#------------------------------------------------------------------------------ #$Date: 2008-04-03 11:11:48 +0100 (Thu, 03 Apr 2008) $ #$Revision: 326 $ #$URL: svn://www.crystallography.net/cod/cif/2/2206781.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206781 loop_ _publ_author_name 'Tong, Yi-Ping' _publ_section_title ; 1-Benzyl-2-[2-(benzyloxy)phenyl]-1H-benzimidazole ; _journal_coeditor_code RN6057 _journal_issue 9 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o2978 _journal_page_last o2980 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C27 H22 N2 O' _chemical_formula_moiety 'C27 H22 N2 O' _chemical_formula_sum 'C27 H22 N2 O' _chemical_formula_weight 390.47 _chemical_name_systematic ; 1-Benzyl-2-[2-(benzyloxy)phenyl]-1H-benzimidazole ; _symmetry_cell_setting Orthorhombic _symmetry_space_group_name_Hall 'P 2c -2n' _symmetry_space_group_name_H-M 'P n a 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.2724(9) _cell_length_b 15.8390(13) _cell_length_c 12.9779(11) _cell_measurement_reflns_used 2398 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 20.412 _cell_measurement_theta_min 2.363 _cell_volume 2111.6(3) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT _computing_molecular_graphics 'SHELXTL (Sheldrick, 2000)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker APEX area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0290 _diffrn_reflns_av_sigmaI/netI 0.0289 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 11837 _diffrn_reflns_theta_full 27.00 _diffrn_reflns_theta_max 27.00 _diffrn_reflns_theta_min 2.03 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.075 _exptl_absorpt_correction_T_max 0.9793 _exptl_absorpt_correction_T_min 0.9613 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.228 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 824 _exptl_crystal_size_max 0.53 _exptl_crystal_size_mid 0.33 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.156 _refine_diff_density_min -0.128 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.079 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 271 _refine_ls_number_reflns 2400 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.078 _refine_ls_R_factor_all 0.0542 _refine_ls_R_factor_gt 0.0446 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0548P)^2^+0.1914P] where P= (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1047 _refine_ls_wR_factor_ref 0.1101 _reflns_number_gt 2048 _reflns_number_total 2400 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file rn6057.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' 'x+1/2, -y+1/2, z' '-x+1/2, y+1/2, z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.31914(17) 0.20469(12) 0.74398(18) 0.0595(5) Uani d . 1 O N1 0.42036(19) 0.02756(13) 0.73542(16) 0.0441(5) Uani d . 1 N N2 0.4892(2) 0.06866(15) 0.57967(17) 0.0476(5) Uani d . 1 N C1 0.2294(2) 0.17863(17) 0.6738(2) 0.0477(6) Uani d . 