#------------------------------------------------------------------------------ #$Date: 2025-08-19 11:43:10 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301803 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/51/2205155.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2205155 loop_ _publ_author_name 'Moghimi, Abolghasem' 'Aghabozorg, Hossein' 'Soleimannejad, Janet' 'Ramezanipour, Farshid' _publ_section_title ; Guanidinium 4-hydroxypyridinium-2,6-dicarboxylate ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o442 _journal_page_last o444 _journal_paper_doi 10.1107/S1600536805001121 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C1 H6 N3 +, C7 H4 N1 O5 -' _chemical_formula_moiety 'C1 H6 N3 +, C7 H4 N1 O5 -' _chemical_formula_sum 'C8 H10 N4 O5' _chemical_formula_weight 242.20 _chemical_name_systematic ; Guanidinium 4-hydroxypyridinium-2,6-dicarboxylate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 6.824(3) _cell_length_b 11.887(6) _cell_length_c 25.224(10) _cell_measurement_reflns_used 2575 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 17.32 _cell_measurement_theta_min 3.235 _cell_volume 2046.1(16) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction 'SAINT-Plus (Bruker, 1998)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1998)' _diffrn_ambient_temperature 120(2) _diffrn_measured_fraction_theta_full 0.974 _diffrn_measured_fraction_theta_max 0.974 _diffrn_measurement_device_type 'Bruker SMART 1000 CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0369 _diffrn_reflns_av_sigmaI/netI 0.0391 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -4 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 22 _diffrn_reflns_limit_l_min -33 _diffrn_reflns_number 8560 _diffrn_reflns_theta_full 28.00 _diffrn_reflns_theta_max 28.00 _diffrn_reflns_theta_min 1.61 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.133 _exptl_absorpt_correction_T_max 0.954 _exptl_absorpt_correction_T_min 0.874 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1998a)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.572 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 1008 _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.298 _refine_diff_density_min -0.276 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.030 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 162 _refine_ls_number_reflns 2395 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.030 _refine_ls_R_factor_all 0.0814 _refine_ls_R_factor_gt 0.0562 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.05P)^2^+2.2P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1247 _refine_ls_wR_factor_ref 0.1333 _reflns_number_gt 1568 _reflns_number_total 2395 _reflns_threshold_expression I>2\s(I) _cod_data_source_file su6151.cif _cod_data_source_block I _cod_database_code 