#------------------------------------------------------------------------------ #$Date: 2011-09-17 21:27:16 +0100 (Sat, 17 Sep 2011) $ #$Revision: 26029 $ #$URL: svn://www.crystallography.net/cod/cif/2/2206704.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206704 loop_ _publ_author_name 'Yang, Yu-Min' 'Li, Huan-Qiu' 'Shi, Lei' 'Zhu, Hai-Liang' _publ_section_title ; Iodometronidazole ; _journal_coeditor_code HG6215 _journal_issue 9 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o2882 _journal_page_last o2883 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C6 H8 I N3 O2' _chemical_formula_moiety 'C6 H8 I N3 O2' _chemical_formula_sum 'C6 H8 I N3 O2' _chemical_formula_weight 281.05 _chemical_name_common Iodometronidazole _chemical_name_systematic ; 1-(2-iodoethyl)-2-methyl-5-nitro-1H-imidazole ; _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 89.073(6) _cell_angle_beta 86.903(6) _cell_angle_gamma 73.097(6) _cell_formula_units_Z 2 _cell_length_a 6.192(3) _cell_length_b 7.740(3) _cell_length_c 10.001(4) _cell_measurement_reflns_used 1310 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 25.8 _cell_measurement_theta_min 6.1 _cell_volume 457.9(3) _computing_cell_refinement SMART _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction 'SAINT (Siemens, 1996)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997a)' _diffrn_ambient_temperature 298(2) _diffrn_measured_fraction_theta_full 0.958 _diffrn_measured_fraction_theta_max 0.958 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0114 _diffrn_reflns_av_sigmaI/netI 0.0259 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 2006 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 2.04 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 3.463 _exptl_absorpt_correction_T_max 0.298 _exptl_absorpt_correction_T_min 0.265 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour 'pale yellow' _exptl_crystal_density_diffrn 2.039 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 268 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.35 _refine_diff_density_max 0.936 _refine_diff_density_min -0.879 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.060 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 110 _refine_ls_number_reflns 1553 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.060 _refine_ls_R_factor_all 0.0423 _refine_ls_R_factor_gt 0.0391 _refine_ls_shift/su_max 0.004 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0484P)^2^+1.1805P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0996 _refine_ls_wR_factor_ref 0.1043 _reflns_number_gt 1410 _reflns_number_total 1553 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file hg6215.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol I1 0.35079(7) 0.78709(6) 0.48668(4) 0.0764(2) Uani d . 1 I C1 -0.2485(9) 0.7410(7) 0.1442(5) 0.0493(12) Uani d . 1 C O1 0.0792(9) 0.1550(6) 0.1691(6) 0.0806(13) Uani d . 1 O N2 -0.3651(7) 0.6482(7) 0.0827(5) 0.0559(11) Uani d . 1 N N1 -0.0618(8) 0.6305(6) 0.1987(5) 0.0531(11) Uani d . 