#------------------------------------------------------------------------------ #$Date: 2011-09-28 15:24:46 +0100 (Wed, 28 Sep 2011) $ #$Revision: 26848 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/49/2204949.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204949 loop_ _publ_author_name 'Shivachev, Boris' 'Petrova, Rosica' 'Kossev, Krassimir' 'Troev, Kolio' _publ_section_title ; [1-(Hydroxyethylamino)propyl]phosphonic acid ; _journal_issue 1 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o134 _journal_page_last o136 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C5 H14 N O4 P' _chemical_formula_moiety 'C5 H14 N O4 P' _chemical_formula_sum 'C5 H14 N O4 P' _chemical_formula_weight 183.14 _chemical_melting_point 378 _chemical_name_common ; [1-(hydroxyethylamino)propyl]phosphonic acid ; _chemical_name_systematic ; [1-(hydroxyethylammonio)propyl]phosphonate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 94.77(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.525(3) _cell_length_b 5.992(3) _cell_length_c 14.817(2) _cell_measurement_reflns_used 22 _cell_measurement_temperature 290 _cell_measurement_theta_max 21.10 _cell_measurement_theta_min 19.91 _cell_volume 842.7(5) _computing_cell_refinement 'CAD-4 EXPRESS' _computing_data_collection 'CAD-4 EXPRESS (Enraf-Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 290 _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device '\k-geometry diffractometer' _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method 'non-profiled \w/2\q' _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0211 _diffrn_reflns_av_sigmaI/netI 0.0349 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 1757 _diffrn_reflns_theta_full 25.97 _diffrn_reflns_theta_max 25.97 _diffrn_reflns_theta_min 2.15 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 120 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.297 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.444 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 392 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.330 _refine_diff_density_min -0.298 _refine_ls_extinction_coef 0.007(2) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 0.877 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 102 _refine_ls_number_reflns 1654 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.877 _refine_ls_R_factor_all 0.0622 _refine_ls_R_factor_gt 0.0421 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0699P)^2^+1.1953P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1080 _refine_ls_wR_factor_ref 0.1232 _reflns_number_gt 1305 _reflns_number_total 1654 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ob6454.cif _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_torsion_publ_flag' value 'YES' changed to 'yes' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (2 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2204949 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol C1 0.1577(3) 0.6950(5) 0.33790(18) 0.0314(6) Uani d . 1 C H1A 0.1595 0.8584 0.3363 0.038 Uiso calc R 1 H C2 0.2755(3) 0.6217(7) 0.4087(2) 0.0501(9) Uani d . 1 C H2A 0.3584 0.7109 0.4003 0.060 Uiso calc R 1 H H2B 0.2462 0.6560 0.4682 0.060 Uiso calc R 1 H C3 0.3173(4) 0.3778(7) 0.4074(3) 0.0620(11) Uani d . 1 C H3A 0.2348 0.2864 0.4090 0.093 Uiso calc R 1 H H3B 0.3814 0.3458 0.4593 0.093 Uiso calc R 1 H H3C 0.3624 0.3468 0.3532 0.093 Uiso calc R 1 H C4 0.3184(3) 0.6749(5) 0.2088(2) 0.0378(7) Uani d . 