2205155 _cod_database_fobs_code 2205155 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,-y,1/2+z 1/2+x,1/2-y,-z -x,1/2+y,1/2-z -x,-y,-z 1/2+x,y,1/2-z 1/2-x,1/2+y,z x,1/2-y,1/2+z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0457(10) 0.0214(8) 0.0221(9) -0.0075(7) 0.0000(7) 0.0021(6) O2 0.0364(9) 0.0232(8) 0.0193(9) 0.0005(7) 0.0008(7) 0.0018(6) O3 0.0394(9) 0.0193(8) 0.0255(9) -0.0034(7) 0.0018(7) 0.0003(7) O4 0.0406(10) 0.0298(9) 0.0202(9) -0.0005(7) 0.0011(7) 0.0011(7) O5 0.0330(9) 0.0223(8) 0.0235(9) -0.0012(7) 0.0017(7) -0.0038(6) N1 0.0286(10) 0.0193(9) 0.0200(10) -0.0009(7) 0.0009(8) -0.0020(7) C1 0.0271(11) 0.0221(10) 0.0166(11) 0.0038(9) 0.0014(9) 0.0006(9) C2 0.0279(12) 0.0237(11) 0.0166(11) 0.0018(9) -0.0007(9) 0.0002(9) C3 0.0291(12) 0.0191(10) 0.0248(13) 0.0005(9) -0.0004(9) 0.0004(9) C4 0.0281(12) 0.0225(10) 0.0199(12) 0.0008(9) 0.0009(9) 0.0029(9) C5 0.0241(11) 0.0220(10) 0.0187(11) 0.0034(8) 0.0015(9) 0.0016(9) C6 0.0253(11) 0.0197(10) 0.0200(12) 0.0021(8) -0.0013(9) 0.0018(9) C7 0.0258(11) 0.0232(10) 0.0204(12) 0.0040(9) -0.0015(9) -0.0004(9) N1C 0.0405(12) 0.0183(9) 0.0208(10) -0.0008(8) 0.0019(9) 0.0001(8) N2C 0.0355(11) 0.0217(9) 0.0210(11) -0.0023(8) 0.0022(8) -0.0020(8) N3C 0.0349(11) 0.0232(9) 0.0199(10) -0.0011(8) 0.0012(8) -0.0014(8) C1C 0.0264(11) 0.0229(10) 0.0199(11) 0.0024(9) -0.0009(9) 0.0009(9) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.6364(3) 0.87413(13) 0.34855(6) 0.0297(5) Uani . . 1.000 O O2 0.3461(2) 0.57734(13) 0.47293(6) 0.0263(5) Uani . . 1.000 O O3 0.3277(2) 0.43018(12) 0.41672(6) 0.0281(5) Uani . . 1.000 O O4 0.4633(3) 0.61156(14) 0.19497(6) 0.0302(5) Uani . . 1.000 O O5 0.3170(2) 0.46897(13) 0.23867(6) 0.0263(5) Uani . . 1.000 O N1 0.3962(3) 0.56317(15) 0.33297(7) 0.0226(6) Uani . . 1.000 N C1 0.4214(3) 0.60700(18) 0.38211(8) 0.0219(6) Uani . . 1.000 C C2 0.4992(3) 0.71278(18) 0.38733(9) 0.0227(7) Uani . . 1.000 C C3 0.5526(3) 0.77537(18) 0.34244(9) 0.0243(7) Uani . . 1.000 C C4 0.5174(3) 0.72749(18) 0.29203(9) 0.0235(7) Uani . . 1.000 C C5 0.4396(3) 0.62141(18) 0.28828(8) 0.0216(6) Uani . . 1.000 C C6 0.3609(3) 0.53150(18) 0.42837(8) 0.0217(6) Uani . . 1.000 C C7 0.4048(3) 0.56330(18) 0.23573(9) 0.0231(6) Uani . . 1.000 C N1C 0.1535(3) 0.30907(15) 0.50548(7) 0.0265(6) Uani . . 1.000 N N2C 0.1522(3) 0.46473(15) 0.55951(8) 0.0261(6) Uani . . 1.000 N N3C 0.0296(3) 0.29540(16) 0.59074(7) 0.0260(6) Uani . . 1.000 N C1C 0.1114(3) 0.35587(18) 0.55223(9) 0.0231(6) Uani . . 