#------------------------------------------------------------------------------ #$Date: 2008-04-03 11:11:48 +0100 (Thu, 03 Apr 2008) $ #$Revision: 326 $ #$URL: svn://www.crystallography.net/cod/cif/2/2205051.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2205051 loop_ _publ_author_name 'Li, Cui-Jin' 'Li, Wei' 'Tong, Ming-Liang' 'Ng, Seik Weng' _publ_section_title ; A C-centered monoclinic modification of bis(di-2-pyridylmethanediol-\k^3^N,O,N')copper(II) diacetate tetrahydrate ; _journal_issue 2 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m232 _journal_page_last m234 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac '[Cu (C11 H10 N2 O2)2] (C2 H3 O2)2, 4H2 O' _chemical_formula_moiety 'C22 H20 Cu N4 O4, 2C2 H3 O2 -, 4H2 O' _chemical_formula_sum 'C26 H34 Cu N4 O12' _chemical_formula_weight 658.11 _chemical_name_systematic ; bis(di-2-pyridylmethanediol-\k^3^N,O,N')copper(II) diacetate tetrahydrate ; _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 2/c' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 91.9830(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 23.557(2) _cell_length_b 8.5744(6) _cell_length_c 15.8480(10) _cell_measurement_reflns_used 9126 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.0 _cell_measurement_theta_min 2.5 _cell_volume 3199.2(4) _computing_cell_refinement CrystalClear _computing_data_collection 'CrystalClear (Rigaku, 2002)' _computing_data_reduction CrystalClear _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.97 _diffrn_measured_fraction_theta_max 0.97 _diffrn_measurement_device_type 'Rigaku Mercury CCD' _diffrn_measurement_method w _diffrn_radiation_monochromator 'Graphite Monochromator' _diffrn_radiation_source 'rotating-anode generator' _diffrn_radiation_type MoKa _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.017 _diffrn_reflns_av_sigmaI/netI 0.022 _diffrn_reflns_limit_h_max 29 _diffrn_reflns_limit_h_min -30 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 9295 _diffrn_reflns_theta_full 27.5 _diffrn_reflns_theta_max 27.5 _diffrn_reflns_theta_min 2.5 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.746 _exptl_absorpt_correction_T_max 0.811 _exptl_absorpt_correction_T_min 0.772 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_process_details '(CrystalClear; Rigaku/MSC, 2002)' _exptl_crystal_colour Purple _exptl_crystal_density_diffrn 1.366 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Prism _exptl_crystal_F_000 1372 _exptl_crystal_size_max 0.36 _exptl_crystal_size_mid 0.34 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.47 _refine_diff_density_min -0.50 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.07 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 198 _refine_ls_number_reflns 3587 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.07 _refine_ls_R_factor_all 0.043 _refine_ls_R_factor_gt 0.037 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0725P)^2^+1.3743P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.114 _refine_ls_wR_factor_ref 0.119 _reflns_number_gt 3064 _reflns_number_total 3587 _reflns_threshold_expression I>2s(I) _[local]_cod_data_source_file dn6187.