1 C C2 0.1143(3) 0.22025(19) 0.6510(3) 0.0599(8) Uani d . 1 C H2 0.0931 0.2702 0.6847 0.072 Uiso calc R 1 H C3 0.0319(3) 0.1870(2) 0.5784(3) 0.0651(8) Uani d . 1 C H3 -0.0457 0.2148 0.5635 0.078 Uiso calc R 1 H C4 0.0614(3) 0.1140(2) 0.5275(2) 0.0650(8) Uani d . 1 C H4 0.0042 0.0923 0.4788 0.078 Uiso calc R 1 H C5 0.1773(3) 0.0725(2) 0.5490(2) 0.0536(7) Uani d . 1 C H5 0.1980 0.0230 0.5140 0.064 Uiso calc R 1 H C6 0.2619(2) 0.10418(16) 0.6221(2) 0.0441(6) Uani d . 1 C C7 0.3909(2) 0.06495(15) 0.64357(19) 0.0417(5) Uani d . 1 C C8 0.5920(2) 0.03244(15) 0.6335(2) 0.0434(5) Uani d . 1 C C9 0.7226(2) 0.02415(19) 0.6064(2) 0.0545(7) Uani d . 1 C H9 0.7528 0.0425 0.5426 0.065 Uiso calc R 1 H C10 0.8051(3) -0.0120(2) 0.6768(2) 0.0589(7) Uani d . 1 C H10 0.8925 -0.0186 0.6599 0.071 Uiso calc R 1 H C11 0.7616(3) -0.03901(18) 0.7731(2) 0.0583(7) Uani d . 1 C H11 0.8205 -0.0637 0.8184 0.070 Uiso calc R 1 H C12 0.6331(3) -0.03019(17) 0.8030(2) 0.0521(6) Uani d . 1 C H12 0.6039 -0.0477 0.8674 0.063 Uiso calc R 1 H C13 0.5502(2) 0.00630(14) 0.7311(2) 0.0419(5) Uani d . 1 C C14 0.2688(2) -0.07627(16) 0.8141(2) 0.0448(6) Uani d . 1 C C15 0.1561(3) -0.0857(2) 0.7603(3) 0.0726(9) Uani d . 1 C H15 0.1190 -0.0392 0.7279 0.087 Uiso calc R 1 H C16 0.0962(4) -0.1635(2) 0.7531(4) 0.0907(13) Uani d . 1 C H16 0.0194 -0.1690 0.7157 0.109 Uiso calc R 1 H C17 0.1488(4) -0.2319(2) 0.8003(4) 0.0861(11) Uani d . 1 C H17 0.1095 -0.2845 0.7937 0.103 Uiso calc R 1 H C18 0.2592(4) -0.2232(2) 0.8574(4) 0.0819(11) Uani d . 1 C H18 0.2944 -0.2697 0.8910 0.098 Uiso calc R 1 H C19 0.3190(3) -0.14526(18) 0.8653(3) 0.0604(8) Uani d . 1 C H19 0.3935 -0.1393 0.9054 0.072 Uiso calc R 1 H C20 0.4008(3) 0.2843(2) 0.8816(3) 0.0637(8) Uani d . 1 C C21 0.4340(4) 0.2161(2) 0.9427(3) 0.0815(10) Uani d . 1 C H21 0.3893 0.1654 0.9349 0.098 Uiso calc R 1 H C22 0.5324(4) 0.2217(3) 1.0150(4) 0.0997(13) Uani d . 1 C H22 0.5530 0.1754 1.0558 0.120 Uiso calc R 1 H C23 0.5999(4) 0.2967(4) 1.0263(4) 0.1038(16) Uani d . 1 C H23 0.6668 0.3011 1.0743 0.125 Uiso calc R 1 H C24 0.5678(5) 0.3634(4) 0.9669(4) 0.1100(18) Uani d . 1 C H24 0.6131 0.4138 0.9745 0.132 Uiso calc R 1 H C25 0.4700(4) 0.3585(2) 0.8957(3) 0.0851(12) Uani d . 1 C H25 0.4496 0.4056 0.8561 0.102 Uiso calc R 1 H C26 0.3329(3) 0.00919(17) 0.8218(2) 0.0483(6) Uani d . 1 C H26A 0.2659 0.0523 0.8247 0.058 Uiso calc R 1 H H26B 0.3820 0.0120 0.8856 0.058 Uiso calc R 1 H C27 0.2953(3) 0.27833(19) 0.8043(3) 0.0653(8) Uani d . 1 C H27A 0.2115 0.2741 0.8383 0.078 Uiso calc R 1 H H27B 0.2950 0.3281 0.7607 0.078 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0507(10) 0.0538(11) 0.0741(14) 0.0051(8) -0.0043(10) -0.0136(10) N1 0.0430(11) 0.0476(12) 0.0418(11) 0.0000(9) 0.0054(9) 0.0045(9) N2 0.0423(11) 0.0574(13) 0.0430(12) 0.0029(9) 0.0040(9) -0.0003(10) C1 0.0422(13) 0.0511(15) 0.0498(15) -0.0028(11) 0.0044(12) 0.0060(12) C2 0.0517(15) 0.0619(17) 0.066(2) 0.0107(13) 0.0095(14) 