1.000 C H1A 0.34280 0.49010 0.32900 0.028(6) Uiso . R 1.000 H H1O 0.66340 0.90850 0.31250 0.095(14) Uiso . R 1.000 H H2 0.51670 0.74330 0.42090 0.0270 Uiso calc R 1.000 H H4 0.54700 0.76780 0.26150 0.0280 Uiso calc R 1.000 H H1CB 0.20230 0.35010 0.47870 0.027(7) Uiso . R 1.000 H H1CA 0.15210 0.22750 0.50180 0.033(7) Uiso . R 1.000 H H2CA 0.20680 0.50310 0.53330 0.045(8) Uiso . R 1.000 H H2CB 0.12350 0.49530 0.58900 0.036(8) Uiso . R 1.000 H H3CA 0.01640 0.32710 0.62300 0.043(8) Uiso . R 1.000 H H3CB -0.00320 0.22670 0.58410 0.028(7) Uiso . R 1.000 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C3 O1 H1O 109.00 no C1 N1 C5 122.44(18) yes C1 N1 H1A 120.00 no C5 N1 H1A 118.00 no H1CB N1C H1CA 118.00 no C1C N1C H1CB 121.00 no C1C N1C H1CA 120.00 no H2CA N2C H2CB 122.00 no C1C N2C H2CB 119.00 no C1C N2C H2CA 119.00 no H3CA N3C H3CB 123.00 no C1C N3C H3CA 118.00 no C1C N3C H3CB 119.00 no N1 C1 C2 119.30(19) yes C2 C1 C6 124.72(19) no N1 C1 C6 115.98(18) yes C1 C2 C3 120.6(2) no C2 C3 C4 117.92(19) no O1 C3 C4 122.6(2) yes O1 C3 C2 119.5(2) yes C3 C4 C5 119.9(2) no N1 C5 C7 117.45(18) yes N1 C5 C4 119.79(19) yes C4 C5 C7 122.74(19) no O2 C6 O3 127.6(2) yes O3 C6 C1 115.57(18) yes O2 C6 C1 116.81(18) yes O4 C7 C5 117.60(19) yes O5 C7 C5 115.13(19) yes O4 C7 O5 127.3(2) yes C1 C2 H2 120.00 no C3 C2 H2 120.00 no C5 C4 H4 120.00 no C3 C4 H4 120.00 no N2C C1C N3C 120.7(2) yes N1C C1C N2C 118.7(2) yes N1C C1C N3C 120.65(19) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C3 1.315(3) yes O2 C6 1.253(3) yes O3 C6 1.260(3) yes O4 C7 1.243(3) yes O5 C7 1.274(3) yes O1 H1O 1.0100 no N1 C1 1.356(3) yes N1 C5 1.356(3) yes N1 H1A 0.9500 no N1C C1C 1.335(3) yes N2C C1C 1.336(3) yes N3C C1C 1.331(3) yes N1C H1CA 0.9700 no N1C H1CB 0.9000 no N2C H2CA 0.8900 no N2C H2CB 0.8500 no N3C H3CA 0.9000 no N3C H3CB 0.8600 no C1 C6 1.529(3) no C1 C2 1.371(3) no C2 C3 1.403(3) no C3 C4 1.414(3) no C4 C5 1.371(3) no C5 C7 1.514(3) no C2 H2 0.9300 no C4 H4 0.9300 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O1 H1O O4 4_655 1.01 2.57 3.104(3) 113 n O1 H1O O5 4_655 1.01 1.48 2.492(2) 173 yes N1 H1A O3 . 0.95 2.33 2.680(3) 101 n N1 H1A O5 . 0.95 2.30 2.684(3) 104 n N1C H1CB O3 . 0.90 2.02 2.915(3) 175 yes N1C H1CA O2 7_545 0.97 1.93 2.874(3) 163 yes N2C H2CA O2 . 0.89 2.00 2.883(3) 175 yes N2C H2CB O1 3_466 0.85 2.21 3.010(3) 156 yes N3C H3CA O4 2_565 0.90 1.96 2.853(3) 170 yes N3C H3CB O3 3_456 0.86 2.19 3.021(3) 161 yes C2 H2 N1C 7_555 0.93 2.55 3.358(3) 145 n C4 H4 O5 4_655 0.93 2.57 3.181(3) 124 n loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C5 N1 C1 C6 178.60(19) no C5 N1 C1 C2 -2.1(3) no C1 N1 C5 C4 2.0(3) no C1 N1 C5 C7 -179.9(2) no C6 C1 C2 C3 179.23(19) no N1 C1 C6 O2 -166.30(19) no N1 C1 C6 O3 12.3(3) no C2 C1 C6 O2 14.4(3) no C2 C1 C6 O3 -167.0(2) no N1 C1 C2 C3 -0.1(3) no C1 C2 C3 C4 2.1(3) no C1 C2 C3 O1 -176.4(2) no C2 C3 C4 C5 -2.2(3) no O1 C3 C4 C5 176.3(2) no C3 C4 C5 N1 0.2(3) no C3 C4 C5 C7 -177.76(19) no N1 C5 C7 O5 7.5(3) no C4 C5 C7 O5 -174.49(19) no C4 C5 C7 O4 5.4(3) no N1 C5 C7 O4 -172.6(2) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 30654780 2 PubChem 139067452