author_name 'Meza, Rosa-Luisa' 'Quintero, Leticia' 'Bern\`es, Sylvain' _publ_section_title ; Se-Phenyl 3-(1H-indol-3-yl)selenoacrylate ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1961 _journal_page_last o1963 _journal_paper_doi 10.1107/S1600536804024687 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C17 H13 N O Se' _chemical_formula_moiety 'C17 H13 N O Se' _chemical_formula_sum 'C17 H13 N O Se' _chemical_formula_weight 326.24 _chemical_melting_point 437 _chemical_name_systematic ; Se-Phenyl 3-(1H-indol-3-yl)selenoacrylate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXTL-Plus _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 15.7845(16) _cell_length_b 10.0900(13) _cell_length_c 18.629(3) _cell_measurement_reflns_used 69 _cell_measurement_temperature 296.0(10) _cell_measurement_theta_max 12.52 _cell_measurement_theta_min 4.56 _cell_volume 2967.0(7) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1996)' _computing_data_reduction XSCANS _computing_molecular_graphics 'SHELXTL-Plus and MERCURY (Bruno et al., 2002)' _computing_publication_material SHELXTL-Plus _computing_structure_refinement SHELXTL-Plus _computing_structure_solution 'SHELXTL-Plus (Sheldrick, 1998)' _diffrn_ambient_temperature 296.0(10) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker P4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.052 _diffrn_reflns_av_sigmaI/netI 0.066 _diffrn_reflns_limit_h_max 1 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 1 _diffrn_reflns_limit_l_min -22 _diffrn_reflns_number 5420 _diffrn_reflns_theta_full 25.0 _diffrn_reflns_theta_max 25.0 _diffrn_reflns_theta_min 2.2 _diffrn_standards_decay_% 1 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 2.525 _exptl_absorpt_correction_T_max 0.667 _exptl_absorpt_correction_T_min 0.428 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(XSCANS; Siemens, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.461 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 1312 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.21 _refine_diff_density_min -0.30 _refine_ls_extinction_coef 0.0011(2) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXTL-Plus _refine_ls_goodness_of_fit_ref 0.97 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 191 _refine_ls_number_reflns 2603 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.97 _refine_ls_R_factor_all 0.121 _refine_ls_R_factor_gt 0.045 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0405P)^2^+0.2818P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.086 _refine_ls_wR_factor_ref 0.108 _reflns_number_gt 1314 _reflns_number_total 2603 _reflns_threshold_expression I>2\s(I)' _cod_data_source_file tk6191.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2204575 _cod_database_fobs_code 2204575 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Se1 0.2752(4) 0.0353(6) 0.2835(2) 0.0810(9) Uani d P 0.50 Se Se2 0.2755(4) -0.0020(6) 0.3017(3) 0.1068(15) Uani d P 0.50 Se C1 0.3234(2) 0.1129(4) 0.3712(2) 0.0612(10) Uani d . 1 C O1 0.28119(17) 0.1858(3) 0.40701(16) 0.0896(9) Uani d . 1 O C2 0.4131(2) 0.0869(4) 0.3817(2) 0.0611(10) Uani d . 1 C H2A 0.4410 0.0283 0.3513 0.073 Uiso calc R 1 H C3 0.4558(3) 0.1459(4) 0.4344(2) 0.0630(11) Uani d . 