#------------------------------------------------------------------------------ #$Date: 2008-04-03 11:11:48 +0100 (Thu, 03 Apr 2008) $ #$Revision: 326 $ #$URL: svn://www.crystallography.net/cod/cif/2/2204964.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204964 loop_ _publ_author_name 'Chopra, Deepak' 'Mohan, T. P.' 'Rao, K. S.' 'Guru Row, T. N.' _publ_section_title ; Diisopropyl (1,3-dithiolan-2-ylidene)malonate ; _journal_issue 1 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o3 _journal_page_last o5 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C12 H18 O4 S2' _chemical_formula_moiety 'C12 H18 O4 S2' _chemical_formula_sum 'C12 H18 O4 S2' _chemical_formula_weight 290.40 _chemical_name_common isoprothiolane _chemical_name_systematic ; diisopropyl (1,3-dithiolan-2-ylidene)malonate ; _symmetry_cell_setting Orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 10.400(7) _cell_length_b 9.117(6) _cell_length_c 32.09(2) _cell_measurement_reflns_used 675 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 24.4 _cell_measurement_theta_min 1.9 _cell_volume 3043(3) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction 'SAINT (Bruker, 2000)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997) and CAMERON (Watkin et al., 1993)' _computing_publication_material 'PLATON (Spek, 1990)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al., 1993)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0570 _diffrn_reflns_av_sigmaI/netI 0.0355 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 34 _diffrn_reflns_limit_l_min -38 _diffrn_reflns_number 20345 _diffrn_reflns_reduction_process ; ; _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.27 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.353 _exptl_absorpt_correction_T_max 0.9930 _exptl_absorpt_correction_T_min 0.9434 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.268 _exptl_crystal_density_method 'Not Measured' _exptl_crystal_description block _exptl_crystal_F_000 1232 _exptl_crystal_size_max 0.23 _exptl_crystal_size_mid 0.11 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.311 _refine_diff_density_min -0.222 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.224 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 191 _refine_ls_number_reflns 2681 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.224 _refine_ls_R_factor_all 0.1248 _refine_ls_R_factor_gt 0.0900 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0874P)^2^+1.215P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1882 _refine_ls_wR_factor_ref 0.2052 _reflns_number_gt 1925 _reflns_number_total 2681 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sj6026.cif loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,-y,1/2+z 1/2+x,1/2-y,-z -x,1/2+y,1/2-z -x,-y,-z 1/2+x,y,1/2-z 1/2-x,1/2+y,z x,1/2-y,1/2+z loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol S1 0.74652(12) 0.09080(16) 0.59790(4) 0.0777(5) Uani d . 