#------------------------------------------------------------------------------ #$Date: 2016-02-20 03:06:23 +0000 (Sat, 20 Feb 2016) $ #$Revision: 176774 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/46/2204683.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204683 loop_ _publ_author_name 'Huang, Ling' 'Tang, Shi-Hua' 'Fang, Xiao-Niu' 'Zeng, Xi-Rui' _publ_section_title ; [2,6-Bis(2-pyridylamino)pyridine]dichlorocadmium(II) ; _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m1963 _journal_page_last m1965 _journal_paper_doi 10.1107/S1600536804030351 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Cd Cl2 (C15 H13 N5)]' _chemical_formula_moiety 'C15 H13 Cd Cl2 N5' _chemical_formula_sum 'C15 H13 Cd Cl2 N5' _chemical_formula_weight 446.60 _chemical_name_common Dichloro(tripyridyldiamine)cadmium(II) _chemical_name_systematic ; (Tripyridyldiamino) Cadmium(II) chloride ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 111.6440(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.7545(2) _cell_length_b 23.8945(6) _cell_length_c 9.4462(2) _cell_measurement_reflns_used 6805 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 27.50 _cell_measurement_theta_min 2.47 _cell_volume 1626.88(7) _computing_cell_refinement 'SAINT (Bruker, 2000)' _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL-Plus _computing_publication_material SHELXTL-Plus _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXTL-Plus (Sheldrick, 1997)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker SMART CCD area detector' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0232 _diffrn_reflns_av_sigmaI/netI 0.0221 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 31 _diffrn_reflns_limit_k_min -28 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 14214 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.47 _diffrn_standards_decay_% 0 _exptl_absorpt_coefficient_mu 1.676 _exptl_absorpt_correction_T_max 0.920 _exptl_absorpt_correction_T_min 0.523 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour 'light yellow' _exptl_crystal_density_diffrn 1.823 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 880 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.40 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.459 _refine_diff_density_min -0.460 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.005 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 208 _refine_ls_number_reflns 3733 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.005 _refine_ls_R_factor_all 0.0364 _refine_ls_R_factor_gt 0.0256 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0393P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0610 _refine_ls_wR_factor_ref 0.0638 _reflns_number_gt 3041 _reflns_number_total 3733 _reflns_threshold_expression I>2\s(I) _cod_data_source_file fl6135.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M P21/n _cod_database_code 2204683 _cod_database_fobs_code 2204683 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cd 0.79628(2) 0.118856(7) 0.358316(19) 0.03802(7) Uani d . 