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu1 0.2500 0.7500 0.5000 0.03500(10) Uani d S 1 Cu O1 0.30310(10) 0.73850(10) 0.37400(10) 0.0401(3) Uani d . 1 O O2 0.31040(10) 0.5265(2) 0.28310(10) 0.0509(4) Uani d . 1 O O3 0.41170(10) 0.7548(2) 0.3886(2) 0.0714(6) Uani d . 1 O O4 0.42080(10) 0.5351(2) 0.31830(10) 0.0731(5) Uani d . 1 O O1w 0.45330(10) 1.0333(2) 0.44850(10) 0.0828(6) Uani d . 1 O O2w 0.46960(10) 1.2386(2) 0.32100(10) 0.0912(8) Uani d . 1 O N1 0.19750(10) 0.6555(2) 0.41030(10) 0.0399(4) Uani d . 1 N N2 0.29000(10) 0.5442(2) 0.50720(10) 0.0378(3) Uani d . 1 N C1 0.14050(10) 0.6602(3) 0.40970(10) 0.0510(5) Uani d . 1 C C2 0.10800(10) 0.5935(3) 0.3456(2) 0.0627(6) Uani d . 1 C C3 0.13430(10) 0.5209(3) 0.2806(2) 0.0617(6) Uani d . 1 C C4 0.19290(10) 0.5140(3) 0.28100(10) 0.0496(5) Uani d . 1 C C5 0.22310(10) 0.5829(2) 0.34670(10) 0.0387(4) Uani d . 1 C C6 0.28750(10) 0.5824(2) 0.35610(10) 0.0379(4) Uani d . 1 C C7 0.30400(10) 0.4816(2) 0.43310(10) 0.0369(4) Uani d . 1 C C8 0.33070(10) 0.3385(2) 0.4295(2) 0.0515(5) Uani d . 1 C C9 0.34390(10) 0.2610(3) 0.5041(2) 0.0656(7) Uani d . 1 C C10 0.32950(10) 0.3262(3) 0.5792(2) 0.0658(7) Uani d . 1 C C11 0.30250(10) 0.4677(3) 0.57900(10) 0.0504(5) Uani d . 1 C C12 0.44080(10) 0.6456(3) 0.3601(2) 0.0647(6) Uani d . 1 C C13 0.50400(10) 0.6478(5) 0.3797(3) 0.122(2) Uani d . 1 C H1o 0.3230 0.8018 0.3501 0.048 Uiso calc R 1 H H2o 0.3451 0.5261 0.2884 0.061 Uiso calc R 1 H H1w1 0.4387 0.9503 0.4353 0.099 Uiso d . 1 H H1w2 0.4460 1.0592 0.4964 0.099 Uiso d . 1 H H2w1 0.4480 1.3097 0.3055 0.109 Uiso d . 1 H H2w2 0.4964 1.2805 0.3466 0.109 Uiso d . 1 H H1 0.1226 0.7096 0.4537 0.061 Uiso calc R 1 H H2 0.0686 0.5976 0.3464 0.075 Uiso calc R 1 H H3 0.1128 0.4766 0.2365 0.074 Uiso calc R 1 H H4 0.2115 0.4639 0.2378 0.060 Uiso calc R 1 H H8 0.3396 0.2950 0.3779 0.062 Uiso calc R 1 H H9 0.3625 0.1653 0.5033 0.079 Uiso calc R 1 H H10 0.3379 0.2750 0.6298 0.079 Uiso calc R 1 H H11 0.2927 0.5117 0.6301 0.061 Uiso calc R 1 H H13a 0.5204 0.5508 0.3625 0.183 Uiso calc R 1 H H13b 0.5108 0.6619 0.4393 0.183 Uiso calc R 1 H H13c 0.5211 0.7321 0.3497 0.183 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0398(2) 0.0393(2) 0.0258(2) 0.00780(10) -0.00040(10) -0.00380(10) O1 0.0468(8) 0.0398(7) 0.0337(7) -0.0021(5) 0.0028(6) 0.0048(5) O2 0.0502(8) 0.0726(10) 0.0303(7) 0.0053(7) 0.0070(6) -0.0119(6) O3 0.0493(10) 0.0669(12) 0.0980(16) -0.0015(7) 0.0024(10) -0.0202(9) O4 0.0517(9) 0.0812(13) 0.0872(13) 0.0029(8) 0.0117(9) -0.0212(10) O1w 0.0945(14) 0.0654(12) 0.0882(14) 0.0032(10) -0.0007(11) -0.0099(10) O2w 