1 C H3A 0.4245 0.2035 0.4629 0.076 Uiso calc R 1 H C4 0.5434(3) 0.1329(4) 0.4531(2) 0.0635(11) Uani d . 1 C C5 0.5805(3) 0.2085(4) 0.5056(2) 0.0829(13) Uani d . 1 C H5A 0.5526 0.2722 0.5329 0.099 Uiso calc R 1 H N6 0.6635(3) 0.1771(4) 0.5122(2) 0.0900(12) Uani d . 1 N H6A 0.6984 0.2129 0.5419 0.108 Uiso calc R 1 H C7 0.7603(3) 0.0150(6) 0.4520(3) 0.0993(17) Uani d . 1 C H7A 0.8089 0.0387 0.4771 0.119 Uiso calc R 1 H C8 0.7617(3) -0.0836(6) 0.4024(3) 0.0975(16) Uani d . 1 C H8A 0.8122 -0.1278 0.3932 0.117 Uiso calc R 1 H C9 0.6886(3) -0.1201(5) 0.3648(3) 0.0864(14) Uani d . 1 C H9A 0.6912 -0.1891 0.3318 0.104 Uiso calc R 1 H C10 0.6127(3) -0.0555(4) 0.3758(2) 0.0710(12) Uani d . 1 C H10A 0.5646 -0.0800 0.3502 0.085 Uiso calc R 1 H C11 0.6089(3) 0.0474(4) 0.4260(2) 0.0611(11) Uani d . 1 C C12 0.6832(3) 0.0797(5) 0.4641(3) 0.0729(12) Uani d . 1 C C13 0.1592(3) 0.0597(4) 0.3053(2) 0.0706(12) Uani d . 1 C C14 0.1233(3) 0.1661(5) 0.2717(3) 0.0929(15) Uani d . 1 C H14A 0.1564 0.2224 0.2439 0.111 Uiso calc R 1 H C15 0.0364(4) 0.1900(6) 0.2794(3) 0.1043(17) Uani d . 1 C H15A 0.0115 0.2627 0.2572 0.125 Uiso calc R 1 H C16 -0.0113(3) 0.1057(7) 0.3198(3) 0.1049(18) Uani d . 1 C H16A -0.0691 0.1204 0.3247 0.126 Uiso calc R 1 H C17 0.0247(3) 0.0022(5) 0.3523(3) 0.1109(19) Uani d . 1 C H17A -0.0083 -0.0542 0.3802 0.133 Uiso calc R 1 H C18 0.1099(4) -0.0222(4) 0.3450(3) 0.0945(15) Uani d . 1 C H18A 0.1339 -0.0954 0.3675 0.113 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Se1 0.0539(11) 0.119(3) 0.0705(12) 0.0130(14) -0.0004(10) -0.0277(11) Se2 0.0644(13) 0.125(3) 0.131(4) 0.0287(17) -0.029(2) -0.063(2) C1 0.052(2) 0.068(3) 0.064(3) 0.001(2) 0.009(2) 0.002(2) O1 0.0672(18) 0.112(2) 0.090(2) 0.0257(18) 0.0040(18) -0.0280(19) C2 0.052(2) 0.071(3) 0.060(3) 0.001(2) 0.008(2) -0.005(2) C3 0.072(3) 0.062(3) 0.055(3) -0.003(2) 0.004(2) -0.003(2) C4 0.066(3) 0.062(3) 0.063(3) -0.017(2) -0.011(2) 0.007(2) C5 0.091(3) 0.079(3) 0.079(3) -0.021(3) -0.011(3) 0.004(3) N6 0.091(3) 0.093(3) 0.086(3) -0.035(2) -0.028(3) 0.007(2) C7 0.066(4) 0.138(5) 0.094(4) -0.025(4) -0.020(3) 0.039(4) C8 0.062(3) 0.128(5) 0.102(4) 0.002(3) 0.004(3) 0.043(4) C9 0.065(3) 0.103(4) 0.092(4) 0.005(3) 0.009(3) 0.018(3) C10 0.056(3) 0.080(3) 0.077(3) -0.007(2) -0.004(2) 0.004(2) C11 0.057(3) 0.059(3) 0.068(3) -0.017(2) -0.012(2) 0.011(2) C12 0.064(3) 0.078(3) 0.077(3) -0.023(3) -0.012(3) 0.020(3) C13 0.056(2) 0.076(3) 0.079(3) 0.004(2) -0.006(2) -0.016(2) C14 0.102(4) 0.080(3) 0.097(4) 0.002(3) 0.005(3) -0.006(3) C15 0.110(4) 0.099(4) 0.104(4) 0.045(4) -0.029(4) -0.013(3) C16 0.063(3) 0.124(5) 0.128(5) 0.014(3) -0.021(3) -0.042(4) C17 0.076(4) 0.095(4) 0.161(6) -0.009(3) 0.008(4) -0.006(4) C18 0.091(4) 0.075(3) 0.118(4) 0.012(3) -0.010(4) 0.003(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Se Se -0.0929 2.2259 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 0 2 -2 1 -2 -3 1 2 3 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 Se1 C13 98.2(3) yes C1 Se2 C13 99.0(3) yes O1 C1 C2 125.3(4) yes O1 C1 Se1 119.6(3) yes O1 C1 Se2 122.4(4) yes C2 C1 Se1 114.6(3) yes C2 C1 Se2 111.7(3) yes C1 C2 C3 120.8(4) yes C3 C2 H2A 119.6 no C1 C2 H2A 119.6 no C2 C3 C4 128.9(4) yes C2 C3 H3A 115.6 no C4 C3 H3A 115.6 no C5 C4 C3 122.4(4) no C5 C4 C11 106.1(4) no C3 C4 C11 