1 C H4A 0.3932 0.6577 0.2569 0.045 Uiso calc R 1 H H4B 0.3168 0.8296 0.1895 0.045 Uiso calc R 1 H C5 0.3469(3) 0.5262(6) 0.1303(2) 0.0448(8) Uani d . 1 C H5A 0.2639 0.5226 0.0877 0.054 Uiso calc R 1 H H5B 0.4236 0.5888 0.0994 0.054 Uiso calc R 1 H O4 0.3820(2) 0.3057(4) 0.15780(18) 0.0550(7) Uani d . 1 O H4C 0.3167 0.2510 0.1829 0.083 Uiso calc R 1 H N1 0.1795(2) 0.6157(4) 0.24387(14) 0.0285(5) Uani d . 1 N H1B 0.1704 0.4662 0.2426 0.034 Uiso calc R 1 H H1C 0.1102 0.6725 0.2056 0.034 Uiso calc R 1 H O1 -0.0441(2) 0.7733(3) 0.44645(12) 0.0366(5) Uani d . 1 O H1D 0.0108 0.7423 0.4902 0.055 Uiso calc R 1 H O2 -0.11980(19) 0.6732(3) 0.28695(12) 0.0305(5) Uani d . 1 O O3 -0.02139(19) 0.3719(3) 0.39345(12) 0.0307(5) Uani d . 1 O P -0.01846(7) 0.61372(11) 0.36636(4) 0.0258(2) Uani d . 1 P loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0359(14) 0.0255(13) 0.0322(14) -0.0025(11) -0.0002(11) -0.0032(11) C2 0.0387(17) 0.070(2) 0.0403(17) 0.0001(17) -0.0072(13) -0.0063(17) C3 0.0470(19) 0.083(3) 0.055(2) 0.026(2) -0.0037(16) 0.015(2) C4 0.0291(14) 0.0350(17) 0.0495(17) -0.0062(12) 0.0050(12) 0.0043(13) C5 0.0364(16) 0.053(2) 0.0458(18) -0.0055(15) 0.0113(14) 0.0049(15) O4 0.0390(12) 0.0450(14) 0.0822(18) 0.0081(11) 0.0115(12) -0.0051(13) N1 0.0268(11) 0.0247(11) 0.0340(12) -0.0008(9) 0.0017(9) 0.0023(10) O1 0.0559(13) 0.0267(10) 0.0265(10) 0.0091(9) -0.0005(9) -0.0036(8) O2 0.0346(10) 0.0278(10) 0.0283(10) 0.0020(8) -0.0015(8) 0.0017(8) O3 0.0426(11) 0.0226(10) 0.0265(9) 0.0016(8) 0.0001(8) 0.0025(8) P 0.0327(4) 0.0207(4) 0.0237(4) 0.0018(3) 0.0006(2) -0.0003(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l -1 1 -3 4 -1 -3 0 -1 -5 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N1 C1 C2 113.2(2) N1 C1 P 109.23(17) C2 C1 P 113.5(2) N1 C1 H1A 106.8 C2 C1 H1A 106.8 P C1 H1A 106.8 C3 C2 C1 116.5(3) C3 C2 H2A 108.2 C1 C2 H2A 108.2 C3 C2 H2B 108.2 C1 C2 H2B 108.2 H2A C2 H2B 107.3 C2 C3 H3A 109.5 C2 C3 H3B 109.5 H3A C3 H3B 109.5 C2 C3 H3C 109.5 H3A C3 H3C 109.5 H3B C3 H3C 109.5 N1 C4 C5 110.3(2) N1 C4 H4A 109.6 C5 C4 H4A 109.6 N1 C4 H4B 109.6 C5 C4 H4B 109.6 H4A C4 H4B 108.1 O4 C5 C4 112.5(3) O4 C5 H5A 109.1 C4 C5 H5A 109.1 O4 C5 H5B 109.1 C4 C5 H5B 109.1 H5A C5 H5B 107.8 C5 O4 H4C 109.5 C4 N1 C1 116.0(2) C4 N1 H1B 108.3 C1 N1 H1B 108.3 C4 N1 H1C 108.3 C1 N1 H1C 108.3 H1B N1 H1C 107.4 P O1 H1D 109.5 O2 P O3 114.37(11) O2 P O1 108.66(11) O3 P O1 112.34(11) O2 P C1 107.37(12) O3 P C1 110.82(12) O1 P C1 102.53(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 N1 1.503(3) ? C1 C2 1.534(4) ? C1 P 1.830(3) yes C1 H1A 0.9800 ? C2 C3 1.515(5) ? C2 H2A 0.9700 ? C2 H2B 0.9700 ? C3 H3A 0.9600 ? C3 H3B 0.9600 ? C3 H3C 0.9600 ? C4 N1 1.503(3) ? C4 C5 1.508(4) ? C4 H4A 0.9700 ? C4 H4B 0.9700 ? C5 O4 1.415(4) ? C5 H5A 0.9700 ? C5 H5B 0.9700 ? O4 H4C 0.8200 ? N1 H1B 0.9000 ? N1 H1C 0.9000 ? O1 P 1.5590(19) yes O1 H1D 0.8200 ? O2 P 1.5013(19) yes O3 P 1.5046(19) yes loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O4 H4C O2 2_545 0.82 2.02 2.807(3) 161 N1 H1B O2 2_545 0.90 1.86 2.742(3) 165 N1 H1C O3 2 0.90 2.02 2.873(3) 157 O1 H1D O3 3_566 0.82 1.85 2.555(3) 143 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 P C1 N1 -160.84(17) ? P C1 N1 C4 178.3(2) yes C1 N1 C4 C5 161.2(2) yes N1 C4 C5 O4 -72.6(3) ? O1 P C1 C2 71.8(2) ? P C1 C2 C3 77.0(3) ? O2 P C1 N1 -46.5(2) ? O3 P C1 N1 79.1(2) ? O2 P C1 C2 -173.8(2) ? O3 P C1 C2 -48.2(2) ?