1 Cd Cl1 0.50408(9) 0.17001(3) 0.31309(8) 0.04857(16) Uani d . 1 Cl Cl2 0.82879(10) 0.08008(3) 0.12019(7) 0.04954(16) Uani d . 1 Cl N1 0.7068(3) 0.03135(8) 0.4048(2) 0.0408(5) Uani d . 1 N N2 0.9272(3) 0.02042(8) 0.6543(2) 0.0441(5) Uani d . 1 N H2A 0.9928 -0.0058 0.7113 0.053 Uiso calc R 1 H N3 0.9538(3) 0.11920(7) 0.6209(2) 0.0355(4) Uani d . 1 N N4 0.9809(3) 0.21834(8) 0.6022(2) 0.0462(5) Uani d . 1 N H4A 0.9252 0.2442 0.6324 0.055 Uiso calc R 1 H N5 0.9904(3) 0.19277(8) 0.3648(2) 0.0410(5) Uani d . 1 N C1 0.5705(4) 0.00782(11) 0.2847(3) 0.0509(6) Uani d . 1 C H1A 0.5136 0.0297 0.1986 0.061 Uiso calc R 1 H C2 0.5118(4) -0.04642(12) 0.2829(3) 0.0564(7) Uani d . 1 C H2B 0.4191 -0.0612 0.1974 0.068 Uiso calc R 1 H C3 0.5948(4) -0.07829(12) 0.4120(3) 0.0579(7) Uani d . 1 C H3A 0.5584 -0.1152 0.4150 0.069 Uiso calc R 1 H C4 0.7303(4) -0.05540(10) 0.5351(3) 0.0498(6) Uani d . 1 C H4B 0.7859 -0.0764 0.6232 0.060 Uiso calc R 1 H C5 0.7853(3) -0.00014(10) 0.5281(3) 0.0367(5) Uani d . 1 C C6 0.9895(3) 0.07341(10) 0.7111(3) 0.0369(5) Uani d . 1 C C7 1.0919(4) 0.07581(11) 0.8666(3) 0.0497(6) Uani d . 1 C H7A 1.1176 0.0433 0.9249 0.060 Uiso calc R 1 H C8 1.1545(4) 0.12635(12) 0.9328(3) 0.0581(7) Uani d . 1 C H8A 1.2213 0.1288 1.0371 0.070 Uiso calc R 1 H C9 1.1173(4) 0.17412(11) 0.8429(3) 0.0496(6) Uani d . 1 C H9A 1.1580 0.2090 0.8861 0.059 Uiso calc R 1 H C10 1.0191(3) 0.16910(10) 0.6889(3) 0.0383(5) Uani d . 1 C C11 1.0208(3) 0.23093(9) 0.4749(3) 0.0386(5) Uani d . 1 C C12 1.0887(4) 0.28420(10) 0.4628(3) 0.0470(6) Uani d . 1 C H12A 1.1093 0.3102 0.5405 0.056 Uiso calc R 1 H C13 1.1246(4) 0.29764(11) 0.3358(3) 0.0537(7) Uani d . 1 C H13A 1.1690 0.3330 0.3261 0.064 Uiso calc R 1 H C14 1.0944(4) 0.25833(11) 0.2215(3) 0.0524(6) Uani d . 1 C H14A 1.1181 0.2665 0.1341 0.063 Uiso calc R 1 H C15 1.0287(4) 0.20709(11) 0.2414(3) 0.0473(6) Uani d . 1 C H15A 1.0093 0.1804 0.1653 0.057 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd 0.04771(11) 0.02865(10) 0.03528(10) -0.00282(7) 0.01248(7) -0.00121(7) Cl1 0.0540(3) 0.0398(3) 0.0531(4) 0.0083(3) 0.0211(3) 0.0120(3) Cl2 0.0746(4) 0.0366(3) 0.0368(3) 0.0014(3) 0.0199(3) -0.0014(2) N1 0.0481(11) 0.0316(10) 0.0411(11) -0.0041(8) 0.0146(9) -0.0015(9) N2 0.0521(11) 0.0336(11) 0.0407(11) 0.0027(9) 0.0102(9) 0.0033(9) N3 0.0409(10) 0.0301(10) 0.0363(10) -0.0017(8) 0.0153(8) -0.0023(8) N4 0.0676(14) 0.0292(11) 0.0483(12) -0.0017(9) 0.0290(11) -0.0063(9) N5 0.0485(11) 0.0352(11) 0.0422(11) -0.0038(9) 0.0200(9) -0.0058(9) C1 0.0569(15) 0.0459(15) 0.0428(14) -0.0085(12) 0.0101(12) 0.0014(12) C2 0.0655(17) 0.0509(16) 0.0499(16) -0.0227(13) 0.0179(14) -0.0107(13) C3 0.0776(19) 0.0397(15) 0.0589(18) -0.0197(14) 0.0283(15) -0.0064(13) C4 0.0681(17) 0.0350(14) 0.0495(15) -0.0060(12) 0.0254(13) 0.0049(11) C5 0.0438(12) 0.0324(12) 0.0375(12) -0.0023(10) 0.0192(10) -0.0016(10) C6 0.0409(12) 0.0339(12) 0.0390(12) 0.0001(9) 0.0183(10) -0.0016(10) C7 0.0664(17) 0.0427(15) 0.0364(13) 0.0017(12) 0.0149(12) 0.0000(11) C8 