0.0089(15) C3 0.0439(15) 0.091(2) 0.0599(19) 0.0144(15) 0.0026(14) 0.0101(18) C4 0.0430(15) 0.098(2) 0.0543(18) -0.0055(15) -0.0043(13) 0.0044(17) C5 0.0493(15) 0.0681(18) 0.0433(14) -0.0036(13) 0.0042(12) -0.0018(13) C6 0.0388(12) 0.0515(14) 0.0420(13) -0.0009(10) 0.0059(11) 0.0054(12) C7 0.0450(13) 0.0434(13) 0.0365(12) -0.0037(10) 0.0024(11) -0.0025(11) C8 0.0414(12) 0.0471(14) 0.0415(13) 0.0030(10) 0.0013(11) -0.0051(12) C9 0.0479(14) 0.0732(19) 0.0423(15) 0.0057(13) 0.0044(12) -0.0019(13) C10 0.0444(14) 0.0752(19) 0.0570(18) 0.0090(13) 0.0036(13) -0.0078(15) C11 0.0543(16) 0.0620(17) 0.0587(17) 0.0122(13) -0.0091(14) 0.0025(14) C12 0.0573(15) 0.0538(16) 0.0452(15) 0.0013(13) -0.0015(13) 0.0053(12) C13 0.0426(12) 0.0396(12) 0.0435(13) -0.0004(10) 0.0009(11) -0.0032(11) C14 0.0414(13) 0.0494(14) 0.0437(14) 0.0008(10) 0.0038(11) 0.0032(11) C15 0.0651(18) 0.071(2) 0.081(2) -0.0081(15) -0.0186(17) 0.0248(18) C16 0.079(2) 0.084(2) 0.108(3) -0.0255(19) -0.044(2) 0.017(2) C17 0.083(2) 0.058(2) 0.117(3) -0.0172(18) -0.016(3) -0.002(2) C18 0.081(2) 0.0506(18) 0.114(3) 0.0027(16) -0.020(2) 0.0137(19) C19 0.0546(15) 0.0569(17) 0.070(2) 0.0018(13) -0.0137(15) 0.0064(15) C20 0.0674(18) 0.0593(17) 0.0643(19) -0.0070(15) 0.0112(15) -0.0144(16) C21 0.084(2) 0.075(2) 0.086(3) -0.0066(19) -0.013(2) -0.015(2) C22 0.098(3) 0.120(4) 0.081(3) 0.003(3) -0.012(2) -0.016(3) C23 0.074(2) 0.169(5) 0.068(3) -0.025(3) 0.003(2) -0.044(3) C24 0.112(4) 0.138(5) 0.080(3) -0.060(3) 0.025(3) -0.047(3) C25 0.105(3) 0.079(2) 0.072(2) -0.024(2) 0.020(2) -0.025(2) C26 0.0516(14) 0.0515(15) 0.0418(14) -0.0006(11) 0.0100(12) 0.0028(12) C27 0.0706(18) 0.0500(16) 0.075(2) 0.0024(14) 0.0070(18) -0.0084(15) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.361(3) O1 C27 1.426(3) N1 C7 1.365(3) N1 C13 1.377(3) N1 C26 1.466(3) N2 C7 1.308(3) N2 C8 1.391(3) C1 C2 1.385(4) C1 C6 1.397(4) C2 C3 1.372(4) C2 H2 0.9300 C3 C4 1.365(5) C3 H3 0.9300 C4 C5 1.389(4) C4 H4 0.9300 C5 C6 1.381(4) C5 H5 0.9300 C6 C7 1.490(3) C8 C9 1.393(3) C8 C13 1.400(4) C9 C10 1.372(4) C9 H9 0.9300 C10 C11 1.395(4) C10 H10 0.9300 C11 C12 1.383(4) C11 H11 0.9300 C12 C13 1.388(4) C12 H12 0.9300 C14 C15 1.360(4) C14 C19 1.379(4) C14 C26 1.509(4) C15 C16 1.380(5) C15 H15 0.9300 C16 C17 1.357(5) C16 H16 0.9300 C17 C18 1.362(5) C17 H17 0.9300 C18 C19 1.383(5) C18 H18 0.9300 C19 H19 0.9300 C20 C21 1.383(5) C20 C25 1.385(5) C20 C27 1.480(5) C21 C22 1.382(6) C21 H21 0.9300 C22 C23 1.384(7) C22 H22 0.9300 C23 C24 1.348(7) C23 H23 0.9300 C24 C25 1.367(7) C24 H24 0.9300 C25 H25 0.9300 C26 H26A 0.9700 C26 H26B 0.9700 C27 H27A 0.9700 C27 H27B 0.9700 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 O1 C27 120.0(2) C7 N1 C13 106.6(2) C7 N1 C26 128.2(2) C13 N1 C26 125.2(2) C7 N2 C8 104.4(2) O1 C1 C2 125.2(3) O1 C1 C6 114.5(2) C2 C1 C6 120.2(2) C3 C2 C1 119.4(3) C3 C2 H2 120.3 C1 C2 H2 120.3 C4 C3 C2 121.3(3) C4 C3 H3 119.3 C2 C3 H3 119.3 C3 