1 S S2 0.92128(11) 0.14398(13) 0.52795(4) 0.0653(4) Uani d . 1 S O1 0.8733(5) 0.1781(6) 0.67037(13) 0.1322(19) Uani d . 1 O O2 1.1185(3) 0.3271(4) 0.55557(11) 0.0825(11) Uani d . 1 O O3 1.1891(3) 0.2926(4) 0.62048(10) 0.0712(9) Uani d . 1 O O4 0.9837(4) 0.3851(4) 0.66638(11) 0.0886(11) Uani d . 1 O C1 0.7926(5) 0.0139(6) 0.5189(2) 0.0733(14) Uani d . 1 C C2 0.6832(5) 0.0569(6) 0.54649(19) 0.0737(15) Uani d . 1 C C3 0.8923(4) 0.1680(4) 0.58113(15) 0.0572(12) Uani d . 1 C C4 0.9743(4) 0.2402(5) 0.60720(14) 0.0563(11) Uani d . 1 C C5 0.9391(5) 0.2614(6) 0.65102(16) 0.0734(14) Uani d . 1 C C6 1.0992(4) 0.2917(5) 0.59100(16) 0.0580(11) Uani d . 1 C C7 0.8881(12) 0.5431(16) 0.7129(3) 0.254(8) Uani d . 1 C C8 1.0887(11) 0.4374(17) 0.7311(3) 0.225(6) Uani d . 1 C C9 0.9611(8) 0.4148(10) 0.7112(2) 0.111(2) Uani d . 1 C C10 1.3179(5) 0.3493(7) 0.61023(19) 0.0764(15) Uani d . 1 C C11 1.3952(6) 0.2307(9) 0.5908(2) 0.121(2) Uani d . 1 C C12 1.3727(6) 0.4053(8) 0.6509(2) 0.115(2) Uani d . 1 C H1A 0.773(5) 0.014(6) 0.4896(19) 0.096(19) Uiso d . 1 H H1B 0.830(5) -0.084(6) 0.5265(15) 0.086(15) Uiso d . 1 H H2A 0.621(5) -0.014(5) 0.5489(13) 0.067(13) Uiso d . 1 H H2B 0.641(5) 0.147(5) 0.5367(14) 0.075(14) Uiso d . 1 H H7A 0.9330 0.6207 0.6989 0.381 Uiso calc R 1 H H7B 0.8743 0.5700 0.7415 0.381 Uiso calc R 1 H H7C 0.8067 0.5270 0.6996 0.381 Uiso calc R 1 H H8A 1.1280 0.5243 0.7200 0.337 Uiso calc R 1 H H8B 1.1428 0.3543 0.7256 0.337 Uiso calc R 1 H H8C 1.0777 0.4483 0.7607 0.337 Uiso calc R 1 H H9 0.941(5) 0.326(6) 0.7277(17) 0.089(18) Uiso d . 1 H H10 1.316(4) 0.434(5) 0.5952(13) 0.057(13) Uiso d . 1 H H11A 1.3983 0.1479 0.6093 0.182 Uiso calc R 1 H H11B 1.4808 0.2655 0.5857 0.182 Uiso calc R 1 H H11C 1.3563 0.2021 0.5649 0.182 Uiso calc R 1 H H12A 1.3217 0.4861 0.6607 0.173 Uiso calc R 1 H H12B 1.4596 0.4375 0.6466 0.173 Uiso calc R 1 H H12C 1.3715 0.3281 0.6712 0.173 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 0.0608(8) 0.0879(10) 0.0843(10) -0.0183(7) 0.0118(7) 0.0085(7) S2 0.0597(7) 0.0664(8) 0.0697(8) -0.0022(6) 0.0093(6) -0.0093(6) O1 0.167(4) 0.150(4) 0.079(3) -0.082(4) 0.039(3) -0.002(3) O2 0.066(2) 0.120(3) 0.062(2) -0.025(2) 0.0046(17) 0.014(2) O3 0.0538(18) 0.087(2) 0.073(2) -0.0062(16) -0.0018(16) 0.0172(18) O4 0.109(3) 0.092(3) 0.064(2) -0.021(2) 0.024(2) -0.0106(19) C1 0.067(3) 0.061(3) 0.093(4) -0.001(3) -0.003(3) -0.010(3) C2 0.054(3) 0.057(3) 0.110(4) -0.009(3) -0.004(3) 0.003(3) C3 0.051(2) 0.049(3) 0.071(3) 0.008(2) 0.009(2) 0.013(2) C4 0.053(3) 0.057(3) 0.058(3) -0.001(2) 0.004(2) 0.005(2) C5 0.065(3) 0.085(4) 0.070(3) -0.015(3) 0.006(3) 0.007(3) C6 0.055(3) 0.058(3) 0.061(3) -0.003(2) 0.003(2) 0.004(2) C7 0.286(14) 0.375(18) 0.100(6) 0.226(14) -0.019(8) -0.047(9) C8 0.191(11) 0.380(18) 0.104(7) 0.054(11) -0.029(7) -0.059(9) C9 0.127(6) 0.129(6) 0.076(5) -0.017(5) 0.019(4) -0.017(4) C10 