#------------------------------------------------------------------------------ #$Date: 2008-04-03 11:11:48 +0100 (Thu, 03 Apr 2008) $ #$Revision: 326 $ #$URL: svn://www.crystallography.net/cod/cif/2/2204982.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204982 loop_ _publ_author_name 'Calmuschi, Beatrice' 'Englert, Ulli' _publ_section_title ; (S)-[2-(1-Aminoethyl)phenyl-\k^2^C^1^,N](hexafluoroacetylacetonato- \k^2^O,O')palladium(II) ; _journal_issue 1 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m166 _journal_page_last m167 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac '[Pd (C8 H8 N) (C5 H F6 O2)]2' _chemical_formula_moiety 'C13 H9 F6 N O2 Pd' _chemical_formula_sum 'C13 H9 F6 N O2 Pd' _chemical_formula_weight 431.61 _chemical_name_systematic ; (S)-2-(1-Aminoethyl)phenyl-\k^2^C^1^,N](hexafluoroacetylacetonato- \k^2^O,O')palladium(II) ; _symmetry_cell_setting Tetragonal _symmetry_space_group_name_H-M P43 _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.951(5) _cell_length_b 10.951(5) _cell_length_c 12.442(7) _cell_measurement_reflns_used 8096 _cell_measurement_temperature 110(2) _cell_measurement_theta_max 28.41 _cell_measurement_theta_min 1.86 _cell_volume 1492.2(12) _computing_cell_refinement 'SAINT-Plus (Bruker, 1999)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT-Plus _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 110(2) _diffrn_measured_fraction_theta_full .997 _diffrn_measured_fraction_theta_max .997 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0502 _diffrn_reflns_av_sigmaI/netI 0.0410 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 15138 _diffrn_reflns_theta_full 28.41 _diffrn_reflns_theta_max 28.41 _diffrn_reflns_theta_min 1.86 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.316 _exptl_absorpt_correction_T_max 0.518 _exptl_absorpt_correction_T_min 0.426 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.921 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 840 _exptl_crystal_size_max 0.70 _exptl_crystal_size_mid 0.60 _exptl_crystal_size_min 0.50 _refine_diff_density_max 1.153 _refine_diff_density_min -0.504 _refine_ls_abs_structure_details 'Flack (1983), with how many Friedel pairs' _refine_ls_abs_structure_Flack 0.00(4) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.050 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 209 _refine_ls_number_reflns 3715 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.049 _refine_ls_R_factor_all 0.0384 _refine_ls_R_factor_gt 0.0367 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0750P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0936 _refine_ls_wR_factor_ref 0.0946 _reflns_number_gt 3547 _reflns_number_total 3715 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ww6315.