C4 C5 119.7(3) C3 C4 H4 120.2 C5 C4 H4 120.2 C6 C5 C4 120.3(3) C6 C5 H5 119.8 C4 C5 H5 119.8 C5 C6 C1 119.1(2) C5 C6 C7 122.4(2) C1 C6 C7 118.4(2) N2 C7 N1 113.7(2) N2 C7 C6 123.3(2) N1 C7 C6 122.8(2) N2 C8 C9 130.0(2) N2 C8 C13 110.1(2) C9 C8 C13 119.8(2) C10 C9 C8 117.7(3) C10 C9 H9 121.1 C8 C9 H9 121.1 C9 C10 C11 121.8(3) C9 C10 H10 119.1 C11 C10 H10 119.1 C12 C11 C10 121.8(3) C12 C11 H11 119.1 C10 C11 H11 119.1 C11 C12 C13 116.0(3) C11 C12 H12 122.0 C13 C12 H12 122.0 N1 C13 C12 132.0(2) N1 C13 C8 105.1(2) C12 C13 C8 122.9(2) C15 C14 C19 118.6(3) C15 C14 C26 120.3(2) C19 C14 C26 121.0(2) C14 C15 C16 120.9(3) C14 C15 H15 119.6 C16 C15 H15 119.6 C17 C16 C15 120.3(3) C17 C16 H16 119.9 C15 C16 H16 119.9 C16 C17 C18 119.8(3) C16 C17 H17 120.1 C18 C17 H17 120.1 C17 C18 C19 120.0(3) C17 C18 H18 120.0 C19 C18 H18 120.0 C14 C19 C18 120.4(3) C14 C19 H19 119.8 C18 C19 H19 119.8 C21 C20 C25 117.4(4) C21 C20 C27 121.3(3) C25 C20 C27 121.3(3) C22 C21 C20 121.3(4) C22 C21 H21 119.4 C20 C21 H21 119.4 C21 C22 C23 119.6(5) C21 C22 H22 120.2 C23 C22 H22 120.2 C24 C23 C22 119.3(4) C24 C23 H23 120.4 C22 C23 H23 120.4 C23 C24 C25 121.5(4) C23 C24 H24 119.3 C25 C24 H24 119.3 C24 C25 C20 121.0(5) C24 C25 H25 119.5 C20 C25 H25 119.5 N1 C26 C14 113.2(2) N1 C26 H26A 108.9 C14 C26 H26A 108.9 N1 C26 H26B 108.9 C14 C26 H26B 108.9 H26A C26 H26B 107.7 O1 C27 C20 107.4(2) O1 C27 H27A 110.2 C20 C27 H27A 110.2 O1 C27 H27B 110.2 C20 C27 H27B 110.2 H27A C27 H27B 108.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C27 O1 C1 C2 2.9(4) C27 O1 C1 C6 -177.9(3) O1 C1 C2 C3 -179.9(3) C6 C1 C2 C3 0.9(4) C1 C2 C3 C4 -0.4(5) C2 C3 C4 C5 -0.3(5) C3 C4 C5 C6 0.6(4) C4 C5 C6 C1 -0.2(4) C4 C5 C6 C7 -176.2(3) O1 C1 C6 C5 -179.8(2) C2 C1 C6 C5 -0.6(4) O1 C1 C6 C7 -3.6(3) C2 C1 C6 C7 175.6(3) C8 N2 C7 N1 -1.1(3) C8 N2 C7 C6 174.0(2) C13 N1 C7 N2 1.0(3) C26 N1 C7 N2 -176.6(2) C13 N1 C7 C6 -174.1(2) C26 N1 C7 C6 8.3(4) C5 C6 C7 N2 71.1(3) C1 C6 C7 N2 -105.0(3) C5 C6 C7 N1 -114.2(3) C1 C6 C7 N1 69.7(3) C7 N2 C8 C9 -175.4(3) C7 N2 C8 C13 0.7(3) N2 C8 C9 C10 177.6(3) C13 C8 C9 C10 1.7(4) C8 C9 C10 C11 -0.6(4) C9 C10 C11 C12 -0.6(5) C10 C11 C12 C13 0.6(4) C7 N1 C13 C12 177.5(3) C26 N1 C13 C12 -4.8(4) C7 N1 C13 C8 -0.5(2) C26 N1 C13 C8 177.2(2) C11 C12 C13 N1 -177.1(3) C11 C12 C13 C8 0.5(4) N2 C8 C13 N1 -0.2(3) C9 C8 C13 N1 176.5(2) N2 C8 C13 C12 -178.3(2) C9 C8 C13 C12 -1.7(4) C19 C14 C15 C16 -2.9(5) C26 C14 C15 C16 -179.7(3) C14 C15 C16 C17 0.3(7) C15 C16 C17 C18 1.8(7) C16 C17 C18 C19 -1.4(7) C15 C14 C19 C18 3.3(5) C26 C14 C19 C18 -179.9(3) C17 C18 C19 C14 -1.2(6) C25 C20 C21 C22 0.0(5) C27 C20 C21 C22 -179.9(3) C20 C21 C22 C23 -0.5(6) C21 C22 C23 C24 0.5(7) C22 C23 C24 C25 -0.1(7) C23 C24 C25 C20 -0.4(6) C21 C20 C25 C24 0.4(5) C27 C20 C25 C24 -179.6(4) C7 N1 C26 C14 89.2(3) C13 N1 C26 C14 -88.0(3) C15 C14 C26 N1 -86.5(3) C19 C14 C26 N1 96.8(3) C1 O1 C27 C20 173.0(2) C21 C20 C27 O1 -50.1(4) C25 C20 C27 O1 129.9(3)