0.0921(18) 0.0816(17) 0.101(2) 0.0132(10) 0.0156(15) 0.0048(11) N1 0.0398(8) 0.0463(9) 0.0335(8) 0.0062(6) -0.0009(6) -0.0043(6) N2 0.0424(8) 0.0410(8) 0.0299(7) 0.0066(6) 0.0021(6) 0.0016(6) C1 0.0423(10) 0.0614(13) 0.0490(12) 0.0101(9) 0.0000(8) -0.0061(10) C2 0.0412(11) 0.0831(17) 0.0630(14) 0.0045(11) -0.0093(10) -0.0070(13) C3 0.0569(13) 0.0753(16) 0.0515(13) -0.0014(11) -0.0172(10) -0.0130(11) C4 0.0551(12) 0.0583(13) 0.0352(10) 0.0018(9) -0.0038(8) -0.0091(9) C5 0.0421(9) 0.0440(10) 0.0298(8) 0.0043(8) -0.0004(7) -0.0007(7) C6 0.0417(9) 0.0452(10) 0.0269(8) 0.0042(7) 0.0035(7) -0.0044(7) C7 0.0371(9) 0.0385(9) 0.0350(9) 0.0017(7) 0.0033(7) -0.0020(7) C8 0.0551(12) 0.0434(11) 0.0564(13) 0.0107(9) 0.0098(10) -0.0040(9) C9 0.0699(17) 0.0475(13) 0.080(2) 0.0200(11) 0.0061(14) 0.0119(11) C10 0.0732(16) 0.0640(16) 0.0601(15) 0.0182(12) 0.0022(12) 0.0261(12) C11 0.0571(12) 0.0580(13) 0.0364(10) 0.0080(10) 0.0037(8) 0.0100(9) C12 0.0468(12) 0.0762(17) 0.0717(16) -0.0011(12) 0.0095(11) -0.0063(13) C13 0.0510(16) 0.137(4) 0.177(4) 0.0064(19) -0.002(2) -0.062(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O1 . 2.3940(10) yes Cu1 O1 7_566 2.3940(10) no Cu1 N1 . 2.021(2) yes Cu1 N1 7_566 2.021(2) no Cu1 N2 . 2.002(2) yes Cu1 N2 7_566 2.002(2) no O1 C6 . 1.414(2) no O2 C6 . 1.379(2) no O3 C12 . 1.254(3) no O4 C12 . 1.240(3) no N1 C1 . 1.343(2) no N1 C5 . 1.344(2) no N2 C11 . 1.338(2) no N2 C7 . 1.343(2) no C1 C2 . 1.376(3) no C2 C3 . 1.370(3) no C3 C4 . 1.382(3) no C4 C5 . 1.375(3) no C5 C6 . 1.518(3) no C6 C7 . 1.535(3) no C7 C8 . 1.380(3) no C8 C9 . 1.383(4) no C9 C10 . 1.368(4) no C10 C11 . 1.369(3) no C12 C13 . 1.512(4) no O1 H1o . 0.82 no O2 H2o . 0.82 no O1w H1w1 . 0.82 no O1w H1w2 . 0.82 no O2w H2w1 . 0.83 no O2w H2w2 . 0.82 no C1 H1 . 0.93 no C2 H2 . 0.93 no C3 H3 . 0.93 no C4 H4 . 0.93 no C8 H8 . 0.93 no C9 H9 . 0.93 no C10 H10 . 0.93 no C11 H11 . 0.93 no C13 H13a . 0.96 no C13 H13b . 0.96 no C13 H13c . 0.96 no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Cu1 O1 . 7_566 180 yes O1 Cu1 N1 . . 73.81(5) yes O1 Cu1 N1 . 7_566 106.19(6) yes O1 Cu1 N2 . . 75.68(5) yes O1 Cu1 N2 . 7_566 104.32(5) yes O1 Cu1 N1 7_566 . 106.19(6) no O1 Cu1 N1 7_566 7_566 73.81(5) no O1 Cu1 N2 7_566 . 104.32(5) no O1 Cu1 N2 7_566 7_566 75.68(5) no N1 Cu1 N1 . 7_566 180.0 yes N1 Cu1 N2 . . 87.84(6) yes N1 Cu1 N2 . 7_566 92.16(6) yes N1 Cu1 N2 7_566 . 92.16(6) no N1 Cu1 N2 7_566 7_566 87.84(6) no N2 Cu1 N2 . 7_566 180 yes C6 O1 Cu1 . . 93.90(10) no C1 N1 C5 . . 118.9(2) no C1 N1 Cu1 . . 125.40(10) no C5 N1 Cu1 . . 115.70(10) no C11 N2 C7 . . 119.6(2) no C11 N2 Cu1 . . 124.80(10) no C7 N2 Cu1 . . 115.60(10) no N1 C1 C2 . . 121.6(2) no C3 C2 C1 . . 119.3(2) no C2 C3 C4 . . 119.6(2) no C5 C4 C3 . . 118.4(2) no N1 C5 C4 . . 122.2(2) no N1 C5 C6 . . 113.6(2) no C4 C5 C6 . . 124.2(2) no O2 C6 O1 . . 113.0(2) no O2 C6 C5 . . 109.7(2) no O1 C6 C5 . . 