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' '-y, x, z+3/4' 'y, -x, z+1/4' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F .0171 .0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Pd1 0.38165(3) 0.53417(2) 0.20135(3) 0.02251(9) Uani d . 1 Pd O1 0.4978(4) 0.3844(3) 0.2430(3) 0.0281(7) Uani d . 1 O O2 0.2339(3) 0.4214(2) 0.2028(3) 0.0316(6) Uani d . 1 O N1 0.5223(3) 0.6530(4) 0.1787(3) 0.0237(8) Uani d . 1 N F1 0.6102(4) 0.1997(3) 0.3575(3) 0.0643(11) Uani d . 1 F F2 0.6506(3) 0.1938(4) 0.1917(3) 0.0701(12) Uani d . 1 F F3 0.5226(4) 0.0686(3) 0.2583(5) 0.0925(18) Uani d . 1 F F4 0.0331(4) 0.3178(4) 0.1468(5) 0.0852(16) Uani d . 1 F F5 0.1225(4) 0.1589(5) 0.1146(5) 0.0870(18) Uani d . 1 F F6 0.0718(5) 0.2052(8) 0.2751(5) 0.133(3) Uani d . 1 F C1 0.2838(4) 0.6747(4) 0.1557(3) 0.0234(8) Uani d . 1 C C2 0.1577(4) 0.6707(4) 0.1380(4) 0.0297(9) Uani d . 1 C H2 0.1114 0.5967 0.1552 0.039 Uiso calc R 1 H C3 0.0982(4) 0.7722(4) 0.0958(4) 0.0342(10) Uani d . 1 C H3 0.0098 0.7693 0.0841 0.044 Uiso calc R 1 H C4 0.1620(5) 0.8768(4) 0.0704(4) 0.0340(10) Uani d . 1 C H4 0.1194 0.9469 0.0389 0.044 Uiso calc R 1 H C5 0.2866(5) 0.8825(4) 0.0894(3) 0.0301(9) Uani d . 1 C H5 0.3317 0.9574 0.0723 0.039 Uiso calc R 1 H C6 0.3485(4) 0.7824(4) 0.1328(3) 0.0268(8) Uani d . 1 C C7 0.4816(4) 0.7837(4) 0.1631(3) 0.0277(9) Uani d . 1 C H7 0.4891 0.8256 0.2324 0.036 Uiso calc R 1 H C8 0.5666(5) 0.8472(5) 0.0836(5) 0.0443(12) Uani d . 1 C H8A 0.6499 0.8478 0.1124 0.058 Uiso calc R 1 H H8B 0.5391 0.9314 0.0723 0.058 Uiso calc R 1 H H8C 0.5655 0.8033 0.0149 0.058 Uiso calc R 1 H C9 0.5591(5) 0.1819(4) 0.2617(4) 0.0350(10) Uani d . 1 C C10 0.4592(5) 0.2760(4) 0.2403(3) 0.0312(9) Uani d . 1 C C11 0.3424(5) 0.2328(4) 0.2212(4) 0.0343(10) Uani d . 1 C H11 0.3306 0.1442 0.2183 0.045 Uiso calc R 1 H C12 0.2410(4) 0.3067(4) 0.2059(4) 0.0308(8) Uani d . 1 C C13 0.1178(5) 0.2430(4) 0.1869(5) 0.0397(11) Uani d . 1 C loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Pd1 0.03297(17) 0.02111(14) 0.01345(13) 0.00005(11) 0.00100(12) 0.00014(12) O1 0.0436(18) 0.0212(15) 0.0195(15) 0.0038(12) -0.0100(14) -0.0013(10) O2 0.0405(15) 0.0251(13) 0.0291(13) -0.0047(11) 0.0097(16) -0.0051(16) N1 0.038(2) 0.0215(16) 0.0111(19) -0.0019(14) -0.0055(12) -0.0009(13) F1 0.107(3) 0.062(2) 0.0242(15) 0.037(2) -0.0198(17) 0.0003(15) F2 0.074(2) 0.097(3) 0.0390(19) 0.046(2) 0.0238(19) 0.025(2) F3 0.071(3) 0.0226(16) 0.184(6) 0.0100(15) -0.030(3) -0.007(2) F4 0.053(2) 0.049(2) 0.154(5) -0.0011(17) -0.019(3) -0.016(3) F5 0.052(2) 0.089(3) 0.120(4) -0.014(2) 0.016(2) -0.070(3) F6 0.093(4) 0.247(8) 0.061(3) -0.100(5) 0.005(3) 0.037(4) C1 0.032(2) 0.0259(19) 0.0125(15) 