#------------------------------------------------------------------------------ #$Date: 2011-09-17 21:27:16 +0100 (Sat, 17 Sep 2011) $ #$Revision: 26029 $ #$URL: svn://www.crystallography.net/cod/cif/2/2206769.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206769 _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _[local]_cod_cif_authors_sg_H-M 'P 21/n' loop_ _publ_author_name 'Liu, Ying' 'Dou, Jianmin' 'Wang, Daqi' 'Li, Dacheng' _publ_section_title ; Poly[diaquabis(\m~3~-malonato)(\m-pyrazine)dinickel(II)] ; _journal_coeditor_code OB6558 _journal_issue 9 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m1834 _journal_page_last m1836 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac '[Ni2 (C3 H2 O4)2 (C4 H4 N2) (H2 O)2]' _chemical_formula_moiety 'C10 H12 N2 Ni2 O10' _chemical_formula_sum 'C10 H12 N2 Ni2 O10' _chemical_formula_weight 437.6 _chemical_name_systematic ; Poly[diaquabis(\m~3~-malonato)(\m-pyrazine)dinickel(II)] ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 92.181(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 6.9783(5) _cell_length_b 14.5612(9) _cell_length_c 7.3348(5) _cell_measurement_reflns_used 1338 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25.16 _cell_measurement_theta_min 1.71 _cell_volume 744.77(9) _computing_cell_refinement SMART _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction 'SAINT (Siemens, 1996)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997a)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.988 _diffrn_measured_fraction_theta_max 0.988 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0226 _diffrn_reflns_av_sigmaI/netI 0.0375 _diffrn_reflns_limit_h_max 3 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 8 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 2429 _diffrn_reflns_theta_full 25.16 _diffrn_reflns_theta_max 25.16 _diffrn_reflns_theta_min 2.80 _exptl_absorpt_coefficient_mu 2.585 _exptl_absorpt_correction_T_max 0.426 _exptl_absorpt_correction_T_min 0.375 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour green _exptl_crystal_density_diffrn 1.951 _exptl_crystal_density_method 'not measured' _exptl_crystal_description column _exptl_crystal_F_000 444 _exptl_crystal_size_max 0.42 _exptl_crystal_size_mid 0.37 _exptl_crystal_size_min 0.33 _refine_diff_density_max 0.602 _refine_diff_density_min -0.396 _refine_ls_extinction_coef 0.018(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997a)' _refine_ls_goodness_of_fit_ref 1.002 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 123 _refine_ls_number_reflns 1338 _refine_ls_number_restraints 9 _refine_ls_restrained_S_all 1.004 _refine_ls_R_factor_all 0.0391 _refine_ls_R_factor_gt 0.0329 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.008 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0643P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0856 _refine_ls_wR_factor_ref 0.0893 _reflns_number_gt 1118 _reflns_number_total 1338 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ob6558.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Ni1 0.66238(5) 0.69131(3) -0.08101(5) 0.0187(2) Uani d D 1 Ni C1 0.4150(5) 0.6682(2) 0.2436(4) 0.0262(7) Uani d . 1 C C2 0.3873(6) 0.6085(3) 0.4106(5) 0.0337(8) Uani d D 1 C C3 0.9173(5) 0.8403(2) 0.0878(4) 0.0260(7) Uani d . 1 C C4 1.0475(5) 0.5745(3) -0.0907(6) 0.0415(10) Uani d D 1 C C5 0.8212(5) 0.4954(3) 0.0546(5) 0.0382(9) Uani d D 1 C N1 0.8671(4) 0.57184(19) -0.0373(4) 0.0293(6) Uani d . 1 N O1 0.5251(3) 0.62248(17) -0.2949(3) 0.0330(6) Uani d . 