0.057(3) 0.081(4) 0.091(4) -0.012(3) 0.000(3) 0.016(3) C11 0.064(4) 0.134(6) 0.167(7) 0.007(4) 0.010(4) -0.018(5) C12 0.097(5) 0.129(6) 0.120(6) -0.031(4) -0.024(4) 0.002(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 C2 1.494(8) y C1 H1A 0.96(6) ? C1 H1B 1.01(5) ? S1 C2 1.803(6) y S1 C3 1.756(4) y S2 C1 1.811(5) y S2 C3 1.747(5) y C3 C4 1.364(6) y C4 C5 1.466(7) y C6 C4 1.477(6) y O2 C6 1.199(5) y O3 C6 1.330(5) y C5 O1 1.196(6) y O4 C5 1.315(6) y O3 C10 1.473(6) ? O4 C9 1.481(7) ? C2 H2A 0.92(5) ? C2 H2B 0.98(5) ? C9 C7 1.396(12) ? C9 C8 1.488(12) ? C9 H9 0.99(5) ? C8 H8A 0.9600 ? C8 H8B 0.9600 ? C8 H8C 0.9600 ? C10 C11 1.484(8) ? C10 C12 1.512(8) ? C10 H10 0.91(4) ? C11 H11A 0.9600 ? C11 H11B 0.9600 ? C11 H11C 0.9600 ? C12 H12A 0.9600 ? C12 H12B 0.9600 ? C12 H12C 0.9600 ? C7 H7A 0.9600 ? C7 H7B 0.9600 ? C7 H7C 0.9600 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C3 S1 C2 96.0(2) y C3 S2 C1 96.4(3) y C4 C3 S1 123.0(4) y C4 C3 S2 123.5(3) y C3 C4 C5 119.7(4) y C3 C4 C6 119.2(4) y C5 C4 C6 121.0(4) y C6 O3 C10 118.8(4) ? O2 C6 O3 123.8(4) ? O2 C6 C4 124.5(4) ? O3 C6 C4 111.7(4) ? C2 C1 S2 107.2(4) ? C2 C1 H1A 115(3) ? S2 C1 H1A 108(3) ? C2 C1 H1B 113(3) ? S2 C1 H1B 105(3) ? H1A C1 H1B 109(4) ? S2 C3 S1 113.5(3) ? C5 O4 C9 117.7(5) ? O1 C5 O4 123.5(5) ? O1 C5 C4 123.8(5) ? O4 C5 C4 112.6(4) ? C1 C2 S1 108.0(4) ? C1 C2 H2A 114(3) ? S1 C2 H2A 107(3) ? C1 C2 H2B 112(3) ? S1 C2 H2B 108(3) ? H2A C2 H2B 107(4) ? C7 C9 O4 106.2(7) ? C7 C9 C8 110.6(10) ? O4 C9 C8 107.6(6) ? C7 C9 H9 123(3) ? O4 C9 H9 114(3) ? C8 C9 H9 94(3) ? C9 C8 H8A 109.5 ? C9 C8 H8B 109.5 ? H8A C8 H8B 109.5 ? C9 C8 H8C 109.5 ? H8A C8 H8C 109.5 ? H8B C8 H8C 109.5 ? O3 C10 C11 109.3(5) ? O3 C10 C12 105.6(5) ? C11 C10 C12 113.8(6) ? O3 C10 H10 113(3) ? C11 C10 H10 114(3) ? C12 C10 H10 100(3) ? C10 C11 H11A 109.5 ? C10 C11 H11B 109.5 ? H11A C11 H11B 109.5 ? C10 C11 H11C 109.5 ? H11A C11 H11C 109.5 ? H11B C11 H11C 109.5 ? C10 C12 H12A 109.5 ? C10 C12 H12B 109.5 ? H12A C12 H12B 109.5 ? C10 C12 H12C 109.5 ? H12A C12 H12C 109.5 ? H12B C12 H12C 109.5 ? C9 C7 H7A 109.5 ? C9 C7 H7B 109.5 ? H7A C7 H7B 109.5 ? C9 C7 H7C 109.5 ? H7A C7 H7C 109.5 ? H7B C7 H7C 109.5 ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C10 O3 C6 O2 4.3(7) C10 O3 C6 C4 -176.5(4) C3 S2 C1 C2 35.1(5) C1 S2 C3 C4 169.4(4) C1 S2 C3 S1 -10.8(3) C2 S1 C3 C4 168.1(4) C2 S1 C3 S2 -11.6(3) S2 C3 C4 C5 177.0(3) S1 C3 C4 C5 -2.7(6) S2 C3 C4 C6 -4.9(6) S1 C3 C4 C6 175.4(3) O2 C6 C4 C3 29.8(7) O3 C6 C4 C3 -149.4(4) O2 C6 C4 C5 -152.1(5) O3 C6 C4 C5 28.7(6) C9 O4 C5 O1 6.0(9) C9 O4 C5 C4 -176.4(5) C3 C4 C5 O1 30.4(8) C6 C4 C5 O1 -147.7(6) C3 C4 C5 O4 -147.1(4) C6 C4 C5 O4 34.8(6) S2 C1 C2 S1 -46.9(5) C3 S1 C2 C1 35.9(4) C5 O4 C9 C7 -119.0(9) C5 O4 C9 C8 122.6(9) C6 O3 C10 C11 -84.3(6) C6 O3 C10 C12 152.9(5) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C7 H7C O1 7_655 0.96 2.51 3.281(19) 138.0(10) yes