0.0016(15) 0.0051(15) -0.0010(14) C2 0.036(2) 0.031(2) 0.022(2) 0.0027(17) 0.0073(16) -0.0017(16) C3 0.033(2) 0.035(2) 0.034(2) 0.0071(18) 0.0012(19) -0.0076(19) C4 0.049(3) 0.029(2) 0.024(2) 0.0142(19) -0.001(2) 0.0014(17) C5 0.047(3) 0.025(2) 0.018(2) 0.0025(17) -0.0019(17) 0.0010(15) C6 0.039(2) 0.0240(19) 0.0173(17) 0.0003(16) -0.0026(16) -0.0048(14) C7 0.039(2) 0.024(2) 0.0203(18) -0.0028(17) -0.0075(17) 0.0010(15) C8 0.039(3) 0.044(3) 0.050(3) -0.009(2) -0.001(2) 0.019(2) C9 0.047(3) 0.034(2) 0.024(2) 0.004(2) 0.0012(19) 0.0000(18) C10 0.050(3) 0.028(2) 0.0153(17) 0.0059(19) -0.0011(17) -0.0003(16) C11 0.047(3) 0.0234(19) 0.032(3) -0.0021(17) 0.0067(19) -0.0012(17) C12 0.042(2) 0.0255(17) 0.0253(18) -0.0031(15) 0.016(2) -0.0031(19) C13 0.044(3) 0.030(2) 0.045(3) -0.0077(18) 0.011(2) -0.006(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Pd1 C1 1.959(4) yes Pd1 O2 2.035(3) yes Pd1 N1 2.035(4) yes Pd1 O1 2.139(3) yes O1 C10 1.261(6) yes O2 C12 1.259(5) yes N1 C7 1.512(6) ? F1 C9 1.331(6) ? F2 C9 1.334(6) ? F3 C9 1.304(6) ? F4 C13 1.334(7) ? F5 C13 1.288(7) ? F6 C13 1.277(7) ? C1 C2 1.399(6) ? C1 C6 1.406(6) ? C2 C3 1.390(7) ? C2 H2 0.9800 ? C3 C4 1.379(7) ? C3 H3 0.9800 ? C4 C5 1.386(7) ? C4 H4 0.9800 ? C5 C6 1.397(6) ? C5 H5 0.9800 ? C6 C7 1.506(6) ? C7 C8 1.526(7) ? C7 H7 0.9800 ? C8 H8A 0.9801 ? C8 H8B 0.9801 ? C8 H8C 0.9801 ? C9 C10 1.527(7) ? C10 C11 1.384(7) ? C11 C12 1.387(7) ? C11 H11 0.9800 ? C12 C13 1.537(7) ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 Pd1 O2 92.54(15) yes C1 Pd1 N1 82.63(17) yes O2 Pd1 N1 172.03(16) yes C1 Pd1 O1 175.99(16) yes O2 Pd1 O1 90.31(13) yes N1 Pd1 O1 94.22(17) yes C10 O1 Pd1 121.0(3) ? C12 O2 Pd1 123.8(3) ? C7 N1 Pd1 113.6(3) ? C2 C1 C6 119.4(4) ? C2 C1 Pd1 124.2(3) ? C6 C1 Pd1 116.2(3) ? C3 C2 C1 119.8(4) ? C3 C2 H2 120.1 ? C1 C2 H2 120.1 ? C4 C3 C2 120.9(5) ? C4 C3 H3 119.6 ? C2 C3 H3 119.6 ? C3 C4 C5 119.8(5) ? C3 C4 H4 120.1 ? C5 C4 H4 120.1 ? C4 C5 C6 120.5(4) ? C4 C5 H5 119.7 ? C6 C5 H5 119.7 ? C5 C6 C1 119.5(4) ? C5 C6 C7 124.0(4) ? C1 C6 C7 116.4(4) ? C6 C7 N1 108.0(3) ? C6 C7 C8 115.6(4) ? N1 C7 C8 109.6(4) ? C6 C7 H7 107.8 ? N1 C7 H7 107.8 ? C8 C7 H7 107.8 ? C7 C8 H8A 109.5 ? C7 C8 H8B 109.5 ? H8A C8 H8B 109.5 ? C7 C8 H8C 109.5 ? H8A C8 H8C 109.5 ? H8B C8 H8C 109.5 ? F3 C9 F1 107.3(5) ? F3 C9 F2 107.5(5) ? F1 C9 F2 104.7(5) ? F3 C9 C10 114.7(5) ? F1 C9 C10 111.0(4) ? F2 C9 C10 111.0(4) ? O1 C10 C11 129.5(5) ? O1 C10 C9 113.0(4) ? C11 C10 C9 117.5(4) ? C10 C11 C12 124.3(4) ? C10 C11 H11 117.8 ? C12 C11 H11 117.8 ? O2 C12 C11 129.4(4) ? O2 C12 C13 113.2(4) ? C11 C12 C13 117.3(4) ? F6 C13 F5 112.6(6) ? F6 C13 F4 104.2(6) ? F5 C13 F4 101.9(5) ? F6 C13 C12 111.2(5) ? F5 C13 C12 113.4(4) ? F4 C13 C12 112.9(4) ?