0.0701(18) 0.0591(19) 0.0366(14) -0.0028(14) 0.0099(13) -0.0072(13) C9 0.0603(15) 0.0430(15) 0.0424(14) -0.0103(12) 0.0155(12) -0.0135(12) C10 0.0427(12) 0.0344(12) 0.0410(13) -0.0038(10) 0.0192(10) -0.0068(10) C11 0.0404(12) 0.0312(12) 0.0427(13) -0.0005(9) 0.0136(10) -0.0036(10) C12 0.0568(15) 0.0318(13) 0.0501(15) -0.0055(11) 0.0171(12) -0.0040(11) C13 0.0596(16) 0.0362(14) 0.0651(18) -0.0070(12) 0.0227(14) 0.0060(13) C14 0.0595(16) 0.0483(16) 0.0548(16) -0.0030(13) 0.0273(13) 0.0057(13) C15 0.0570(15) 0.0437(14) 0.0479(14) -0.0052(12) 0.0272(13) -0.0053(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N1 Cd N5 158.84(7) yes N1 Cd N3 82.90(7) yes N5 Cd N3 83.57(7) yes N1 Cd Cl1 99.27(5) yes N5 Cd Cl1 100.01(5) yes N3 Cd Cl1 105.69(5) yes N1 Cd Cl2 88.43(5) yes N5 Cd Cl2 91.49(5) ? N3 Cd Cl2 139.83(5) ? Cl1 Cd Cl2 114.43(2) yes C5 N1 C1 117.5(2) ? C5 N1 Cd 127.53(15) ? C1 N1 Cd 114.54(16) ? C5 N2 C6 135.3(2) ? C6 N3 C10 117.2(2) ? C6 N3 Cd 125.08(14) ? C10 N3 Cd 117.69(15) ? C11 N4 C10 128.7(2) ? C11 N5 C15 117.9(2) ? C11 N5 Cd 117.96(15) ? C15 N5 Cd 121.39(16) ? N1 C1 C2 123.7(3) ? C1 C2 C3 117.8(3) ? C4 C3 C2 119.7(3) ? C3 C4 C5 119.5(2) ? N1 C5 N2 121.1(2) ? N1 C5 C4 121.8(2) ? N2 C5 C4 117.1(2) ? N3 C6 C7 122.5(2) ? N3 C6 N2 122.2(2) ? C7 C6 N2 115.3(2) ? C8 C7 C6 119.3(2) ? C7 C8 C9 119.3(3) ? C10 C9 C8 119.0(2) ? N3 C10 C9 122.7(2) ? N3 C10 N4 119.9(2) ? C9 C10 N4 117.4(2) ? N5 C11 N4 119.8(2) ? N5 C11 C12 121.4(2) ? N4 C11 C12 118.8(2) ? C13 C12 C11 119.4(2) ? C12 C13 C14 119.7(2) ? C15 C14 C13 117.7(3) ? N5 C15 C14 124.0(2) ? C5 N2 H2A 112.37 ? C6 N2 H2A 112.38 ? C10 N4 H4A 115.65 ? C11 N4 H4A 115.68 ? N1 C1 H1A 118.11 ? C2 C1 H1A 118.17 ? C1 C2 H2B 121.07 ? C3 C2 H2B 121.14 ? C2 C3 H3A 120.19 ? C4 C3 H3A 120.16 ? C3 C4 H4B 120.28 ? C5 C4 H4B 120.23 ? C6 C7 H7A 120.36 ? C8 C7 H7A 120.36 ? C7 C8 H8A 120.40 ? C9 C8 H8A 120.33 ? C8 C9 H9A 120.53 ? C10 C9 H9A 120.51 ? C11 C12 H12A 120.28 ? C13 C12 H12A 120.34 ? C12 C13 H13A 120.21 ? C14 C13 H13A 120.14 ? C13 C14 H14A 121.19 ? C15 C14 H14A 121.08 ? N5 C15 H15A 117.98 ? C14 C15 H15A 118.05 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cd N1 2.2958(19) yes Cd N5 2.3067(19) yes Cd N3 2.3254(19) yes Cd Cl1 2.4691(6) yes Cd Cl2 2.5298(6) yes N1 C5 1.331(3) ? N1 C1 1.354(3) ? N2 C5 1.380(3) ? N2 C6 1.391(3) ? N3 C6 1.352(3) ? N3 C10 1.361(3) ? N4 C11 1.381(3) ? N4 C10 1.401(3) ? N5 C11 1.337(3) ? N5 C15 1.349(3) ? C1 C2 1.372(4) ? C2 C3 1.380(4) ? C3 C4 1.362(4) ? C4 C5 1.397(3) ? C6 C7 1.389(3) ? C7 C8 1.364(4) ? C8 C9 1.388(4) ? C9 C10 1.376(3) ? C11 C12 1.398(3) ? C12 C13 1.366(4) ? C13 C14 1.384(4) ? C14 C15 1.366(4) ? N2 H2A 0.8597 ? N4 H4A 0.8606 ? C1 H1A 0.9299 ? C2 H2B 0.9303 ? C3 H3A 0.9296 ? C4 H4B 0.9304 ? C7 H7A 0.9303 ? C8 H8A 0.9306 ? C9 H9A 0.9305 ? C12 H12A 0.9294 ? C13 H13A 0.9296 ? C14 H14A 0.9303 ? C15 H15A 0.9308 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2A Cl2# 3_756 0.86 2.44 3.303(3) 170 yes N4 H4A Cl1# 4_555 0.86 2.59 3.294(6) 139 yes C15 H15A Cl2# ? 0.93 2.73 3.408(2) 131 yes