105.6(2) no O2 C6 C7 . . 112.0(2) no O1 C6 C7 . . 108.40(10) no C5 C6 C7 . . 107.7(2) no N2 C7 C8 . . 121.1(2) no N2 C7 C6 . . 114.0(2) no C8 C7 C6 . . 124.9(2) no C7 C8 C9 . . 118.8(2) no C10 C9 C8 . . 119.4(2) no C9 C10 C11 . . 119.3(2) no N2 C11 C10 . . 121.7(2) no O4 C12 O3 . . 124.1(2) no O4 C12 C13 . . 118.2(3) no O3 C12 C13 . . 117.7(3) no C6 O1 H1o . . 133.1 no Cu1 O1 H1o . . 133.1 no C6 O2 H2o . . 109.5 no H1w1 O1w H1w2 . . 112.2 no H2w1 O2w H2w2 . . 106.2 no N1 C1 H1 . . 119.2 no C2 C1 H1 . . 119.2 no C3 C2 H2 . . 120.4 no C1 C2 H2 . . 120.4 no C2 C3 H3 . . 120.2 no C4 C3 H3 . . 120.2 no C5 C4 H4 . . 120.8 no C3 C4 H4 . . 120.8 no C7 C8 H8 . . 120.6 no C9 C8 H8 . . 120.6 no C10 C9 H9 . . 120.3 no C8 C9 H9 . . 120.3 no C9 C10 H10 . . 120.3 no C11 C10 H10 . . 120.3 no N2 C11 H11 . . 119.2 no C10 C11 H11 . . 119.2 no C12 C13 H13a . . 109.5 no C12 C13 H13b . . 109.5 no H13a C13 H13b . . 109.5 no C12 C13 H13c . . 109.5 no H13a C13 H13c . . 109.5 no H13b C13 H13c . . 109.5 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion _geom_torsion_publ_flag N2 Cu1 O1 C6 . 44.70(10) no N2 Cu1 O1 C6 7_566 -135.30(10) no N1 Cu1 O1 C6 . -47.20(10) no N1 Cu1 O1 C6 7_566 132.80(10) no N2 Cu1 N1 C1 . 129.4(2) no N2 Cu1 N1 C1 7_566 -50.6(2) no O1 Cu1 N1 C1 . -154.9(2) no O1 Cu1 N1 C1 7_566 25.1(2) no N2 Cu1 N1 C5 . -50.60(10) no N2 Cu1 N1 C5 7_566 129.40(10) no O1 Cu1 N1 C5 . 25.10(10) no O1 Cu1 N1 C5 7_566 -154.90(10) no N1 Cu1 N2 C11 . -130.7(2) no N1 Cu1 N2 C11 7_566 49.3(2) no O1 Cu1 N2 C11 . 155.5(2) no O1 Cu1 N2 C11 7_566 -24.5(2) no N1 Cu1 N2 C7 . 48.60(10) no N1 Cu1 N2 C7 7_566 -131.40(10) no O1 Cu1 N2 C7 . -25.30(10) no O1 Cu1 N2 C7 7_566 154.70(10) no C5 N1 C1 C2 . -0.4(3) no Cu1 N1 C1 C2 . 179.6(2) no N1 C1 C2 C3 . -0.2(4) no C1 C2 C3 C4 . 0.9(4) no C2 C3 C4 C5 . -0.9(4) no C1 N1 C5 C4 . 0.3(3) no Cu1 N1 C5 C4 . -179.6(2) no C1 N1 C5 C6 . -178.5(2) no Cu1 N1 C5 C6 . 1.5(2) no C3 C4 C5 N1 . 0.3(3) no C3 C4 C5 C6 . 179.1(2) no Cu1 O1 C6 O2 . 179.60(10) no Cu1 O1 C6 C5 . 59.70(10) no Cu1 O1 C6 C7 . -55.60(10) no N1 C5 C6 O2 . -171.3(2) no C4 C5 C6 O2 . 9.8(3) no N1 C5 C6 O1 . -49.2(2) no C4 C5 C6 O1 . 131.9(2) no N1 C5 C6 C7 . 66.5(2) no C4 C5 C6 C7 . -112.4(2) no C11 N2 C7 C8 . 0.7(3) no Cu1 N2 C7 C8 . -178.6(2) no C11 N2 C7 C6 . -179.6(2) no Cu1 N2 C7 C6 . 1.1(2) no O2 C6 C7 N2 . 170.4(2) no O1 C6 C7 N2 . 45.0(2) no C5 C6 C7 N2 . -68.8(2) no O2 C6 C7 C8 . -9.9(3) no O1 C6 C7 C8 . -135.3(2) no C5 C6 C7 C8 . 110.9(2) no N2 C7 C8 C9 . -1.2(3) no C6 C7 C8 C9 . 179.1(2) no C7 C8 C9 C10 . 1.1(4) no C8 C9 C10 C11 . -0.5(4) no C7 N2 C11 C10 . 0.1(3) no Cu1 N2 C11 C10 . 179.3(2) no C9 C10 C11 N2 . -0.1(4) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O1 H1o O3 . 0.82 2.19 2.564(2) 108 yes O2 H2o O4 . 0.82 1.83 2.643(2) 171 yes O1w H1w1 O3 . 0.82 1.93 2.738(3) 171 yes O2w H2w1 O4 1_565 0.83 2.05 2.790(3) 149 yes