131.6(4) no N6 C5 C4 110.3(4) no N6 C5 H5A 124.8 no C4 C5 H5A 124.8 no C5 N6 C12 109.2(4) yes C5 N6 H6A 125.4 no C12 N6 H6A 125.4 no C8 C7 C12 117.7(5) no C8 C7 H7A 121.2 no C12 C7 H7A 121.2 no C7 C8 C9 121.4(5) no C7 C8 H8A 119.3 no C9 C8 H8A 119.3 no C10 C9 C8 121.2(5) no C10 C9 H9A 119.4 no C8 C9 H9A 119.4 no C9 C10 C11 119.2(4) no C9 C10 H10A 120.4 no C11 C10 H10A 120.4 no C10 C11 C12 118.2(4) no C10 C11 C4 135.3(4) no C12 C11 C4 106.4(4) no N6 C12 C7 129.7(5) no N6 C12 C11 107.9(4) no C7 C12 C11 122.4(5) no C18 C13 C14 119.4(4) no C18 C13 Se1 126.5(4) no C14 C13 Se1 114.0(4) no C18 C13 Se2 111.5(4) no C14 C13 Se2 129.1(4) no C13 C14 C15 119.7(5) no C13 C14 H14A 120.1 no C15 C14 H14A 120.1 no C16 C15 C14 119.4(5) no C16 C15 H15A 120.3 no C14 C15 H15A 120.3 no C17 C16 C15 120.3(5) no C17 C16 H16A 119.9 no C15 C16 H16A 119.9 no C16 C17 C18 120.8(5) no C16 C17 H17A 119.6 no C18 C17 H17A 119.6 no C13 C18 C17 120.5(5) no C13 C18 H18A 119.8 no C17 C18 H18A 119.8 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Se1 C1 1.965(7) yes Se1 C13 1.892(7) yes Se2 C1 1.894(8) yes Se2 C13 1.940(8) yes C1 O1 1.196(4) yes C1 C2 1.454(5) yes C2 C3 1.331(5) yes C2 H2A 0.9300 no C3 C4 1.433(5) yes C3 H3A 0.9300 no C4 C5 1.372(5) yes C4 C11 1.437(5) no C5 N6 1.353(5) yes C5 H5A 0.9300 no N6 C12 1.366(5) yes N6 H6A 0.8600 no C7 C8 1.359(6) no C7 C12 1.400(6) no C7 H7A 0.9300 no C8 C9 1.398(6) no C8 H8A 0.9300 no C9 C10 1.379(5) no C9 H9A 0.9300 no C10 C11 1.399(5) no C10 H10A 0.9300 no C11 C12 1.408(5) yes C13 C18 1.355(6) no C13 C14 1.366(6) no C14 C15 1.400(6) no C14 H14A 0.9300 no C15 C16 1.362(6) no C15 H15A 0.9300 no C16 C17 1.334(6) no C16 H16A 0.9300 no C17 C18 1.374(7) no C17 H17A 0.9300 no C18 H18A 0.9300 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N6 H6A O1 4_556 0.86 1.91 2.762(5) 169 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C13 Se1 C1 O1 -19.7(4) no Se2 Se1 C1 C2 82.0(13) no C13 Se1 C1 C2 167.3(3) no Se1 Se2 C1 O1 83.8(14) no C13 Se2 C1 O1 6.8(4) no Se1 Se2 C1 C2 -104.4(13) no C13 Se2 C1 C2 178.7(3) no O1 C1 C2 C3 -0.2(6) no Se1 C1 C2 C3 172.3(3) no Se2 C1 C2 C3 -171.7(3) no C1 C2 C3 C4 179.9(4) no C2 C3 C4 C5 174.7(4) no C2 C3 C4 C11 -5.7(7) no C3 C4 C5 N6 -179.6(3) no C11 C4 C5 N6 0.7(5) no C4 C5 N6 C12 -0.1(5) no C12 C7 C8 C9 -0.3(7) no C7 C8 C9 C10 1.2(7) no C8 C9 C10 C11 -0.6(7) no C9 C10 C11 C12 -0.8(6) no C9 C10 C11 C4 -177.9(4) no C5 C4 C11 C10 176.3(4) no C3 C4 C11 C10 -3.3(8) no C5 C4 C11 C12 -1.1(4) no C3 C4 C11 C12 179.3(4) no C5 N6 C12 C7 -179.0(4) no C5 N6 C12 C11 -0.6(5) no C8 C7 C12 N6 177.1(4) no C8 C7 C12 C11 -1.1(7) no C10 C11 C12 N6 -176.9(3) no C4 C11 C12 N6 1.0(4) no C10 C11 C12 C7 1.7(6) no C4 C11 C12 C7 179.6(4) no Se2 Se1 C13 C18 -10.6(17) no C1 Se1 C13 C18 -84.7(5) no Se2 Se1 C13 C14 174.9(14) no C1 Se1 C13 C14 100.9(4) no C1 Se1 C13 Se2 -74.1(14) no Se1 Se2 C13 C18 170.8(14) no C1 Se2 C13 C18 -100.8(4) no Se1 Se2 C13 C14 -6.0(17) no C1 Se2 C13 C14 82.4(5) no C1 Se2 C13 Se1 88.4(15) no C18 C13 C14 C15 0.8(7) no Se1 C13 C14 C15 175.6(4) no Se2 C13 C14 C15 177.4(4) no C13 C14 C15 C16 -0.7(8) no C14 C15 C16 C17 0.7(8) no C15 C16 C17 C18 -0.7(9) no C14 C13 C18 C17 -0.8(7) no Se1 C13 C18 C17 -175.0(5) no Se2 C13 C18 C17 -178.0(5) no C16 C17 C18 C13 0.8(8) no