1 O O2 0.8363(3) 0.75257(17) -0.2697(3) 0.0328(6) Uani d . 1 O O3 0.4672(4) 0.81041(18) -0.0870(3) 0.0371(6) Uani d D 1 O O4 0.8300(3) 0.7640(2) 0.1097(3) 0.0362(6) Uani d . 1 O O5 0.5142(3) 0.63277(17) 0.1252(3) 0.0334(6) Uani d . 1 O H1 1.074(6) 0.622(2) -0.156(5) 0.059(13) Uiso d D 1 H H2 0.703(3) 0.495(3) 0.096(4) 0.039(10) Uiso d D 1 H H3 0.465(4) 0.5595(19) 0.408(5) 0.042(11) Uiso d D 1 H H4 0.271(3) 0.584(3) 0.407(7) 0.070(16) Uiso d D 1 H H5 0.388(5) 0.797(3) -0.004(5) 0.055(14) Uiso d D 1 H H6 0.409(8) 0.802(5) -0.190(4) 0.059(13) Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 0.0229(3) 0.0177(3) 0.0157(3) -0.00064(15) 0.00199(16) 0.00056(15) C1 0.0295(16) 0.0246(19) 0.0246(16) -0.0007(14) 0.0019(13) -0.0041(14) C2 0.053(2) 0.024(2) 0.0239(17) 0.0054(18) 0.0030(15) 0.0010(15) C3 0.0305(16) 0.0230(19) 0.0247(16) -0.0020(15) 0.0032(13) -0.0051(14) C4 0.038(2) 0.034(2) 0.054(2) 0.0056(17) 0.0166(17) 0.0159(19) C5 0.0317(18) 0.029(2) 0.055(2) 0.0014(16) 0.0129(17) 0.0089(18) N1 0.0305(14) 0.0263(16) 0.0312(15) 0.0016(12) 0.0016(11) 0.0009(13) O1 0.0423(13) 0.0255(13) 0.0306(12) 0.0016(11) -0.0055(10) 0.0028(11) O2 0.0448(14) 0.0288(15) 0.0256(12) -0.0079(11) 0.0105(10) -0.0027(10) O3 0.0398(14) 0.0416(17) 0.0303(14) 0.0022(11) 0.0046(11) 0.0016(11) O4 0.0469(15) 0.0352(16) 0.0261(12) -0.0122(12) -0.0048(10) 0.0040(11) O5 0.0395(12) 0.0294(14) 0.0324(13) 0.0033(11) 0.0149(10) -0.0003(11) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Ni1 O5 . 2.050(2) yes Ni1 O1 . 2.066(2) yes Ni1 O2 . 2.076(2) yes Ni1 O4 . 2.079(2) yes Ni1 O3 . 2.205(3) yes Ni1 N1 . 2.266(3) yes Ni1 H6 . 2.50(5) ? C1 O5 . 1.243(4) ? C1 O2 4_576 1.280(4) ? C1 C2 . 1.520(5) ? C2 C3 4_576 1.506(5) ? C2 H3 . 0.896(18) ? C2 H4 . 0.886(19) ? C3 O1 4_676 1.245(4) ? C3 O4 . 1.280(5) ? C3 C2 4_675 1.506(5) ? C4 N1 . 1.334(4) ? C4 C5 3_765 1.388(5) ? C4 H1 . 0.87(2) ? C5 N1 . 1.346(5) ? C5 C4 3_765 1.388(5) ? C5 H2 . 0.890(19) ? O1 C3 4_575 1.245(4) ? O2 C1 4_675 1.280(4) ? O3 H6 . 0.85(2) ? O3 H5 . 0.86(2) ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O5 Ni1 O1 . . 97.24(10) yes O5 Ni1 O2 . . 173.93(9) yes O1 Ni1 O2 . . 88.19(10) yes O5 Ni1 O4 . . 90.12(10) yes O1 Ni1 O4 . . 172.21(9) yes O2 Ni1 O4 . . 84.35(9) yes O5 Ni1 O3 . . 90.76(9) yes O1 Ni1 O3 . . 95.62(10) yes O2 Ni1 O3 . . 91.43(10) yes O4 Ni1 O3 . . 86.81(11) yes O5 Ni1 N1 . . 84.79(9) yes O1 Ni1 N1 . . 90.39(9) yes O2 Ni1 N1 . . 92.46(10) yes O4 Ni1 N1 . . 87.72(10) yes O3 Ni1 N1 . . 172.94(10) yes O5 Ni1 H6 . . 97.6(16) ? O1 Ni1 H6 . . 76.6(11) ? O2 Ni1 H6 . . 86.3(17) ? O4 Ni1 H6 . . 105.0(13) ? O3 Ni1 H6 . . 19.6(9) ? N1 Ni1 H6 . . 167.0(11) ? O5 C1 O2 . 4_576 124.7(3) ? O5 C1 C2 . . 114.7(3) ? O2 C1 C2 4_576 . 120.6(3) ? C3 C2 C1 4_576 . 113.3(3) ? C3 C2 H3 4_576 . 110(2) ? C1 C2 H3 . . 110(2) ? C3 C2 H4 4_576 . 109(3) ? C1 C2 H4 . . 110(3) ? H3 C2 H4 . . 104(2) ? O1 C3 O4 4_676 . 124.6(3) ? O1 C3 C2 4_676 4_675 116.2(3) ? O4 C3 C2 . 4_675 119.1(3) ? N1 C4 C5 . 3_765 123.1(3) ? N1 C4 H1 . . 114(3) ? C5 C4 H1 3_765 . 123(3) ? N1 C5 C4 . 3_765 122.3(3) ? N1 C5 H2 . . 115(3) ? C4 C5 H2 3_765 . 123(3) ? C4 N1 C5 . . 114.6(3) ? C4 N1 Ni1 . . 122.2(2) ? C5 N1 Ni1 . . 123.1(2) ? C3 O1 Ni1 4_575 . 124.3(2) ? C1 O2 Ni1 4_675 . 126.6(2) ? Ni1 O3 H6 . . 100(4) ? Ni1 O3 H5 . . 103(3) ? H6 O3 H5 . . 107(4) ? C3 O4 Ni1 . . 128.0(2) ? C1 O5 Ni1 . . 130.8(2) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H5 O2 4_576 0.86(2) 1.91(4) 2.693(3) 151(4) yes O3 H6 O4 4_575 0.85(2) 1.82(5) 2.623(3) 155(7) yes _cod_database_code 2206769