1 N O2 0.2355(10) 0.3092(7) 0.2881(6) 0.103(2) Uani d . 1 O C2 -0.2521(9) 0.4735(8) 0.1011(5) 0.0525(13) Uani d . 1 C H4 -0.2948 0.3769 0.0688 0.063 Uiso calc R 1 H N3 0.0929(9) 0.2976(6) 0.2133(5) 0.0616(12) Uani d . 1 N C3 -0.0688(9) 0.4570(7) 0.1727(5) 0.0492(12) Uani d . 1 C C4 -0.3122(12) 0.9402(8) 0.1500(7) 0.0704(17) Uani d . 1 C H1A -0.2274 0.9841 0.0813 0.106 Uiso calc R 1 H H1B -0.2799 0.9771 0.2361 0.106 Uiso calc R 1 H H1C -0.4708 0.9888 0.1366 0.106 Uiso calc R 1 H C5 0.1260(11) 0.6920(9) 0.2550(6) 0.0648(15) Uani d . 1 C H11A 0.2720 0.6076 0.2306 0.078 Uiso calc R 1 H H11B 0.1235 0.8102 0.2202 0.078 Uiso calc R 1 H C6 0.0857(13) 0.6992(11) 0.4026(7) 0.0770(18) Uani d . 1 C H10A 0.0879 0.5809 0.4371 0.092 Uiso calc R 1 H H10B -0.0608 0.7832 0.4266 0.092 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 I1 0.0749(3) 0.0771(4) 0.0824(4) -0.0232(2) -0.0375(2) -0.0180(2) C1 0.051(3) 0.045(3) 0.052(3) -0.010(2) -0.014(2) -0.006(2) O1 0.091(3) 0.045(2) 0.108(4) -0.020(2) -0.018(3) -0.007(2) N2 0.047(2) 0.060(3) 0.064(3) -0.019(2) -0.018(2) -0.013(2) N1 0.055(2) 0.045(2) 0.063(3) -0.015(2) -0.024(2) -0.007(2) O2 0.114(4) 0.060(3) 0.127(5) 0.000(3) -0.078(4) -0.010(3) C2 0.050(3) 0.059(3) 0.056(3) -0.027(3) -0.008(2) -0.010(2) N3 0.068(3) 0.044(3) 0.072(3) -0.013(2) -0.017(3) -0.004(2) C3 0.053(3) 0.045(3) 0.052(3) -0.015(2) -0.010(2) -0.006(2) C4 0.078(4) 0.048(3) 0.082(4) -0.008(3) -0.030(3) -0.010(3) C5 0.066(4) 0.064(4) 0.065(4) -0.019(3) -0.004(3) -0.003(3) C6 0.083(4) 0.084(5) 0.069(4) -0.033(4) 0.005(3) -0.014(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance I1 C6 2.163(7) C1 N2 1.334(7) C1 N1 1.358(7) C1 C4 1.477(8) O1 N3 1.223(6) N2 C2 1.345(7) N1 C3 1.385(7) N1 C5 1.516(8) O2 N3 1.210(7) C2 C3 1.348(8) C2 H4 0.9300 N3 C3 1.414(7) C4 H1A 0.9600 C4 H1B 0.9600 C4 H1C 0.9600 C5 C6 1.484(9) C5 H11A 0.9700 C5 H11B 0.9700 C6 H10A 0.9700 C6 H10B 0.9700 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N2 C1 N1 111.8(5) N2 C1 C4 124.1(5) N1 C1 C4 124.0(5) C1 N2 C2 105.3(4) C1 N1 C3 105.1(4) C1 N1 C5 125.0(5) C3 N1 C5 129.3(5) N2 C2 C3 110.9(5) N2 C2 H4 124.5 C3 C2 H4 124.5 O2 N3 O1 124.0(5) O2 N3 C3 119.1(5) O1 N3 C3 116.9(5) C2 C3 N1 106.8(5) C2 C3 N3 128.6(5) N1 C3 N3 124.6(5) C1 C4 H1A 109.5 C1 C4 H1B 109.5 H1A C4 H1B 109.5 C1 C4 H1C 109.5 H1A C4 H1C 109.5 H1B C4 H1C 109.5 C6 C5 N1 106.8(5) C6 C5 H11A 110.4 N1 C5 H11A 110.4 C6 C5 H11B 110.4 N1 C5 H11B 110.4 H11A C5 H11B 108.6 C5 C6 I1 107.8(5) C5 C6 H10A 110.1 I1 C6 H10A 110.1 C5 C6 H10B 110.1 I1 C6 H10B 110.1 H10A C6 H10B 108.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion N1 C1 N2 C2 1.4(6) C4 C1 N2 C2 -179.8(6) N2 C1 N1 C3 -2.2(6) C4 C1 N1 C3 179.0(6) N2 C1 N1 C5 169.4(5) C4 C1 N1 C5 -9.5(9) C1 N2 C2 C3 0.1(6) N2 C2 C3 N1 -1.4(6) N2 C2 C3 N3 179.9(5) C1 N1 C3 C2 2.1(6) C5 N1 C3 C2 -168.9(5) C1 N1 C3 N3 -179.2(5) C5 N1 C3 N3 9.8(9) O2 N3 C3 C2 -173.2(7) O1 N3 C3 C2 7.1(9) O2 N3 C3 N1 8.3(9) O1 N3 C3 N1 -171.4(6) C1 N1 C5 C6 100.2(7) C3 N1 C5 C6 -90.3(7) N1 C5 C6 I1 -179.9(4) _cod_database_code 2206704